data_07I
#

_chem_comp.id                                   07I
_chem_comp.name                                 "Spliceostatin E (form I)"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C26 H37 N O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "[(Z,2S)-5-[[(2R,3R,5S,6S)-2,5-dimethyl-6-[(2E,4E)-3-methyl-5-[(2S)-4-methyl-6-oxidanylidene-2,3-dihydropyran-2-yl]penta-2,4-dienyl]oxan-3-yl]amino]-5-oxidanylidene-pent-3-en-2-yl] ethanoate; [(Z,2S)-5-[[(2R,3R,5S,6S)-2,5-dimethyl-6-[(2E,4E)-3-methyl-5-[(2S)-4-methyl-6-oxo-2,3-dihydropyran-2-yl]penta-2,4-dienyl]oxan-3-yl]amino]-5-oxopent-3-en-2-yl] acetate; 90123658"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-06-01
_chem_comp.pdbx_modified_date                   2021-07-30
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       459.575
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    07I
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7OPI
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
07I  C1   C1   C  0  1  N  N  S  -16.563  42.949  -35.764    1.509   0.767  -0.838  C1   07I   1  
07I  O1   O1   O  0  1  N  N  N  -12.071  49.793  -41.661   -8.136  -2.513  -0.384  O1   07I   2  
07I  C2   C2   C  0  1  N  N  N  -16.914  42.117  -34.533    2.397  -0.162  -1.671  C2   07I   3  
07I  O2   O2   O  0  1  N  N  N  -13.994  48.928  -41.070   -6.870  -0.697  -0.019  O2   07I   4  
07I  C3   C3   C  0  1  N  N  R  -17.120  42.929  -33.247    2.489  -1.523  -0.973  C3   07I   5  
07I  C5   C4   C  0  1  N  N  S  -17.412  44.212  -35.736    0.136   0.116  -0.652  C5   07I   6  
07I  C6   C5   C  0  1  N  N  N  -17.617  44.857  -37.108   -0.738   1.011   0.230  C6   07I   7  
07I  C7   C6   C  0  1  N  N  N  -16.718  46.017  -37.418   -2.127   0.432   0.312  C7   07I   8  
07I  C8   C7   C  0  1  N  N  N  -16.712  46.443  -38.684   -3.175   1.168  -0.040  C8   07I   9  
07I  C9   C8   C  0  1  N  N  N  -17.518  45.754  -39.750   -2.993   2.624  -0.383  C9   07I  10  
07I  C10  C9   C  0  1  N  N  N  -15.978  47.633  -39.073   -4.515   0.562  -0.095  C10  07I  11  
07I  N    N1   N  0  1  N  N  N  -16.079  42.624  -32.272    3.133  -1.361   0.333  N    07I  12  
07I  C    C10  C  0  1  N  N  N  -15.066  43.244  -35.829    2.154   1.001   0.530  C    07I  13  
07I  O    O3   O  0  1  N  N  N  -17.008  45.057  -34.651    0.296  -1.159  -0.026  O    07I  14  
07I  C11  C11  C  0  1  N  N  N  -16.080  48.040  -40.326   -5.563   1.298  -0.448  C11  07I  15  
07I  C12  C12  C  0  1  N  N  S  -15.420  49.245  -40.918   -6.935   0.677  -0.504  C12  07I  16  
07I  C13  C13  C  0  1  N  N  N  -16.084  49.429  -42.284   -7.894   1.469   0.386  C13  07I  17  
07I  C14  C14  C  0  1  N  N  N  -15.216  50.210  -43.230   -9.182   0.714   0.570  C14  07I  18  
07I  C15  C15  C  0  1  N  N  N  -13.908  50.320  -43.010   -9.257  -0.597   0.377  C15  07I  19  
07I  C16  C16  C  0  1  N  N  N  -13.248  49.688  -41.902   -8.060  -1.350  -0.038  C16  07I  20  
07I  C17  C17  C  0  1  N  N  N  -15.904  50.860  -44.395  -10.419   1.467   0.986  C17  07I  21  
