data_YGI
# 
_chem_comp.id                                    YGI 
_chem_comp.name                                  "{[(4S)-8,9-dimethylthieno[3,2-e][1,2,4]triazolo[4,3-c]pyrimidin-3-yl]sulfanyl}acetic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C11 H10 N4 O2 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-14 
_chem_comp.pdbx_modified_date                    2023-07-07 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        294.353 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YGI 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8T5K 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YGI C1  C1  C 0 1 N N N 39.149 -4.558  14.308 -5.534 0.159  -0.001 C1  YGI 1  
YGI N1  N1  N 0 1 Y N N 38.907 -6.009  17.478 -0.162 -0.489 -0.002 N1  YGI 2  
YGI O1  O1  O 0 1 N N N 39.323 -5.807  14.406 -6.574 1.008  0.001  O1  YGI 3  
YGI C2  C2  C 0 1 N N N 37.761 -4.007  14.678 -4.125 0.694  0.000  C2  YGI 4  
YGI N2  N2  N 0 1 Y N N 40.526 -4.852  18.366 0.086  1.664  0.001  N2  YGI 5  
YGI O2  O2  O 0 1 N N N 40.103 -3.828  13.930 -5.727 -1.034 0.003  O2  YGI 6  
YGI C3  C3  C 0 1 Y N N 38.722 -4.702  17.218 -1.386 0.117  -0.001 C3  YGI 7  
YGI N3  N3  N 0 1 Y N N 39.707 -4.003  17.734 -1.178 1.414  0.001  N3  YGI 8  
YGI C4  C4  C 0 1 Y N N 40.026 -6.084  18.193 0.757  0.539  -0.001 C4  YGI 9  
YGI N4  N4  N 0 1 Y N N 38.615 -8.286  17.543 1.528  -2.087 0.004  N4  YGI 10 
YGI C5  C5  C 0 1 Y N N 38.205 -7.095  17.151 0.268  -1.782 0.001  C5  YGI 11 
YGI C6  C6  C 0 1 Y N N 39.709 -8.445  18.263 2.512  -1.161 -0.003 C6  YGI 12 
YGI C7  C7  C 0 1 Y N N 40.477 -7.340  18.621 2.192  0.192  -0.001 C7  YGI 13 
YGI C8  C8  C 0 1 Y N N 41.797 -9.038  19.644 4.491  0.396  -0.001 C8  YGI 14 
YGI C9  C9  C 0 1 Y N N 41.646 -7.658  19.392 3.324  1.020  -0.000 C9  YGI 15 
YGI C10 C10 C 0 1 N N N 42.900 -9.746  20.431 5.832  1.085  0.001  C10 YGI 16 
YGI C11 C11 C 0 1 N N N 42.610 -6.579  19.888 3.218  2.523  0.001  C11 YGI 17 
YGI S1  S1  S 0 1 N N N 37.374 -4.080  16.226 -2.953 -0.690 -0.002 S1  YGI 18 
YGI S2  S2  S 0 1 Y N N 40.493 -9.791  18.890 4.263  -1.344 0.000  S2  YGI 19 
YGI H1  H1  H 0 1 N N N 40.215 -6.023  14.161 -7.459 0.617  0.001  H1  YGI 20 
YGI H2  H2  H 0 1 N N N 37.724 -2.952  14.370 -3.968 1.305  -0.889 H2  YGI 21 
YGI H3  H3  H 0 1 N N N 37.009 -4.580  14.115 -3.968 1.302  0.891  H3  YGI 22 
YGI H4  H4  H 0 1 N N N 37.302 -6.999  16.566 -0.463 -2.577 -0.000 H4  YGI 23 
YGI H5  H5  H 0 1 N N N 42.713 -10.830 20.431 6.154  1.250  1.029  H5  YGI 24 
YGI H6  H6  H 0 1 N N N 43.874 -9.542  19.962 6.562  0.461  -0.514 H6  YGI 25 
YGI H7  H7  H 0 1 N N N 42.907 -9.375  21.467 5.748  2.044  -0.511 H7  YGI 26 
YGI H8  H8  H 0 1 N N N 42.288 -6.226  20.879 3.192  2.884  1.029  H8  YGI 27 
YGI H9  H9  H 0 1 N N N 43.624 -6.999  19.961 4.080  2.948  -0.512 H9  YGI 28 
YGI H10 H10 H 0 1 N N N 42.612 -5.736  19.181 2.305  2.823  -0.513 H10 YGI 29 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YGI O2  C1  DOUB N N 1  
YGI C1  O1  SING N N 2  
YGI C1  C2  SING N N 3  
YGI C2  S1  SING N N 4  
YGI S1  C3  SING N N 5  
YGI C5  N1  SING Y N 6  
YGI C5  N4  DOUB Y N 7  
YGI C3  N1  SING Y N 8  
YGI C3  N3  DOUB Y N 9  
YGI N1  C4  SING Y N 10 
YGI N4  C6  SING Y N 11 
YGI N3  N2  SING Y N 12 
YGI C4  N2  DOUB Y N 13 
YGI C4  C7  SING Y N 14 
YGI C6  C7  DOUB Y N 15 
YGI C6  S2  SING Y N 16 
YGI C7  C9  SING Y N 17 
YGI S2  C8  SING Y N 18 
YGI C9  C8  DOUB Y N 19 
YGI C9  C11 SING N N 20 
YGI C8  C10 SING N N 21 
YGI O1  H1  SING N N 22 
YGI C2  H2  SING N N 23 
YGI C2  H3  SING N N 24 
YGI C5  H4  SING N N 25 
YGI C10 H5  SING N N 26 
YGI C10 H6  SING N N 27 
YGI C10 H7  SING N N 28 
YGI C11 H8  SING N N 29 
YGI C11 H9  SING N N 30 
YGI C11 H10 SING N N 31 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YGI SMILES           ACDLabs              12.01 "O=C(O)CSc1nnc2n1cnc1sc(C)c(C)c21"                                                                      
YGI InChI            InChI                1.06  "InChI=1S/C11H10N4O2S2/c1-5-6(2)19-10-8(5)9-13-14-11(15(9)4-12-10)18-3-7(16)17/h4H,3H2,1-2H3,(H,16,17)" 
YGI InChIKey         InChI                1.06  LKRSMSJNYWHAHQ-UHFFFAOYSA-N                                                                             
YGI SMILES_CANONICAL CACTVS               3.385 "Cc1sc2ncn3c(SCC(O)=O)nnc3c2c1C"                                                                        
YGI SMILES           CACTVS               3.385 "Cc1sc2ncn3c(SCC(O)=O)nnc3c2c1C"                                                                        
YGI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(sc2c1c3nnc(n3cn2)SCC(=O)O)C"                                                                      
YGI SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1c(sc2c1c3nnc(n3cn2)SCC(=O)O)C"                                                                      
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YGI "SYSTEMATIC NAME" ACDLabs              12.01 "{[(4S)-8,9-dimethylthieno[3,2-e][1,2,4]triazolo[4,3-c]pyrimidin-3-yl]sulfanyl}acetic acid"                                 
YGI "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[(11,12-dimethyl-10-thia-3,4,6,8-tetrazatricyclo[7.3.0.0^{2,6}]dodeca-1(9),2,4,7,11-pentaen-5-yl)sulfanyl]ethanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YGI "Create component" 2023-06-14 RCSB 
YGI "Initial release"  2023-07-12 RCSB 
# 
