data_WCJ
# 
_chem_comp.id                                    WCJ 
_chem_comp.name                                  "N-{4-[(5P)-4-amino-5-{3-fluoro-4-[(4-methylpyrimidin-2-yl)oxy]phenyl}-7-methyl-7H-pyrrolo[2,3-d]pyrimidin-6-yl]phenyl}-2-methylpropanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H26 F N7 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-05-11 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        511.550 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     WCJ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8STG 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
WCJ C10  C1  C 0 1 Y N N N N N -27.462 26.432 27.578 0.052  -2.179 0.036  C10  WCJ 1  
WCJ C13  C2  C 0 1 Y N N N N N -28.077 22.921 26.238 -2.132 0.638  -1.154 C13  WCJ 2  
WCJ C15  C3  C 0 1 Y N N N N N -29.455 22.701 26.488 -2.243 1.400  0.003  C15  WCJ 3  
WCJ C17  C4  C 0 1 Y N N N N N -29.519 20.267 26.479 -4.309 2.448  0.220  C17  WCJ 4  
WCJ C20  C5  C 0 1 N N N N N N -29.799 16.696 25.378 -7.219 4.707  0.188  C20  WCJ 5  
WCJ C21  C6  C 0 1 Y N N N N N -28.436 17.871 27.178 -6.942 2.256  0.658  C21  WCJ 6  
WCJ C22  C7  C 0 1 Y N N N N N -28.094 19.061 27.830 -6.123 1.143  0.766  C22  WCJ 7  
WCJ C24  C8  C 0 1 Y N N N N N -30.136 23.754 27.105 -1.608 0.995  1.168  C24  WCJ 8  
WCJ C28  C9  C 0 1 Y N N N N N -26.831 28.361 28.685 0.669  -4.396 -0.038 C28  WCJ 9  
WCJ C01  C10 C 0 1 N N N N N N -23.162 27.430 18.238 6.571  4.596  -1.400 C01  WCJ 10 
WCJ C02  C11 C 0 1 N N N N N N -22.972 26.272 19.288 6.254  3.978  -0.036 C02  WCJ 11 
WCJ C03  C12 C 0 1 N N N N N N -23.763 26.607 20.700 5.385  2.761  -0.226 C03  WCJ 12 
WCJ C05  C13 C 0 1 Y N N N N N -24.923 26.082 22.884 4.100  0.975  0.676  C05  WCJ 13 
WCJ C06  C14 C 0 1 Y N N N N N -26.171 26.765 22.965 4.191  -0.132 1.512  C06  WCJ 14 
WCJ C07  C15 C 0 1 Y N N N N N -26.724 27.117 24.223 3.324  -1.191 1.353  C07  WCJ 15 
WCJ C08  C16 C 0 1 Y N N N N N -26.061 26.818 25.432 2.352  -1.151 0.350  C08  WCJ 16 
WCJ C09  C17 C 0 1 Y N N N N N -26.590 27.166 26.765 1.421  -2.283 0.178  C09  WCJ 17 
WCJ C11  C18 C 0 1 Y N N N N N -28.120 25.152 27.217 -0.747 -0.934 0.024  C11  WCJ 18 
WCJ C12  C19 C 0 1 Y N N N N N -27.415 24.115 26.588 -1.387 -0.525 -1.147 C12  WCJ 19 
WCJ C19  C20 C 0 1 Y N N N N N -29.380 17.950 26.131 -6.368 3.470  0.318  C19  WCJ 20 
