data_7VI
# 
_chem_comp.id                                    7VI 
_chem_comp.name                                  "N-[(benzyloxy)carbonyl]-L-valyl-3-cyclopropyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-alaninamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C26 H38 N4 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-08-23 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        502.603 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     7VI 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7RVO 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
7VI N   N1  N 0 1 N N N N N N 7.662  1.019  28.071 -2.984  0.581  -0.188 N   7VI 1  
7VI C   C1  C 0 1 Y N N N N N 4.850  0.417  32.702 -9.077  -1.462 1.517  C   7VI 2  
7VI O   O1  O 0 1 N N N N N N 5.957  -0.520 28.486 -5.295  0.289  -0.051 O   7VI 3  
7VI C1  C2  C 0 1 Y N N N N N 5.038  -0.784 33.382 -9.739  -0.362 2.028  C1  7VI 4  
7VI C10 C3  C 0 1 N N N N N N 9.696  2.271  28.375 -1.604  2.265  -1.302 C10 7VI 5  
7VI C11 C4  C 0 1 N N N N N N 9.708  1.675  29.779 -2.761  2.741  -2.182 C11 7VI 6  
7VI C12 C5  C 0 1 N N N N N N 10.377 3.636  28.313 -1.597  3.059  0.005  C12 7VI 7  
7VI C13 C6  C 0 1 N N S N N N 7.785  3.907  24.451 1.691   -0.609 -0.156 C13 7VI 8  
7VI C14 C7  C 0 1 N N N N N N 9.136  4.496  24.195 2.976   -0.288 -0.874 C14 7VI 9  
7VI C15 C8  C 0 1 N N N N N N 6.677  4.896  24.086 1.510   -2.127 -0.087 C15 7VI 10 
7VI C16 C9  C 0 1 N N N N N N 5.339  4.191  24.249 0.272   -2.455 0.750  C16 7VI 11 
7VI C17 C10 C 0 1 N N S N N N 11.143 4.424  22.819 5.400   -0.423 -1.085 C17 7VI 12 
7VI C18 C11 C 0 1 N N N N N N 11.155 5.172  21.487 5.645   -1.463 -2.180 C18 7VI 13 
7VI C19 C12 C 0 1 N N N N N N 12.079 3.215  22.731 6.561   -0.447 -0.089 C19 7VI 14 
7VI C2  C13 C 0 1 Y N N N N N 5.122  -1.984 32.679 -9.370  0.911  1.634  C2  7VI 15 
7VI C20 C14 C 0 1 N N S N N N 12.265 2.535  24.079 6.366   0.660  0.949  C20 7VI 16 
7VI C21 C15 C 0 1 N N N N N N 13.044 3.449  25.008 6.455   2.051  0.280  C21 7VI 17 
7VI C22 C16 C 0 1 N N N N N N 14.131 2.607  25.651 7.169   2.880  1.370  C22 7VI 18 
7VI C23 C17 C 0 1 N N N N N N 13.170 1.328  23.966 7.502   0.655  1.948  C23 7VI 19 
7VI C24 C18 C 0 1 N N N N N N 5.145  3.323  23.003 -0.017  -3.931 1.035  C24 7VI 20 
7VI C25 C19 C 0 1 N N N N N N 4.322  4.600  23.187 -0.891  -3.157 0.045  C25 7VI 21 
7VI C3  C20 C 0 1 Y N N N N N 5.030  -2.003 31.287 -8.339  1.083  0.730  C3  7VI 22 
7VI C4  C21 C 0 1 Y N N N N N 4.837  -0.804 30.609 -7.677  -0.018 0.219  C4  7VI 23 
7VI C5  C22 C 0 1 Y N N N N N 4.741  0.399  31.315 -8.042  -1.290 0.617  C5  7VI 24 
7VI C6  C23 C 0 1 N N N N N N 4.713  -0.831 29.106 -6.552  0.169  -0.767 C6  7VI 25 
7VI C7  C24 C 0 1 N N N N N N 6.415  0.853  28.455 -4.184  0.463  -0.791 C7  7VI 26 
7VI C8  C25 C 0 1 N N S N N N 8.282  2.298  27.813 -1.776  0.776  -0.993 C8  7VI 27 