07I  C18  C18  C  0  1  N  N  N  -16.613  45.252  -32.320    1.157  -3.417  -0.032  C18  07I  22  
07I  C19  C19  C  0  1  N  N  N  -15.949  41.413  -31.707    4.468  -1.195   0.409  C19  07I  23  
07I  C20  C20  C  0  1  N  N  N  -14.766  41.260  -30.829    5.115  -1.033   1.721  C20  07I  24  
07I  C21  C21  C  0  1  N  N  N  -14.395  40.173  -30.169    6.408  -0.729   1.792  C21  07I  25  
07I  C22  C22  C  0  1  N  N  S  -15.088  38.845  -30.203    7.144  -0.275   0.558  C22  07I  26  
07I  C23  C23  C  0  1  N  N  N  -15.794  38.470  -28.920    8.158  -1.344   0.146  C23  07I  27  
07I  C24  C24  C  0  1  N  N  N  -13.588  37.671  -31.685    8.009   1.817  -0.187  C24  07I  28  
07I  C25  C25  C  0  1  N  N  N  -12.591  36.566  -31.754    8.721   3.128   0.029  C25  07I  29  
07I  C4   C26  C  0  1  N  N  R  -17.319  44.442  -33.383    1.078  -2.085  -0.782  C4   07I  30  
07I  O3   O4   O  0  1  N  N  N  -16.771  40.506  -31.906    5.138  -1.178  -0.605  O3   07I  31  
07I  O4   O5   O  0  1  N  N  N  -14.057  37.821  -30.429    7.838   0.969   0.839  O4   07I  32  
07I  O5   O6   O  0  1  N  N  N  -13.946  38.349  -32.604    7.593   1.530  -1.284  O5   07I  33  
07I  H1   H1   H  0  1  N  N  N  -16.837  42.370  -36.658    1.393   1.720  -1.355  H1   07I  34  
07I  H5   H5   H  0  1  N  N  N  -18.414  43.854  -35.458   -0.340  -0.013  -1.624  H5   07I  35  
07I  H6   H6   H  0  1  N  N  N  -18.657  45.210  -37.164   -0.308   1.068   1.230  H6   07I  36  
07I  H7   H7   H  0  1  N  N  N  -17.450  44.085  -37.874   -0.786   2.011  -0.202  H7   07I  37  
07I  H8   H8   H  0  1  N  N  N  -16.108  46.483  -36.658   -2.270  -0.581   0.658  H8   07I  38  
07I  H9   H9   H  0  1  N  N  N  -18.019  44.874  -39.320   -2.788   2.724  -1.449  H9   07I  39  
07I  H10  H10  H  0  1  N  N  N  -18.273  46.449  -40.145   -3.902   3.173  -0.135  H10  07I  40  
07I  H11  H11  H  0  1  N  N  N  -16.851  45.435  -40.565   -2.157   3.030   0.187  H11  07I  41  
07I  H12  H12  H  0  1  N  N  N  -15.368  48.169  -38.361   -4.646  -0.482   0.150  H12  07I  42  
07I  H13  H13  H  0  1  N  N  N  -15.437  43.346  -32.014    2.598  -1.374   1.142  H13  07I  43  
07I  H14  H14  H  0  1  N  N  N  -14.506  42.298  -35.847    2.002   0.123   1.158  H14  07I  44  
07I  H15  H15  H  0  1  N  N  N  -14.845  43.818  -36.741    3.222   1.177   0.403  H15  07I  45  
07I  H16  H16  H  0  1  N  N  N  -14.769  43.829  -34.946    1.696   1.870   1.003  H16  07I  46  
07I  H17  H17  H  0  1  N  N  N  -16.698  47.447  -40.984   -5.432   2.341  -0.694  H17  07I  47  
07I  H18  H18  H  0  1  N  N  N  -15.573  50.133  -40.288   -7.297   0.684  -1.533  H18  07I  48  
07I  H19  H19  H  0  1  N  N  N  -17.034  49.966  -42.148   -7.430   1.634   1.359  H19  07I  49  
07I  H20  H20  H  0  1  N  N  N  -16.282  48.438  -42.719   -8.107   2.431  -0.079  H20  07I  50  
07I  H21  H21  H  0  1  N  N  N  -13.317  50.910  -43.695  -10.196  -1.111   0.524  H21  07I  51  
07I  H22  H22  H  0  1  N  N  N  -16.979  50.627  -44.364  -11.255   0.772   1.073  H22  07I  52  
