data_S2J
#

_chem_comp.id                                   S2J
_chem_comp.name                                 "methyl 2-[(2~{R})-1-(ethylcarbamoyl)-3-oxidanylidene-piperazin-2-yl]ethanoate"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C10 H17 N3 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-03-03
_chem_comp.pdbx_modified_date                   2020-06-26
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       243.260
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    S2J
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5R5K
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
S2J  N1   N1   N  0  1  N  N  N  5.162  17.831  -0.288   0.704   2.363  -0.008  N1   S2J   1  
S2J  N3   N2   N  0  1  N  N  N  4.584  21.704  -2.472  -3.325   0.020  -0.264  N3   S2J   2  
S2J  C4   C1   C  0  1  N  N  N  6.070  21.373  -0.585  -1.755   1.469   0.951  C4   S2J   3  
S2J  C5   C2   C  0  1  N  N  N  4.885  22.128  -1.109  -2.988   1.402   0.048  C5   S2J   4  
S2J  C6   C3   C  0  1  N  N  N  5.054  20.645  -3.118  -2.472  -1.003  -0.191  C6   S2J   5  
S2J  C7   C4   C  0  1  N  N  R  5.960  19.682  -2.373  -1.064  -0.861   0.318  C7   S2J   6  
S2J  C8   C5   C  0  1  N  N  N  7.385  19.760  -2.928  -0.098  -1.554  -0.645  C8   S2J   7  
S2J  C10  C6   C  0  1  N  N  N  8.371  16.467  -2.983   3.410  -2.722   0.174  C10  S2J   8  
S2J  C1   C7   C  0  1  N  N  N  5.749  15.548   0.420   2.039   4.394  -0.276  C1   S2J   9  
S2J  C2   C8   C  0  1  N  N  N  4.944  16.780   0.709   2.039   2.866  -0.342  C2   S2J  10  
S2J  C3   C9   C  0  1  N  N  N  5.576  19.075   0.061   0.466   1.036  -0.001  C3   S2J  11  
S2J  C9   C10  C  0  1  N  N  N  8.366  18.761  -2.384   1.174  -1.902   0.083  C9   S2J  12  
S2J  N2   N3   N  0  1  N  N  N  5.892  19.964  -0.932  -0.731   0.569   0.406  N2   S2J  13  
S2J  O1   O1   O  0  1  N  N  N  5.640  19.428   1.238   1.330   0.262  -0.362  O1   S2J  14  
S2J  O2   O2   O  0  1  N  N  N  4.763  20.420  -4.299  -2.849  -2.097  -0.553  O2   S2J  15  
S2J  O3   O3   O  0  1  N  N  N  9.516  18.999  -2.139   1.256  -1.724   1.275  O3   S2J  16  
S2J  O4   O4   O  0  1  N  N  N  7.816  17.558  -2.207   2.217  -2.411  -0.593  O4   S2J  17  
S2J  H1   H1   H  0  1  N  N  N  5.001  17.626  -1.253  -0.007   2.985   0.213  H1   S2J  18  
S2J  H2   H2   H  0  1  N  N  N  3.946  22.282  -2.981  -4.235  -0.171  -0.540  H2   S2J  19  
S2J  H3   H3   H  0  1  N  N  N  6.992  21.758  -1.045  -1.374   2.490   0.978  H3   S2J  20  
S2J  H4   H4   H  0  1  N  N  N  6.131  21.484   0.508  -2.019   1.148   1.959  H4   S2J  21  
S2J  H5   H5   H  0  1  N  N  N  5.108  23.205  -1.104  -2.784   1.939  -0.878  H5   S2J  22  
S2J  H6   H6   H  0  1  N  N  N  4.015  21.931  -0.466  -3.830   1.871   0.556  H6   S2J  23  
S2J  H7   H7   H  0  1  N  N  N  5.587  18.662  -2.548  -0.986  -1.315   1.306  H7   S2J  24  
S2J  H8   H8   H  0  1  N  N  N  7.775  20.765  -2.711  -0.558  -2.465  -1.028  H8   S2J  25  