7VI C9  C26 C 0 1 N N N N N N 8.361  2.502  26.333 -0.577  0.280  -0.228 C9  7VI 28 
7VI N1  N2  N 0 1 N N N N N N 7.636  3.508  25.833 0.565   -0.015 -0.881 N1  7VI 29 
7VI N2  N3  N 0 1 N N N N N N 9.780  4.025  23.124 4.150   -0.734 -0.386 N2  7VI 30 
7VI N3  N4  N 0 1 N N N N N N 14.186 1.410  24.823 7.935   1.910  2.161  N3  7VI 31 
7VI O1  O2  O 0 1 N N N N N N 5.649  1.761  28.772 -4.263  0.513  -2.002 O1  7VI 32 
7VI O2  O3  O 0 1 N N N N N N 9.059  1.768  25.645 -0.639  0.146  0.976  O2  7VI 33 
7VI O3  O4  O 0 1 N N N N N N 9.608  5.349  24.941 2.953   0.371  -1.892 O3  7VI 34 
7VI O4  O5  O 0 1 N N N N N N 12.977 0.401  23.201 7.956   -0.336 2.480  O4  7VI 35 
7VI O5  O6  O 0 1 N N N N N N 12.466 5.632  21.173 5.856   -2.743 -1.582 O5  7VI 36 
7VI H1  H1  H 0 1 N N N N N N 8.222  0.200  27.949 -2.922  0.541  0.779  H1  7VI 37 
7VI H2  H2  H 0 1 N N N N N N 4.790  1.349  33.244 -9.365  -2.457 1.825  H2  7VI 38 
7VI H3  H3  H 0 1 N N N N N N 5.119  -0.785 34.459 -10.545 -0.496 2.735  H3  7VI 39 
7VI H4  H4  H 0 1 N N N N N N 10.281 1.594  27.736 -0.661  2.420  -1.827 H4  7VI 40 
7VI H5  H5  H 0 1 N N N N N N 10.738 1.665  30.165 -2.639  3.801  -2.402 H5  7VI 41 
7VI H6  H6  H 0 1 N N N N N N 9.074  2.283  30.441 -2.766  2.174  -3.113 H6  7VI 42 
7VI H7  H7  H 0 1 N N N N N N 9.320  0.646  29.744 -3.704  2.585  -1.657 H7  7VI 43 
7VI H8  H8  H 0 1 N N N N N N 11.392 3.559  28.730 -1.406  4.111  -0.209 H8  7VI 44 
7VI H9  H9  H 0 1 N N N N N N 10.435 3.969  27.266 -2.565  2.959  0.497  H9  7VI 45 
7VI H10 H10 H 0 1 N N N N N N 9.794  4.363  28.898 -0.815  2.674  0.661  H10 7VI 46 
7VI H11 H11 H 0 1 N N N N N N 7.669  3.020  23.810 1.728   -0.201 0.855  H11 7VI 47 
7VI H12 H12 H 0 1 N N N N N N 6.800  5.225  23.044 1.384   -2.524 -1.094 H12 7VI 48 
7VI H13 H13 H 0 1 N N N N N N 6.722  5.769  24.754 2.389   -2.577 0.374  H13 7VI 49 
7VI H14 H14 H 0 1 N N N N N N 5.007  3.835  25.235 0.026   -1.735 1.530  H14 7VI 50 
7VI H15 H15 H 0 1 N N N N N N 11.515 5.099  23.604 5.327   0.568  -1.534 H15 7VI 51 
7VI H16 H16 H 0 1 N N N N N N 10.477 6.035  21.553 4.778   -1.508 -2.839 H16 7VI 52 
7VI H17 H17 H 0 1 N Y N N N N 10.811 4.495  20.691 6.526   -1.182 -2.757 H17 7VI 53 
7VI H18 H18 H 0 1 N N N N N N 11.654 2.488  22.023 6.589   -1.415 0.413  H18 7VI 54 
7VI H19 H19 H 0 1 N N N N N N 13.060 3.552  22.366 7.499   -0.286 -0.620 H19 7VI 55 
7VI H20 H20 H 0 1 N N N N N N 5.260  -2.910 33.218 -9.888  1.771  2.033  H20 7VI 56 
7VI H21 H21 H 0 1 N N N N N N 11.294 2.261  24.518 5.409   0.541  1.457  H21 7VI 57 
7VI H22 H22 H 0 1 N N N N N N 13.494 4.274  24.436 7.052   2.008  -0.631 H22 7VI 58 
7VI H23 H23 H 0 1 N N N N N N 12.377 3.859  25.781 5.461   2.449  0.075  H23 7VI 59 
7VI H24 H24 H 0 1 N N N N N N 13.867 2.353  26.688 7.839   3.608  0.913  H24 7VI 60 
7VI H25 H25 H 0 1 N N N N N N 15.095 3.136  25.637 6.436   3.386  2.000  H25 7VI 61 