07I  H23  H23  H  0  1  N  N  N  -15.764  51.950  -44.342  -10.246   1.949   1.948  H23  07I  53  
07I  H24  H24  H  0  1  N  N  N  -15.474  50.480  -45.333  -10.653   2.224   0.237  H24  07I  54  
07I  H25  H25  H  0  1  N  N  N  -16.821  44.820  -31.330    0.152  -3.817   0.105  H25  07I  55  
07I  H26  H26  H  0  1  N  N  N  -15.529  45.236  -32.507    1.754  -4.123  -0.609  H26  07I  56  
07I  H27  H27  H  0  1  N  N  N  -16.975  46.290  -32.350    1.621  -3.259   0.941  H27  07I  57  
07I  H28  H28  H  0  1  N  N  N  -14.137  42.130  -30.714    4.540  -1.160   2.626  H28  07I  58  
07I  H29  H29  H  0  1  N  N  N  -13.513  40.251  -29.550    6.930  -0.808   2.734  H29  07I  59  
07I  H30  H30  H  0  1  N  N  N  -15.812  38.832  -31.031    6.432  -0.118  -0.253  H30  07I  60  
07I  H31  H31  H  0  1  N  N  N  -16.580  39.209  -28.704    7.637  -2.277  -0.065  H31  07I  61  
07I  H32  H32  H  0  1  N  N  N  -16.247  37.474  -29.029    8.690  -1.015  -0.746  H32  07I  62  
07I  H33  H33  H  0  1  N  N  N  -15.068  38.454  -28.093    8.870  -1.500   0.957  H33  07I  63  
07I  H34  H34  H  0  1  N  N  N  -12.227  36.463  -32.787    9.022   3.210   1.073  H34  07I  64  
07I  H35  H35  H  0  1  N  N  N  -11.745  36.793  -31.089    9.605   3.170  -0.608  H35  07I  65  
07I  H36  H36  H  0  1  N  N  N  -13.064  35.625  -31.437    8.052   3.951  -0.222  H36  07I  66  
07I  H2   H2   H  0  1  N  N  N  -17.844  41.568  -34.744    1.963  -0.289  -2.662  H2   07I  67  
07I  H3   H3   H  0  1  N  N  N  -16.097  41.401  -34.359    3.394   0.270  -1.760  H3   07I  68  
07I  H4   H4   H  0  1  N  N  N  -18.059  42.552  -32.816    3.075  -2.207  -1.587  H4   07I  69  
07I  H37  H37  H  0  1  N  N  N  -18.393  44.609  -33.215    0.614  -2.243  -1.756  H37  07I  70  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
07I  C17  C14  SING  N  N   1  
07I  C14  C15  DOUB  N  N   2  
07I  C14  C13  SING  N  N   3  
07I  C15  C16  SING  N  N   4  
07I  C13  C12  SING  N  N   5  
07I  C16  O1   DOUB  N  N   6  
07I  C16  O2   SING  N  N   7  
07I  O2   C12  SING  N  N   8  
07I  C12  C11  SING  N  N   9  
07I  C11  C10  DOUB  N  E  10  
07I  C9   C8   SING  N  N  11  
07I  C10  C8   SING  N  N  12  
07I  C8   C7   DOUB  N  E  13  
07I  C7   C6   SING  N  N  14  
07I  C6   C5   SING  N  N  15  
07I  C    C1   SING  N  N  16  
07I  C1   C5   SING  N  N  17  
07I  C1   C2   SING  N  N  18  
07I  C5   O    SING  N  N  19  
07I  O    C4   SING  N  N  20  
07I  C2   C3   SING  N  N  21  
07I  C4   C3   SING  N  N  22  
07I  C4   C18  SING  N  N  23  
07I  C3   N    SING  N  N  24  
07I  O5   C24  DOUB  N  N  25  
07I  N    C19  SING  N  N  26  
07I  O3   C19  DOUB  N  N  27  
07I  C25  C24  SING  N  N  28  
07I  C19  C20  SING  N  N  29  
07I  C24  O4   SING  N  N  30  
07I  C20  C21  DOUB  N  Z  31  
07I  O4   C22  SING  N  N  32  
07I  C22  C21  SING  N  N  33  
07I  C22  C23  SING  N  N  34  
07I  C1   H1   SING  N  N  35  
07I  C5   H5   SING  N  N  36  
07I  C6   H6   SING  N  N  37  
07I  C6   H7   SING  N  N  38  
07I  C7   H8   SING  N  N  39  
07I  C9   H9   SING  N  N  40  
07I  C9   H10  SING  N  N  41  
