data_MDI
# 
_chem_comp.id                                    MDI 
_chem_comp.name                                  "3-[bis(fluoranyl)methyl]-~{N}-methyl-~{N}-[(1~{R})-8-methyl-5-(3-methyl-1~{H}-indazol-6-yl)-1,2,3,4-tetrahydronaphthalen-1-yl]pyridine-2-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H26 F2 N4 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-07-27 
_chem_comp.pdbx_modified_date                    2023-09-23 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        460.518 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     MDI 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8ANS 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
MDI C1  C1  C 0 1 Y N N 16.315 -7.684  -35.054 -0.222 1.690  -0.550 C1  MDI 1  
MDI C2  C2  C 0 1 Y N N 15.598 -8.305  -36.070 0.770  2.632  -0.360 C2  MDI 2  
MDI C3  C3  C 0 1 Y N N 14.263 -8.630  -35.928 2.071  2.227  -0.144 C3  MDI 3  
MDI C7  C4  C 0 1 N N R 15.969 -6.728  -32.554 -1.061 -0.634 -0.755 C7  MDI 4  
MDI C8  C5  C 0 1 N N N 16.018 -7.658  -31.350 -0.678 -2.033 -0.278 C8  MDI 5  
MDI C9  C6  C 0 1 N N N 14.535 -7.998  -31.166 0.672  -2.404 -0.901 C9  MDI 6  
MDI C10 C7  C 0 1 N N N 13.685 -7.352  -32.350 1.753  -1.537 -0.260 C10 MDI 7  
MDI C11 C8  C 0 1 N N N 16.538 -4.497  -33.275 -2.152 0.070  1.425  C11 MDI 8  
MDI C12 C9  C 0 1 N N N 18.361 -5.662  -32.329 -3.408 0.015  -0.663 C12 MDI 9  
MDI C13 C10 C 0 1 Y N N 19.113 -4.385  -32.622 -4.570 0.583  0.060  C13 MDI 10 
MDI C14 C11 C 0 1 Y N N 19.522 -3.558  -31.568 -5.598 -0.256 0.483  C14 MDI 11 
MDI C15 C12 C 0 1 Y N N 20.204 -2.390  -31.896 -6.678 0.290  1.159  C15 MDI 12 
MDI C16 C13 C 0 1 Y N N 20.449 -2.085  -33.224 -6.693 1.656  1.387  C16 MDI 13 
MDI C19 C14 C 0 1 Y N N 12.144 -8.719  -34.710 3.770  0.428  0.115  C19 MDI 14 
MDI C20 C15 C 0 1 Y N N 11.197 -7.724  -34.436 4.042  -0.542 1.088  C20 MDI 15 
MDI C21 C16 C 0 1 Y N N 9.840  -7.987  -34.448 5.319  -0.957 1.313  C21 MDI 16 
MDI C22 C17 C 0 1 Y N N 9.389  -9.262  -34.763 6.375  -0.414 0.569  C22 MDI 17 
MDI C24 C18 C 0 1 Y N N 10.337 -10.257 -35.058 6.109  0.562  -0.412 C24 MDI 18 
MDI F1  F1  F 0 1 N N N 17.873 -3.935  -29.943 -6.821 -2.282 0.300  F1  MDI 19 
MDI C18 C19 C 0 1 N N N 19.220 -3.960  -30.143 -5.536 -1.737 0.211  C18 MDI 20 
MDI F   F2  F 0 1 N N N 19.812 -3.102  -29.268 -5.025 -1.954 -1.074 F   MDI 21 
MDI C17 C20 C 0 1 Y N N 20.003 -2.956  -34.189 -5.636 2.432  0.937  C17 MDI 22 
MDI N1  N1  N 0 1 Y N N 19.343 -4.092  -33.914 -4.621 1.887  0.303  N1  MDI 23 
MDI O   O1  O 0 1 N N N 18.956 -6.591  -31.805 -3.507 -0.277 -1.838 O   MDI 24 
MDI N   N2  N 0 1 N N N 17.046 -5.721  -32.661 -2.241 -0.177 -0.016 N   MDI 25 
MDI C6  C21 C 0 1 Y N N 15.622 -7.406  -33.863 0.072  0.332  -0.527 C6  MDI 26 
MDI C   C22 C 0 1 N N N 17.770 -7.355  -35.270 -1.642 2.141  -0.780 C   MDI 27 
MDI C5  C23 C 0 1 Y N N 14.273 -7.713  -33.697 1.365  -0.083 -0.308 C5  MDI 28 
MDI C4  C24 C 0 1 Y N N 13.587 -8.363  -34.738 2.373  0.869  -0.117 C4  MDI 29 