7VI H26 H26 H 0 1 N N N N N N 4.661  2.339  23.088 0.675   -4.667 0.626  H26 7VI 62 
7VI H27 H27 H 0 1 N N N N N N 5.930  3.280  22.234 -0.453  -4.181 2.002  H27 7VI 63 
7VI H28 H28 H 0 1 N N N N N N 4.515  5.475  22.549 -1.901  -2.898 0.361  H28 7VI 64 
7VI H29 H29 H 0 1 N N N N N N 3.245  4.534  23.403 -0.774  -3.385 -1.015 H29 7VI 65 
7VI H30 H30 H 0 1 N N N N N N 5.107  -2.934 30.745 -8.051  2.077  0.422  H30 7VI 66 
7VI H31 H31 H 0 1 N N N N N N 4.581  1.323  30.779 -7.525  -2.150 0.218  H31 7VI 67 
7VI H32 H32 H 0 1 N N N N N N 3.961  -0.092 28.794 -6.727  1.074  -1.349 H32 7VI 68 
7VI H33 H33 H 0 1 N N N N N N 4.394  -1.835 28.789 -6.509  -0.690 -1.436 H33 7VI 69 
7VI H34 H34 H 0 1 N N N N N N 7.710  3.114  28.279 -1.867  0.220  -1.926 H34 7VI 70 
7VI H35 H35 H 0 1 N N N N N N 6.985  3.989  26.420 0.640   0.165  -1.831 H35 7VI 71 
7VI H36 H36 H 0 1 N N N N N N 9.313  3.382  22.517 4.168   -1.262 0.428  H36 7VI 72 
7VI H37 H37 H 0 1 N N N N N N 14.910 0.723  24.891 8.662   2.144  2.760  H37 7VI 73 
7VI H38 H38 H 0 1 N N N N N N 12.450 6.093  20.343 6.018   -3.453 -2.218 H38 7VI 74 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
7VI O5  C18 SING N N 1  
7VI C18 C17 SING N N 2  
7VI C19 C17 SING N N 3  
7VI C19 C20 SING N N 4  
7VI C17 N2  SING N N 5  
7VI C24 C25 SING N N 6  
7VI C24 C16 SING N N 7  
7VI N2  C14 SING N N 8  
7VI C25 C16 SING N N 9  
7VI O4  C23 DOUB N N 10 
7VI C23 C20 SING N N 11 
7VI C23 N3  SING N N 12 
7VI C20 C21 SING N N 13 
7VI C15 C16 SING N N 14 
7VI C15 C13 SING N N 15 
7VI C14 C13 SING N N 16 
7VI C14 O3  DOUB N N 17 
7VI C13 N1  SING N N 18 
7VI N3  C22 SING N N 19 
7VI C21 C22 SING N N 20 
7VI O2  C9  DOUB N N 21 
7VI N1  C9  SING N N 22 
7VI C9  C8  SING N N 23 
7VI C8  N   SING N N 24 
7VI C8  C10 SING N N 25 
7VI N   C7  SING N N 26 
7VI C12 C10 SING N N 27 
7VI C10 C11 SING N N 28 
7VI C7  O   SING N N 29 
7VI C7  O1  DOUB N N 30 
7VI O   C6  SING N N 31 
7VI C6  C4  SING N N 32 
7VI C4  C3  DOUB Y N 33 
7VI C4  C5  SING Y N 34 
7VI C3  C2  SING Y N 35 
7VI C5  C   DOUB Y N 36 
7VI C2  C1  DOUB Y N 37 
7VI C   C1  SING Y N 38 
7VI N   H1  SING N N 39 
7VI C   H2  SING N N 40 
7VI C1  H3  SING N N 41 
7VI C10 H4  SING N N 42 
7VI C11 H5  SING N N 43 
7VI C11 H6  SING N N 44 
7VI C11 H7  SING N N 45 
7VI C12 H8  SING N N 46 
7VI C12 H9  SING N N 47 
7VI C12 H10 SING N N 48 
7VI C13 H11 SING N N 49 
7VI C15 H12 SING N N 50 
7VI C15 H13 SING N N 51 
7VI C16 H14 SING N N 52 
7VI C17 H15 SING N N 53 
7VI C18 H16 SING N N 54 
7VI C18 H17 SING N N 55 
7VI C19 H18 SING N N 56 
7VI C19 H19 SING N N 57 
7VI C2  H20 SING N N 58 
7VI C20 H21 SING N N 59 
7VI C21 H22 SING N N 60 
7VI C21 H23 SING N N 61 
7VI C22 H24 SING N N 62 
7VI C22 H25 SING N N 63 
7VI C24 H26 SING N N 64 
7VI C24 H27 SING N N 65 
7VI C25 H28 SING N N 66 
7VI C25 H29 SING N N 67 
7VI C3  H30 SING N N 68 
7VI C5  H31 SING N N 69 
7VI C6  H32 SING N N 70 
7VI C6  H33 SING N N 71 