S2J  H9   H9   H  0  1  N  N  N  7.329  19.616  -4.017   0.130  -0.885  -1.475  H9   S2J  26  
S2J  H10  H10  H  0  1  N  N  N  7.833  15.537  -2.746   3.168  -3.461   0.938  H10  S2J  27  
S2J  H11  H11  H  0  1  N  N  N  8.265  16.689  -4.055   4.174  -3.125  -0.492  H11  S2J  28  
S2J  H12  H12  H  0  1  N  N  N  9.436  16.347  -2.737   3.783  -1.816   0.650  H12  S2J  29  
S2J  H13  H13  H  0  1  N  N  N  5.552  14.791   1.193   1.313   4.789  -0.988  H13  S2J  30  
S2J  H14  H14  H  0  1  N  N  N  5.466  15.148  -0.565   1.771   4.715   0.731  H14  S2J  31  
S2J  H15  H15  H  0  1  N  N  N  6.819  15.801   0.419   3.032   4.769  -0.525  H15  S2J  32  
S2J  H16  H16  H  0  1  N  N  N  5.230  17.166   1.699   2.764   2.472   0.370  H16  S2J  33  
S2J  H17  H17  H  0  1  N  N  N  3.877  16.513   0.714   2.306   2.545  -1.349  H17  S2J  34  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
S2J  O2   C6   DOUB  N  N   1  
S2J  C6   N3   SING  N  N   2  
S2J  C6   C7   SING  N  N   3  
S2J  C10  O4   SING  N  N   4  
S2J  C8   C9   SING  N  N   5  
S2J  C8   C7   SING  N  N   6  
S2J  N3   C5   SING  N  N   7  
S2J  C9   O4   SING  N  N   8  
S2J  C9   O3   DOUB  N  N   9  
S2J  C7   N2   SING  N  N  10  
S2J  C5   C4   SING  N  N  11  
S2J  N2   C4   SING  N  N  12  
S2J  N2   C3   SING  N  N  13  
S2J  N1   C3   SING  N  N  14  
S2J  N1   C2   SING  N  N  15  
S2J  C3   O1   DOUB  N  N  16  
S2J  C1   C2   SING  N  N  17  
S2J  N1   H1   SING  N  N  18  
S2J  N3   H2   SING  N  N  19  
S2J  C4   H3   SING  N  N  20  
S2J  C4   H4   SING  N  N  21  
S2J  C5   H5   SING  N  N  22  
S2J  C5   H6   SING  N  N  23  
S2J  C7   H7   SING  N  N  24  
S2J  C8   H8   SING  N  N  25  
S2J  C8   H9   SING  N  N  26  
S2J  C10  H10  SING  N  N  27  
S2J  C10  H11  SING  N  N  28  
S2J  C10  H12  SING  N  N  29  
S2J  C1   H13  SING  N  N  30  
S2J  C1   H14  SING  N  N  31  
S2J  C1   H15  SING  N  N  32  
S2J  C2   H16  SING  N  N  33  
S2J  C2   H17  SING  N  N  34  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
S2J  InChI             InChI                 1.03   "InChI=1S/C10H17N3O4/c1-3-11-10(16)13-5-4-12-9(15)7(13)6-8(14)17-2/h7H,3-6H2,1-2H3,(H,11,16)(H,12,15)/t7-/m1/s1"  
S2J  InChIKey          InChI                 1.03   RSMBLBWVWNZVOE-SSDOTTSWSA-N  
S2J  SMILES_CANONICAL  CACTVS                3.385  "CCNC(=O)N1CCNC(=O)[C@H]1CC(=O)OC"  
S2J  SMILES            CACTVS                3.385  "CCNC(=O)N1CCNC(=O)[CH]1CC(=O)OC"  
S2J  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "CCNC(=O)N1CCNC(=O)[C@H]1CC(=O)OC"  
S2J  SMILES            "OpenEye OEToolkits"  2.0.6  "CCNC(=O)N1CCNC(=O)C1CC(=O)OC"  
#
_pdbx_chem_comp_identifier.comp_id          S2J
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.6
_pdbx_chem_comp_identifier.identifier       "methyl 2-[(2~{R})-1-(ethylcarbamoyl)-3-oxidanylidene-piperazin-2-yl]ethanoate"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
S2J  "Create component"  2020-03-03  RCSB  
S2J  "Initial release"   2020-07-01  RCSB  
##