MDI C25 C25 C 0 1 Y N N 11.700 -9.998  -35.047 4.802  0.982  -0.629 C25 MDI 30 
MDI N3  N3  N 0 1 Y N N 9.633  -11.385 -35.327 7.319  0.903  -0.964 N3  MDI 31 
MDI N2  N4  N 0 1 Y N N 8.281  -11.178 -35.217 8.312  0.139  -0.339 N2  MDI 32 
MDI C23 C26 C 0 1 Y N N 8.124  -9.909  -34.879 7.774  -0.629 0.564  C23 MDI 33 
MDI C26 C27 C 0 1 N N N 6.757  -9.320  -34.663 8.517  -1.597 1.449  C26 MDI 34 
MDI H1  H1  H 0 1 N N N 16.099 -8.540  -36.997 0.527  3.684  -0.380 H1  MDI 35 
MDI H2  H2  H 0 1 N N N 13.737 -9.096  -36.748 2.851  2.959  0.004  H2  MDI 36 
MDI H3  H3  H 0 1 N N N 15.076 -6.118  -32.352 -1.295 -0.669 -1.819 H3  MDI 37 
MDI H4  H4  H 0 1 N N N 16.613 -8.558  -31.562 -0.595 -2.040 0.809  H4  MDI 38 
MDI H5  H5  H 0 1 N N N 16.426 -7.148  -30.465 -1.438 -2.749 -0.593 H5  MDI 39 
MDI H6  H6  H 0 1 N N N 14.185 -7.597  -30.203 0.887  -3.456 -0.714 H6  MDI 40 
MDI H7  H7  H 0 1 N N N 14.406 -9.090  -31.177 0.643  -2.221 -1.975 H7  MDI 41 
MDI H8  H8  H 0 1 N N N 13.686 -6.258  -32.238 1.887  -1.839 0.779  H8  MDI 42 
MDI H9  H9  H 0 1 N N N 12.652 -7.725  -32.297 2.691  -1.676 -0.798 H9  MDI 43 
MDI H10 H10 H 0 1 N N N 17.350 -3.758  -33.348 -1.957 1.128  1.601  H10 MDI 44 
MDI H11 H11 H 0 1 N N N 16.157 -4.723  -34.282 -3.093 -0.209 1.900  H11 MDI 45 
MDI H12 H12 H 0 1 N N N 15.724 -4.088  -32.658 -1.342 -0.524 1.847  H12 MDI 46 
MDI H13 H13 H 0 1 N N N 20.541 -1.723  -31.116 -7.490 -0.336 1.499  H13 MDI 47 
MDI H14 H14 H 0 1 N N N 20.978 -1.184  -33.495 -7.520 2.113  1.910  H14 MDI 48 
MDI H15 H15 H 0 1 N N N 11.536 -6.724  -34.209 3.232  -0.964 1.664  H15 MDI 49 
MDI H16 H16 H 0 1 N N N 9.134  -7.204  -34.213 5.518  -1.706 2.066  H16 MDI 50 
MDI H17 H17 H 0 1 N N N 19.604 -4.979  -29.989 -4.887 -2.215 0.945  H17 MDI 51 
MDI H18 H18 H 0 1 N N N 20.194 -2.713  -35.224 -5.642 3.497  1.117  H18 MDI 52 
MDI H19 H19 H 0 1 N N N 17.859 -6.346  -35.698 -2.186 2.121  0.164  H19 MDI 53 
MDI H20 H20 H 0 1 N N N 18.301 -7.392  -34.307 -1.641 3.155  -1.178 H20 MDI 54 
MDI H21 H21 H 0 1 N N N 18.213 -8.087  -35.962 -2.125 1.471  -1.491 H21 MDI 55 
MDI H22 H22 H 0 1 N N N 12.407 -10.775 -35.296 4.590  1.730  -1.379 H22 MDI 56 
MDI H23 H23 H 0 1 N N N 10.048 -12.260 -35.575 7.459  1.551  -1.671 H23 MDI 57 
MDI H24 H24 H 0 1 N N N 5.993  -10.094 -34.830 8.822  -1.091 2.365  H24 MDI 58 
MDI H25 H25 H 0 1 N N N 6.679  -8.944  -33.632 7.866  -2.435 1.696  H25 MDI 59 
MDI H26 H26 H 0 1 N N N 6.599  -8.491  -35.369 9.400  -1.964 0.926  H26 MDI 60 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
MDI C2  C3  DOUB Y N 1  
MDI C2  C1  SING Y N 2  
MDI C3  C4  SING Y N 3  
MDI N3  N2  SING Y N 4  
MDI N3  C24 SING Y N 5  
MDI C   C1  SING N N 6  
MDI N2  C23 DOUB Y N 7  
MDI C24 C25 DOUB Y N 8  
MDI C24 C22 SING Y N 9  
MDI C1  C6  DOUB Y N 10 
MDI C25 C19 SING Y N 11 
MDI C23 C22 SING Y N 12 
MDI C23 C26 SING N N 13 
MDI C22 C21 DOUB Y N 14 
MDI C4  C19 SING N N 15 
MDI C4  C5  DOUB Y N 16 
MDI C19 C20 DOUB Y N 17 
MDI C21 C20 SING Y N 18 
MDI C17 N1  DOUB Y N 19 