WCJ C25  C21 C 0 1 Y N N N N N -29.486 24.948 27.450 -0.863 -0.165 1.183  C25  WCJ 21 
WCJ C27  C22 C 0 1 N N N N N N -25.255 29.313 26.878 3.149  -4.115 0.248  C27  WCJ 22 
WCJ C29  C23 C 0 1 Y N N N N N -27.653 27.183 28.814 -0.452 -3.549 -0.105 C29  WCJ 23 
WCJ C30  C24 C 0 1 Y N N N N N -28.392 27.058 30.061 -1.721 -4.122 -0.278 C30  WCJ 24 
WCJ C33  C25 C 0 1 Y N N N N N -27.437 29.115 30.749 -0.730 -6.205 -0.304 C33  WCJ 25 
WCJ C35  C26 C 0 1 Y N N N N N -24.834 26.164 25.325 2.263  -0.036 -0.488 C35  WCJ 26 
WCJ C36  C27 C 0 1 Y N N N N N -24.282 25.813 24.096 3.134  1.018  -0.323 C36  WCJ 27 
WCJ C38  C28 C 0 1 N N N N N N -23.062 24.977 18.692 7.556  3.571  0.655  C38  WCJ 28 
WCJ F14  F1  F 0 1 N N N N N N -27.357 21.968 25.650 -2.756 1.032  -2.286 F14  WCJ 29 
WCJ N04  N1  N 0 1 N N N N N N -24.266 25.692 21.606 4.978  2.050  0.844  N04  WCJ 30 
WCJ N18  N2  N 0 1 Y N N N N N -29.932 19.152 25.765 -5.063 3.530  0.108  N18  WCJ 31 
WCJ N23  N3  N 0 1 Y N N N N N -28.612 20.271 27.506 -4.825 1.274  0.543  N23  WCJ 32 
WCJ N26  N4  N 0 1 Y N N N N N -26.183 28.332 27.447 1.778  -3.612 0.132  N26  WCJ 33 
WCJ N31  N5  N 0 1 N N N N N N -29.229 26.000 30.371 -2.852 -3.330 -0.351 N31  WCJ 34 
WCJ N32  N6  N 0 1 Y N N N N N -28.264 28.049 31.017 -1.809 -5.446 -0.372 N32  WCJ 35 
WCJ N34  N7  N 0 1 Y N N N N N -26.696 29.345 29.645 0.478  -5.711 -0.141 N34  WCJ 36 
WCJ O16  O1  O 0 1 N N N N N N -30.063 21.495 26.120 -2.977 2.545  -0.007 O16  WCJ 37 
WCJ O37  O2  O 0 1 N N N N N N -23.815 27.810 20.828 5.052  2.422  -1.342 O37  WCJ 38 
WCJ H203 H1  H 0 0 N N N N N N -30.531 16.962 24.601 -7.274 5.213  1.152  H203 WCJ 39 
WCJ H201 H2  H 0 0 N N N N N N -28.916 16.238 24.908 -6.776 5.377  -0.549 H201 WCJ 40 
WCJ H202 H3  H 0 0 N N N N N N -30.253 15.981 26.080 -8.222 4.426  -0.133 H202 WCJ 41 
WCJ H211 H4  H 0 0 N N N N N N -27.995 16.928 27.465 -8.005 2.178  0.835  H211 WCJ 42 
WCJ H221 H5  H 0 0 N N N N N N -27.377 19.013 28.636 -6.538 0.182  1.029  H221 WCJ 43 
WCJ H241 H6  H 0 0 N N N N N N -31.189 23.646 27.321 -1.697 1.590  2.065  H241 WCJ 44 
WCJ H011 H7  H 0 0 N N N N N N -23.084 28.403 18.746 5.642  4.885  -1.892 H011 WCJ 45 
WCJ H013 H8  H 0 0 N N N N N N -22.382 27.356 17.466 7.199  5.476  -1.263 H013 WCJ 46 
WCJ H012 H9  H 0 0 N N N N N N -24.153 27.340 17.768 7.097  3.866  -2.016 H012 WCJ 47 
WCJ H021 H10 H 0 0 N N N N N N -21.915 26.369 19.578 5.728  4.707  0.580  H021 WCJ 48 