07I  C9   H11  SING  N  N  42  
07I  C10  H12  SING  N  N  43  
07I  N    H13  SING  N  N  44  
07I  C    H14  SING  N  N  45  
07I  C    H15  SING  N  N  46  
07I  C    H16  SING  N  N  47  
07I  C11  H17  SING  N  N  48  
07I  C12  H18  SING  N  N  49  
07I  C13  H19  SING  N  N  50  
07I  C13  H20  SING  N  N  51  
07I  C15  H21  SING  N  N  52  
07I  C17  H22  SING  N  N  53  
07I  C17  H23  SING  N  N  54  
07I  C17  H24  SING  N  N  55  
07I  C18  H25  SING  N  N  56  
07I  C18  H26  SING  N  N  57  
07I  C18  H27  SING  N  N  58  
07I  C20  H28  SING  N  N  59  
07I  C21  H29  SING  N  N  60  
07I  C22  H30  SING  N  N  61  
07I  C23  H31  SING  N  N  62  
07I  C23  H32  SING  N  N  63  
07I  C23  H33  SING  N  N  64  
07I  C25  H34  SING  N  N  65  
07I  C25  H35  SING  N  N  66  
07I  C25  H36  SING  N  N  67  
07I  C2   H2   SING  N  N  68  
07I  C2   H3   SING  N  N  69  
07I  C3   H4   SING  N  N  70  
07I  C4   H37  SING  N  N  71  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
07I  InChI             InChI                 1.03   "InChI=1S/C26H37NO6/c1-16(7-10-22-13-17(2)14-26(30)33-22)8-11-24-18(3)15-23(20(5)32-24)27-25(29)12-9-19(4)31-21(6)28/h7-10,12,14,18-20,22-24H,11,13,15H2,1-6H3,(H,27,29)/b10-7+,12-9-,16-8+/t18-,19-,20+,22+,23+,24-/m0/s1"  
07I  InChIKey          InChI                 1.03   CDYGVGCTHMNLJY-FLMQFJOVSA-N  
07I  SMILES_CANONICAL  CACTVS                3.385  "C[C@H]1C[C@@H](NC(=O)\C=C/[C@H](C)OC(C)=O)[C@@H](C)O[C@H]1C/C=C(C)/C=C/[C@@H]2CC(=CC(=O)O2)C"  
07I  SMILES            CACTVS                3.385  "C[CH]1C[CH](NC(=O)C=C[CH](C)OC(C)=O)[CH](C)O[CH]1CC=C(C)C=C[CH]2CC(=CC(=O)O2)C"  
07I  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C[C@H]1C[C@H]([C@H](O[C@H]1C/C=C(\C)/C=C/[C@@H]2CC(=CC(=O)O2)C)C)NC(=O)/C=C\[C@H](C)OC(=O)C"  
07I  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1CC(C(OC1CC=C(C)C=CC2CC(=CC(=O)O2)C)C)NC(=O)C=CC(C)OC(=O)C"  
#
_pdbx_chem_comp_identifier.comp_id          07I
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "[(~{Z},2~{S})-5-[[(2~{R},3~{R},5~{S},6~{S})-2,5-dimethyl-6-[(2~{E},4~{E})-3-methyl-5-[(2~{S})-4-methyl-6-oxidanylidene-2,3-dihydropyran-2-yl]penta-2,4-dienyl]oxan-3-yl]amino]-5-oxidanylidene-pent-3-en-2-yl] ethanoate"
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  07I  "[(Z,2S)-5-[[(2R,3R,5S,6S)-2,5-dimethyl-6-[(2E,4E)-3-methyl-5-[(2S)-4-methyl-6-oxidanylidene-2,3-dihydropyran-2-yl]penta-2,4-dienyl]oxan-3-yl]amino]-5-oxidanylidene-pent-3-en-2-yl] ethanoate"  PDB      ?  
2  07I  "[(Z,2S)-5-[[(2R,3R,5S,6S)-2,5-dimethyl-6-[(2E,4E)-3-methyl-5-[(2S)-4-methyl-6-oxo-2,3-dihydropyran-2-yl]penta-2,4-dienyl]oxan-3-yl]amino]-5-oxopent-3-en-2-yl] acetate"                         PUBCHEM  ?  
3  07I  90123658                                                                                                                                                                                         PUBCHEM  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
07I  "Create component"  2021-06-01  PDBE  
07I  "Initial release"   2021-08-04  RCSB  
##