7VI C8  H34 SING N N 72 
7VI N1  H35 SING N N 73 
7VI N2  H36 SING N N 74 
7VI N3  H37 SING N N 75 
7VI O5  H38 SING N N 76 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
7VI SMILES           ACDLabs              12.01 "CC(C)C(NC(=O)OCc1ccccc1)C(=O)NC(CC1CC1)C(=O)NC(CC1CCNC1=O)CO"                                                                                                                                                                   
7VI InChI            InChI                1.03  "InChI=1S/C26H38N4O6/c1-16(2)22(30-26(35)36-15-18-6-4-3-5-7-18)25(34)29-21(12-17-8-9-17)24(33)28-20(14-31)13-19-10-11-27-23(19)32/h3-7,16-17,19-22,31H,8-15H2,1-2H3,(H,27,32)(H,28,33)(H,29,34)(H,30,35)/t19-,20-,21-,22-/m0/s1" 
7VI InChIKey         InChI                1.03  OBXMCOOSINYKTR-CMOCDZPBSA-N                                                                                                                                                                                                      
7VI SMILES_CANONICAL CACTVS               3.385 "CC(C)[C@H](NC(=O)OCc1ccccc1)C(=O)N[C@@H](CC2CC2)C(=O)N[C@H](CO)C[C@@H]3CCNC3=O"                                                                                                                                                 
7VI SMILES           CACTVS               3.385 "CC(C)[CH](NC(=O)OCc1ccccc1)C(=O)N[CH](CC2CC2)C(=O)N[CH](CO)C[CH]3CCNC3=O"                                                                                                                                                       
7VI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)[C@@H](C(=O)N[C@@H](CC1CC1)C(=O)N[C@@H](C[C@@H]2CCNC2=O)CO)NC(=O)OCc3ccccc3"                                                                                                                                               
7VI SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)C(C(=O)NC(CC1CC1)C(=O)NC(CC2CCNC2=O)CO)NC(=O)OCc3ccccc3"                                                                                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
7VI "SYSTEMATIC NAME" ACDLabs              12.01 "N-[(benzyloxy)carbonyl]-L-valyl-3-cyclopropyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-alaninamide"                                                                                                    
7VI "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(phenylmethyl) ~{N}-[(2~{S})-1-[[(2~{S})-3-cyclopropyl-1-oxidanylidene-1-[[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]propan-2-yl]amino]-3-methyl-1-oxidanylidene-butan-2-yl]carbamate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
7VI "Create component" 2021-08-23 RCSB 
7VI "Initial release"  2022-07-20 RCSB 
7VI "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            7VI 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C18 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
