data_76J
# 
_chem_comp.id                                    76J 
_chem_comp.name                                  "[(2~{S},5~{S})-1-[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]-5-azaniumyl-6-oxidanyl-6-oxidanylidene-hexan-2-yl]-pentyl-azanium" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H35 N7 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    2 
_chem_comp.pdbx_initial_date                     2016-09-06 
_chem_comp.pdbx_modified_date                    2016-09-30 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        453.536 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     76J 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5LT6 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
76J C1  C1  C 0 1 N N N 21.853 12.064 63.465 -6.503 5.287  2.486  C1  76J 1  
76J C2  C2  C 0 1 N N N 21.581 13.529 63.746 -5.636 4.924  1.279  C2  76J 2  
76J C3  C3  C 0 1 N N N 20.100 13.886 63.882 -5.102 3.500  1.444  C3  76J 3  
76J C5  C4  C 0 1 N N N 17.836 13.195 64.805 -3.702 1.713  0.401  C5  76J 4  
76J C7  C5  C 0 1 N N S 16.492 14.222 66.739 -2.255 0.048  -0.542 C7  76J 5  
76J C8  C6  C 0 1 N N N 16.873 14.871 68.073 -3.346 -1.025 -0.513 C8  76J 6  
76J C10 C7  C 0 1 N N S 15.349 14.355 69.989 -3.829 -3.422 -0.001 C10 76J 7  
76J C12 C8  C 0 1 N N N 15.027 13.353 71.114 -3.209 -4.776 0.233  C12 76J 8  
76J C15 C9  C 0 1 N N N 15.612 15.099 65.820 -1.277 -0.251 -1.680 C15 76J 9  
76J C16 C10 C 0 1 N N R 14.275 15.599 66.410 -0.119 0.748  -1.633 C16 76J 10 
76J O17 O1  O 0 1 N N N 14.462 16.436 67.572 0.659  0.539  -0.442 O17 76J 11 
76J C19 C11 C 0 1 N N R 12.564 17.281 66.431 2.193  0.223  -2.197 C19 76J 12 
76J C21 C12 C 0 1 N N S 13.446 16.483 65.459 0.816  0.524  -2.837 C21 76J 13 
76J C24 C13 C 0 1 Y N N 15.620 18.908 67.150 2.672  -0.915 0.927  C24 76J 14 
76J C26 C14 C 0 1 Y N N 14.857 20.902 67.289 4.704  -0.336 1.413  C26 76J 15 
76J C27 C15 C 0 1 Y N N 14.606 22.286 67.306 6.016  -0.171 1.890  C27 76J 16 
76J C4  C16 C 0 1 N N N 19.242 12.773 64.431 -4.236 3.137  0.236  C4  76J 17 
76J N6  N1  N 1 1 N N N 17.831 13.898 66.113 -2.869 1.365  -0.758 N6  76J 18 
76J C9  C17 C 0 1 N N N 16.634 14.008 69.277 -2.723 -2.375 -0.152 C9  76J 19 
76J N11 N2  N 1 1 N N N 15.458 15.740 70.531 -4.684 -3.071 1.141  N11 76J 20 
76J O13 O2  O 0 1 N N N 15.349 12.179 70.907 -3.146 -5.226 1.353  O13 76J 21 
76J O14 O3  O 0 1 N N N 14.463 13.763 72.152 -2.728 -5.482 -0.802 O14 76J 22 
76J C18 C18 C 0 1 N N R 13.541 17.534 67.606 2.032  0.830  -0.780 C18 76J 23 
76J O20 O4  O 0 1 N N N 11.450 16.525 66.863 3.243  0.876  -2.915 O20 76J 24 
76J O22 O5  O 0 1 N N N 12.711 15.689 64.560 0.885  1.702  -3.642 O22 76J 25 
76J N23 N3  N 0 1 Y N N 14.288 18.797 67.463 2.945  0.183  0.166  N23 76J 26 
76J N25 N4  N 0 1 Y N N 15.998 20.160 67.042 3.705  -1.218 1.657  N25 76J 27 
76J N28 N5  N 0 1 N N N 15.557 23.183 67.056 6.537  -1.032 2.839  N28 76J 28 
76J N29 N6  N 0 1 Y N N 13.338 22.728 67.551 6.743  0.831  1.408  N29 76J 29 
