data_2SJ
#

_chem_comp.id                                   2SJ
_chem_comp.name                                 "N-[(7S)-10-hydroxy-1,2,3-trimethoxy-9-oxo-5,6,7,9-tetrahydrobenzo[a]heptalen-7-yl]acetamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C21 H23 N O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        Colchiceine
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2014-01-21
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       385.410
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    2SJ
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4LYS
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
2SJ  O4   O4   O  0  1  N  N  N   6.919  54.014  4.407   1.730  -2.003  -2.307  O4   2SJ   1  
2SJ  C12  C12  C  0  1  N  N  N   6.319  52.951  4.546   2.380  -2.654  -1.516  C12  2SJ   2  
2SJ  C13  C13  C  0  1  N  N  N   6.132  52.080  3.364   3.510  -3.522  -2.006  C13  2SJ   3  
2SJ  N1   N1   N  0  1  N  N  N   5.811  52.571  5.726   2.095  -2.596  -0.200  N1   2SJ   4  
2SJ  C11  C11  C  0  1  N  N  S   5.165  51.290  5.948   1.000  -1.747   0.275  C11  2SJ   5  
2SJ  C14  C14  C  0  1  N  N  N   3.839  51.153  5.244   1.503  -0.324   0.414  C14  2SJ   6  
2SJ  C15  C15  C  0  1  N  N  N   3.213  52.296  4.917   2.835  -0.169   0.508  C15  2SJ   7  
2SJ  C10  C10  C  0  1  N  N  N   4.980  51.026  7.444   0.488  -2.293   1.593  C10  2SJ   8  
2SJ  C9   C9   C  0  1  N  N  N   4.360  49.662  7.759  -0.391  -1.271   2.307  C9   2SJ   9  
2SJ  C8   C8   C  0  1  Y  N  N   4.707  48.580  6.751  -1.339  -0.640   1.321  C8   2SJ  10  
2SJ  C7   C7   C  0  1  Y  N  N   5.491  47.497  7.133  -2.667  -1.013   1.300  C7   2SJ  11  
2SJ  C5   C5   C  0  1  Y  N  N   5.816  46.494  6.229  -3.542  -0.419   0.399  C5   2SJ  12  
2SJ  C3   C3   C  0  1  Y  N  N   5.367  46.571  4.935  -3.087   0.554  -0.485  C3   2SJ  13  
2SJ  C1   C1   C  0  1  Y  N  N   4.573  47.627  4.551  -1.751   0.932  -0.471  C1   2SJ  14  
2SJ  O1   O1   O  0  1  N  N  N   4.145  47.679  3.255  -1.299   1.884  -1.330  O1   2SJ  15  
2SJ  C2   C2   C  0  1  N  N  N   4.709  48.671  2.397  -0.925   1.450  -2.639  C2   2SJ  16  
2SJ  O2   O2   O  0  1  N  N  N   5.631  45.558  4.059  -3.951   1.134  -1.362  O2   2SJ  17  
2SJ  C4   C4   C  0  1  N  N  N   6.681  45.661  3.156  -4.631   2.311  -0.920  C4   2SJ  18  
2SJ  O3   O3   O  0  1  N  N  N   6.578  45.405  6.556  -4.849  -0.792   0.380  O3   2SJ  19  
2SJ  C6   C6   C  0  1  N  N  N   7.121  45.229  7.855  -5.250  -1.797   1.313  C6   2SJ  20  
2SJ  C22  C22  C  0  1  Y  N  N   4.244  48.643  5.452  -0.875   0.326   0.435  C22  2SJ  21  
2SJ  C21  C21  C  0  1  N  N  N   3.382  49.787  4.989   0.568   0.711   0.438  C21  2SJ  22  
2SJ  C20  C20  C  0  1  N  N  N   2.239  49.384  4.387   0.848   2.053   0.469  C20  2SJ  23  
2SJ  C19  C19  C  0  1  N  N  N   1.165  50.140  3.788   2.001   2.745   0.525  C19  2SJ  24  