MDI C17 C16 SING Y N 20 
MDI N1  C13 SING Y N 21 
MDI C6  C5  SING Y N 22 
MDI C6  C7  SING N N 23 
MDI C5  C10 SING N N 24 
MDI C11 N   SING N N 25 
MDI C16 C15 DOUB Y N 26 
MDI N   C7  SING N N 27 
MDI N   C12 SING N N 28 
MDI C13 C12 SING N N 29 
MDI C13 C14 DOUB Y N 30 
MDI C7  C8  SING N N 31 
MDI C10 C9  SING N N 32 
MDI C12 O   DOUB N N 33 
MDI C15 C14 SING Y N 34 
MDI C14 C18 SING N N 35 
MDI C8  C9  SING N N 36 
MDI C18 F1  SING N N 37 
MDI C18 F   SING N N 38 
MDI C2  H1  SING N N 39 
MDI C3  H2  SING N N 40 
MDI C7  H3  SING N N 41 
MDI C8  H4  SING N N 42 
MDI C8  H5  SING N N 43 
MDI C9  H6  SING N N 44 
MDI C9  H7  SING N N 45 
MDI C10 H8  SING N N 46 
MDI C10 H9  SING N N 47 
MDI C11 H10 SING N N 48 
MDI C11 H11 SING N N 49 
MDI C11 H12 SING N N 50 
MDI C15 H13 SING N N 51 
MDI C16 H14 SING N N 52 
MDI C20 H15 SING N N 53 
MDI C21 H16 SING N N 54 
MDI C18 H17 SING N N 55 
MDI C17 H18 SING N N 56 
MDI C   H19 SING N N 57 
MDI C   H20 SING N N 58 
MDI C   H21 SING N N 59 
MDI C25 H22 SING N N 60 
MDI N3  H23 SING N N 61 
MDI C26 H24 SING N N 62 
MDI C26 H25 SING N N 63 
MDI C26 H26 SING N N 64 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
MDI InChI            InChI                1.06  "InChI=1S/C27H26F2N4O/c1-15-9-11-19(17-10-12-18-16(2)31-32-22(18)14-17)20-6-4-8-23(24(15)20)33(3)27(34)25-21(26(28)29)7-5-13-30-25/h5,7,9-14,23,26H,4,6,8H2,1-3H3,(H,31,32)/t23-/m1/s1" 
MDI InChIKey         InChI                1.06  ZGVMLURVURNUQI-HSZRJFAPSA-N                                                                                                                                                             
MDI SMILES_CANONICAL CACTVS               3.385 "CN([C@@H]1CCCc2c(ccc(C)c12)c3ccc4c(C)n[nH]c4c3)C(=O)c5ncccc5C(F)F"                                                                                                                     
MDI SMILES           CACTVS               3.385 "CN([CH]1CCCc2c(ccc(C)c12)c3ccc4c(C)n[nH]c4c3)C(=O)c5ncccc5C(F)F"                                                                                                                       
MDI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc(c2c1[C@@H](CCC2)N(C)C(=O)c3c(cccn3)C(F)F)c4ccc5c(n[nH]c5c4)C"                                                                                                                   
MDI SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1ccc(c2c1C(CCC2)N(C)C(=O)c3c(cccn3)C(F)F)c4ccc5c(n[nH]c5c4)C"                                                                                                                        
# 
_pdbx_chem_comp_identifier.comp_id           MDI 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "3-[bis(fluoranyl)methyl]-~{N}-methyl-~{N}-[(1~{R})-8-methyl-5-(3-methyl-1~{H}-indazol-6-yl)-1,2,3,4-tetrahydronaphthalen-1-yl]pyridine-2-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
MDI "Create component"  2022-07-27 PDBE 
MDI "Initial release"   2022-08-31 RCSB 
MDI "Modify descriptor" 2023-09-23 RCSB 
# 