76J C30 C19 C 0 1 Y N N 12.382 21.793 67.772 6.254  1.658  0.502  C30 76J 30 
76J N31 N7  N 0 1 Y N N 12.519 20.469 67.758 5.029  1.546  0.031  N31 76J 31 
76J C32 C20 C 0 1 Y N N 13.791 20.077 67.511 4.230  0.570  0.449  C32 76J 32 
76J H44 H1  H 0 1 N N N 22.938 11.901 63.383 -6.884 6.301  2.369  H44 76J 33 
76J H46 H2  H 0 1 N N N 21.451 11.452 64.286 -7.339 4.591  2.556  H46 76J 34 
76J H45 H3  H 0 1 N N N 21.367 11.775 62.521 -5.904 5.226  3.395  H45 76J 35 
76J H48 H4  H 0 1 N N N 22.087 13.798 64.685 -6.235 4.985  0.370  H48 76J 36 
76J H47 H5  H 0 1 N N N 22.002 14.121 62.920 -4.800 5.620  1.210  H47 76J 37 
76J H50 H6  H 0 1 N N N 20.014 14.751 64.556 -4.503 3.439  2.352  H50 76J 38 
76J H49 H7  H 0 1 N N N 19.718 14.157 62.887 -5.939 2.804  1.513  H49 76J 39 
76J H53 H8  H 0 1 N N N 17.443 13.870 64.030 -3.103 1.652  1.310  H53 76J 40 
76J H54 H9  H 0 1 N N N 17.197 12.302 64.872 -4.538 1.017  0.470  H54 76J 41 
76J H35 H10 H 0 1 N N N 15.957 13.283 66.944 -1.720 0.048  0.407  H35 76J 42 
76J H55 H11 H 0 1 N N N 17.943 15.124 68.039 -4.096 -0.760 0.232  H55 76J 43 
76J H56 H12 H 0 1 N N N 16.282 15.792 68.188 -3.816 -1.092 -1.494 H56 76J 44 
76J H36 H13 H 0 1 N N N 14.527 14.325 69.259 -4.429 -3.450 -0.910 H36 76J 45 
76J H59 H14 H 0 1 N N N 15.380 14.510 64.920 -0.888 -1.263 -1.568 H59 76J 46 
76J H60 H15 H 0 1 N N N 16.203 15.983 65.537 -1.793 -0.164 -2.636 H60 76J 47 
76J H40 H16 H 0 1 N N N 13.669 14.722 66.682 -0.508 1.766  -1.647 H40 76J 48 
76J H42 H17 H 0 1 N N N 12.264 18.237 65.976 2.371  -0.851 -2.142 H42 76J 49 
76J H43 H18 H 0 1 N N N 14.117 17.172 64.925 0.478  -0.326 -3.430 H43 76J 50 
76J H63 H19 H 0 1 N N N 16.279 18.064 67.009 1.735  -1.452 0.926  H63 76J 51 
76J H51 H20 H 0 1 N N N 19.173 11.983 63.668 -4.835 3.198  -0.672 H51 76J 52 
76J H52 H21 H 0 1 N N N 19.732 12.372 65.331 -3.399 3.833  0.167  H52 76J 53 
76J H34 H22 H 0 1 N N N 18.331 13.324 66.761 -3.443 1.336  -1.588 H34 76J 54 
76J H33 H23 H 0 1 N N N 18.318 14.762 65.988 -2.146 2.058  -0.874 H33 76J 55 
76J H57 H24 H 0 1 N N N 16.586 12.957 68.955 -2.037 -2.682 -0.942 H57 76J 56 
76J H58 H25 H 0 1 N N N 17.472 14.139 69.977 -2.178 -2.284 0.788  H58 76J 57 
76J H38 H26 H 0 1 N N N 14.611 15.980 71.005 -5.412 -3.762 1.240  H38 76J 58 
76J H39 H27 H 0 1 N N N 16.224 15.788 71.172 -4.127 -3.046 1.982  H39 76J 59 
76J H37 H28 H 0 1 N N N 15.612 16.381 69.779 -5.098 -2.164 0.984  H37 76J 60 
76J H1  H29 H 0 1 N N N 14.325 13.035 72.746 -2.340 -6.345 -0.603 H1  76J 61 
76J H41 H30 H 0 1 N N N 12.975 17.536 68.549 2.202  1.907  -0.802 H41 76J 62 
76J H61 H31 H 0 1 N N N 10.926 17.045 67.461 3.382  0.531  -3.807 H61 76J 63 
76J H62 H32 H 0 1 N N N 12.206 16.249 63.982 1.461  1.617  -4.415 H62 76J 64 
76J H64 H33 H 0 1 N N N 15.166 24.103 67.089 5.997  -1.760 3.183  H64 76J 65 
76J H65 H34 H 0 1 N N N 16.279 23.103 67.743 7.444  -0.908 3.160  H65 76J 66 
76J H66 H35 H 0 1 N N N 11.391 22.167 67.985 6.879  2.460  0.138  H66 76J 67 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
76J C1  C2  SING N N 1  
76J C2  C3  SING N N 2  