2SJ  C17  C17  C  0  1  N  N  N   1.044  51.465  3.711   3.275   2.273   0.597  C17  2SJ  25  
2SJ  C16  C16  C  0  1  N  N  N   1.946  52.487  4.218   3.638   0.931   0.618  C16  2SJ  26  
2SJ  O5   O5   O  0  1  N  N  N   1.623  53.654  4.017   4.833   0.706   0.753  O5   2SJ  27  
2SJ  O6   O6   O  0  1  N  N  N  -0.021  51.923  3.084   4.274   3.188   0.653  O6   2SJ  28  
2SJ  H1   H1   H  0  1  N  N  N   6.591  52.553  2.483   4.435  -2.946  -2.012  H1   2SJ  29  
2SJ  H2   H2   H  0  1  N  N  N   6.609  51.106  3.548   3.622  -4.380  -1.343  H2   2SJ  30  
2SJ  H3   H3   H  0  1  N  N  N   5.057  51.934  3.183   3.291  -3.869  -3.015  H3   2SJ  31  
2SJ  H4   H4   H  0  1  N  N  N   5.881  53.205  6.496   2.615  -3.117   0.431  H4   2SJ  32  
2SJ  H5   H5   H  0  1  N  N  N   5.827  50.502  5.559   0.192  -1.767  -0.455  H5   2SJ  33  
2SJ  H6   H6   H  0  1  N  N  N   3.719  53.203  5.214   3.380  -1.102   0.494  H6   2SJ  34  
2SJ  H7   H7   H  0  1  N  N  N   5.965  51.080  7.930  -0.093  -3.195   1.405  H7   2SJ  35  
2SJ  H8   H8   H  0  1  N  N  N   4.325  51.808  7.856   1.337  -2.543   2.231  H8   2SJ  36  
2SJ  H9   H9   H  0  1  N  N  N   3.266  49.776  7.782  -0.961  -1.768   3.092  H9   2SJ  37  
2SJ  H10  H10  H  0  1  N  N  N   4.716  49.340  8.749   0.238  -0.498   2.750  H10  2SJ  38  
2SJ  H11  H11  H  0  1  N  N  N   5.853  47.435  8.149  -3.027  -1.766   1.985  H11  2SJ  39  
2SJ  H12  H12  H  0  1  N  N  N   4.265  48.584  1.394  -0.182   0.657  -2.561  H12  2SJ  40  
2SJ  H13  H13  H  0  1  N  N  N   4.499  49.671  2.805  -1.804   1.075  -3.163  H13  2SJ  41  
2SJ  H14  H14  H  0  1  N  N  N   5.797  48.523  2.331  -0.503   2.289  -3.193  H14  2SJ  42  
2SJ  H15  H15  H  0  1  N  N  N   6.729  44.749  2.543  -3.901   3.052  -0.595  H15  2SJ  43  
2SJ  H16  H16  H  0  1  N  N  N   6.520  46.533  2.505  -5.222   2.718  -1.741  H16  2SJ  44  
2SJ  H17  H17  H  0  1  N  N  N   7.626  45.783  3.705  -5.289   2.059  -0.089  H17  2SJ  45  
2SJ  H18  H18  H  0  1  N  N  N   7.694  44.291  7.889  -4.683  -2.710   1.131  H18  2SJ  46  
2SJ  H19  H19  H  0  1  N  N  N   7.785  46.073  8.092  -5.060  -1.448   2.328  H19  2SJ  47  
2SJ  H20  H20  H  0  1  N  N  N   6.305  45.187  8.591  -6.314  -2.001   1.192  H20  2SJ  48  
2SJ  H21  H21  H  0  1  N  N  N   2.108  48.313  4.348  -0.032   2.680   0.442  H21  2SJ  49  
2SJ  H22  H22  H  0  1  N  N  N   0.364  49.563  3.350   1.902   3.821   0.511  H22  2SJ  50  
2SJ  H23  H23  H  0  1  N  N  N  -0.003  52.873  3.081   3.969   4.105   0.635  H23  2SJ  51  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
2SJ  C2   O1   SING  N  N   1  
2SJ  O6   C17  SING  N  N   2  
2SJ  C4   O2   SING  N  N   3  
2SJ  O1   C1   SING  N  N   4  
2SJ  C13  C12  SING  N  N   5  
2SJ  C17  C19  DOUB  N  N   6  
2SJ  C17  C16  SING  N  N   7  
2SJ  C19  C20  SING  N  N   8  
2SJ  O5   C16  DOUB  N  N   9  
2SJ  O2   C3   SING  N  N  10  
2SJ  C16  C15  SING  N  N  11  
2SJ  C20  C21  DOUB  N  N  12  
2SJ  O4   C12  DOUB  N  N  13  
2SJ  C12  N1   SING  N  N  14  
2SJ  C1   C3   DOUB  Y  N  15  
2SJ  C1   C22  SING  Y  N  16  
2SJ  C15  C14  DOUB  N  N  17  
2SJ  C3   C5   SING  Y  N  18  
2SJ  C21  C14  SING  N  N  19  
2SJ  C21  C22  SING  N  N  20  
2SJ  C14  C11  SING  N  N  21  
2SJ  C22  C8   DOUB  Y  N  22  
2SJ  N1   C11  SING  N  N  23  
2SJ  C11  C10  SING  N  N  24  
2SJ  C5   O3   SING  N  N  25  
2SJ  C5   C7   DOUB  Y  N  26  
2SJ  O3   C6   SING  N  N  27  
2SJ  C8   C7   SING  Y  N  28  
2SJ  C8   C9   SING  N  N  29  
2SJ  C10  C9   SING  N  N  30  
2SJ  C13  H1   SING  N  N  31  
2SJ  C13  H2   SING  N  N  32  
2SJ  C13  H3   SING  N  N  33  
2SJ  N1   H4   SING  N  N  34  
2SJ  C11  H5   SING  N  N  35  
2SJ  C15  H6   SING  N  N  36  
2SJ  C10  H7   SING  N  N  37  
2SJ  C10  H8   SING  N  N  38  
2SJ  C9   H9   SING  N  N  39  
2SJ  C9   H10  SING  N  N  40  
2SJ  C7   H11  SING  N  N  41  
2SJ  C2   H12  SING  N  N  42  
2SJ  C2   H13  SING  N  N  43  
2SJ  C2   H14  SING  N  N  44  
2SJ  C4   H15  SING  N  N  45  
2SJ  C4   H16  SING  N  N  46  
2SJ  C4   H17  SING  N  N  47  
2SJ  C6   H18  SING  N  N  48  
2SJ  C6   H19  SING  N  N  49  
2SJ  C6   H20  SING  N  N  50  
2SJ  C20  H21  SING  N  N  51  
2SJ  C19  H22  SING  N  N  52  
2SJ  O6   H23  SING  N  N  53  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
2SJ  SMILES            ACDLabs               12.01  "O=C3C=C2C(c1c(cc(OC)c(OC)c1OC)CCC2NC(=O)C)=CC=C3O"  
2SJ  InChI             InChI                 1.03   "InChI=1S/C21H23NO6/c1-11(23)22-15-7-5-12-9-18(26-2)20(27-3)21(28-4)19(12)13-6-8-16(24)17(25)10-14(13)15/h6,8-10,15H,5,7H2,1-4H3,(H,22,23)(H,24,25)/t15-/m0/s1"  
2SJ  InChIKey          InChI                 1.03   PRGILOMAMBLWNG-HNNXBMFYSA-N  
2SJ  SMILES_CANONICAL  CACTVS                3.385  "COc1cc2CC[C@H](NC(C)=O)C3=CC(=O)C(=CC=C3c2c(OC)c1OC)O"  
2SJ  SMILES            CACTVS                3.385  "COc1cc2CC[CH](NC(C)=O)C3=CC(=O)C(=CC=C3c2c(OC)c1OC)O"  
2SJ  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "CC(=O)N[C@H]1CCc2cc(c(c(c2C3=CC=C(C(=O)C=C13)O)OC)OC)OC"  
2SJ  SMILES            "OpenEye OEToolkits"  1.7.6  "CC(=O)NC1CCc2cc(c(c(c2C3=CC=C(C(=O)C=C13)O)OC)OC)OC"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
2SJ  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-[(7S)-10-hydroxy-1,2,3-trimethoxy-9-oxo-5,6,7,9-tetrahydrobenzo[a]heptalen-7-yl]acetamide"  
2SJ  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "N-[(7S)-1,2,3-trimethoxy-10-oxidanyl-9-oxidanylidene-6,7-dihydro-5H-benzo[a]heptalen-7-yl]ethanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
2SJ  "Create component"  2014-01-21  RCSB  
2SJ  "Initial release"   2014-01-29  RCSB  
2SJ  "Modify synonyms"   2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     2SJ
_pdbx_chem_comp_synonyms.name        Colchiceine
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