76J C3  C4  SING N N 3  
76J C4  C5  SING N N 4  
76J O22 C21 SING N N 5  
76J C5  N6  SING N N 6  
76J C21 C16 SING N N 7  
76J C21 C19 SING N N 8  
76J C15 C16 SING N N 9  
76J C15 C7  SING N N 10 
76J N6  C7  SING N N 11 
76J C16 O17 SING N N 12 
76J C19 O20 SING N N 13 
76J C19 C18 SING N N 14 
76J C7  C8  SING N N 15 
76J N25 C24 DOUB Y N 16 
76J N25 C26 SING Y N 17 
76J N28 C27 SING N N 18 
76J C24 N23 SING Y N 19 
76J C26 C27 DOUB Y N 20 
76J C26 C32 SING Y N 21 
76J C27 N29 SING Y N 22 
76J N23 C32 SING Y N 23 
76J N23 C18 SING N N 24 
76J C32 N31 DOUB Y N 25 
76J N29 C30 DOUB Y N 26 
76J O17 C18 SING N N 27 
76J N31 C30 SING Y N 28 
76J C8  C9  SING N N 29 
76J C9  C10 SING N N 30 
76J C10 N11 SING N N 31 
76J C10 C12 SING N N 32 
76J O13 C12 DOUB N N 33 
76J C12 O14 SING N N 34 
76J C1  H44 SING N N 35 
76J C1  H46 SING N N 36 
76J C1  H45 SING N N 37 
76J C2  H48 SING N N 38 
76J C2  H47 SING N N 39 
76J C3  H50 SING N N 40 
76J C3  H49 SING N N 41 
76J C5  H53 SING N N 42 
76J C5  H54 SING N N 43 
76J C7  H35 SING N N 44 
76J C8  H55 SING N N 45 
76J C8  H56 SING N N 46 
76J C10 H36 SING N N 47 
76J C15 H59 SING N N 48 
76J C15 H60 SING N N 49 
76J C16 H40 SING N N 50 
76J C19 H42 SING N N 51 
76J C21 H43 SING N N 52 
76J C24 H63 SING N N 53 
76J C4  H51 SING N N 54 
76J C4  H52 SING N N 55 
76J N6  H34 SING N N 56 
76J N6  H33 SING N N 57 
76J C9  H57 SING N N 58 
76J C9  H58 SING N N 59 
76J N11 H38 SING N N 60 
76J N11 H39 SING N N 61 
76J N11 H37 SING N N 62 
76J O14 H1  SING N N 63 
76J C18 H41 SING N N 64 
76J O20 H61 SING N N 65 
76J O22 H62 SING N N 66 
76J N28 H64 SING N N 67 
76J N28 H65 SING N N 68 
76J C30 H66 SING N N 69 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
76J InChI            InChI                1.03  
"InChI=1S/C20H33N7O5/c1-2-3-4-7-23-11(5-6-12(21)20(30)31)8-13-15(28)16(29)19(32-13)27-10-26-14-17(22)24-9-25-18(14)27/h9-13,15-16,19,23,28-29H,2-8,21H2,1H3,(H,30,31)(H2,22,24,25)/p+2/t11-,12-,13+,15+,16+,19+/m0/s1" 
76J InChIKey         InChI                1.03  RFJREUSTWBSNNC-OAVPVUAOSA-P 
76J SMILES_CANONICAL CACTVS               3.385 "CCCCC[NH2+][C@@H](CC[C@H]([NH3+])C(O)=O)C[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23" 
76J SMILES           CACTVS               3.385 "CCCCC[NH2+][CH](CC[CH]([NH3+])C(O)=O)C[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23" 
76J SMILES_CANONICAL "OpenEye OEToolkits" 2.0.5 "CCCCC[NH2+][C@@H](CC[C@@H](C(=O)O)[NH3+])C[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)O" 
76J SMILES           "OpenEye OEToolkits" 2.0.5 "CCCCC[NH2+]C(CCC(C(=O)O)[NH3+])CC1C(C(C(O1)n2cnc3c2ncnc3N)O)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
76J "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.5 "[(2~{S},5~{S})-1-[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]-5-azaniumyl-6-oxidanyl-6-oxidanylidene-hexan-2-yl]-pentyl-azanium" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
76J "Create component" 2016-09-06 EBI  
76J "Initial release"  2016-10-05 RCSB 
# 