WCJ H061 H11 H 0 0 N N N N N N -26.702 27.017 22.059 4.943  -0.162 2.287  H061 WCJ 49 
WCJ H071 H12 H 0 0 N N N N N N -27.676 27.626 24.256 3.397  -2.051 2.003  H071 WCJ 50 
WCJ H121 H13 H 0 0 N N N N N N -26.363 24.232 26.372 -1.301 -1.118 -2.046 H121 WCJ 51 
WCJ H251 H14 H 0 0 N N N N N N -30.059 25.738 27.912 -0.368 -0.479 2.091  H251 WCJ 52 
WCJ H273 H15 H 0 0 N N N N N N -25.095 30.128 27.599 3.379  -4.304 1.296  H273 WCJ 53 
WCJ H271 H16 H 0 0 N N N N N N -24.294 28.824 26.659 3.246  -5.041 -0.319 H271 WCJ 54 
WCJ H272 H17 H 0 0 N N N N N N -25.679 29.723 25.949 3.843  -3.373 -0.148 H272 WCJ 55 
WCJ H331 H18 H 0 0 N N N N N N -27.372 29.866 31.523 -0.845 -7.276 -0.384 H331 WCJ 56 
WCJ H351 H19 H 0 0 N N N N N N -24.293 25.921 26.227 1.513  -0.002 -1.264 H351 WCJ 57 
WCJ H361 H20 H 0 0 N N N N N N -23.324 25.315 24.079 3.066  1.880  -0.971 H361 WCJ 58 
WCJ H381 H21 H 0 0 N N N N N N -22.923 24.207 19.465 8.185  4.451  0.792  H381 WCJ 59 
WCJ H382 H22 H 0 0 N N N N N N -24.052 24.855 18.227 7.331  3.131  1.626  H382 WCJ 60 
WCJ H1   H23 H 0 1 N N N N N N -22.281 24.872 17.925 8.082  2.842  0.039  H1   WCJ 61 
WCJ H041 H24 H 0 0 N N N N N N -24.184 24.719 21.392 5.294  2.285  1.730  H041 WCJ 62 
WCJ H312 H25 H 0 0 N N N N N N -29.620 26.139 31.281 -2.774 -2.366 -0.281 H312 WCJ 63 
WCJ H311 H26 H 0 0 N N N N N N -29.966 25.949 29.697 -3.724 -3.739 -0.471 H311 WCJ 64 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
WCJ C01 C02  SING N N 1  
WCJ C38 C02  SING N N 2  
WCJ C02 C03  SING N N 3  
WCJ C03 O37  DOUB N N 4  
WCJ C03 N04  SING N N 5  
WCJ N04 C05  SING N N 6  
WCJ C05 C06  DOUB Y N 7  
WCJ C05 C36  SING Y N 8  
WCJ C06 C07  SING Y N 9  
WCJ C36 C35  DOUB Y N 10 
WCJ C07 C08  DOUB Y N 11 
WCJ C35 C08  SING Y N 12 
WCJ C20 C19  SING N N 13 
WCJ C08 C09  SING N N 14 
WCJ F14 C13  SING N N 15 
WCJ N18 C19  DOUB Y N 16 
WCJ N18 C17  SING Y N 17 
WCJ O16 C17  SING N N 18 
WCJ O16 C15  SING N N 19 
WCJ C19 C21  SING Y N 20 
WCJ C13 C15  DOUB Y N 21 
WCJ C13 C12  SING Y N 22 
WCJ C17 N23  DOUB Y N 23 
WCJ C15 C24  SING Y N 24 
WCJ C12 C11  DOUB Y N 25 
WCJ C09 N26  SING Y N 26 
WCJ C09 C10  DOUB Y N 27 
WCJ C27 N26  SING N N 28 
WCJ C24 C25  DOUB Y N 29 
WCJ C21 C22  DOUB Y N 30 
WCJ C11 C25  SING Y N 31 
WCJ C11 C10  SING N N 32 
WCJ N26 C28  SING Y N 33 
WCJ N23 C22  SING Y N 34 
WCJ C10 C29  SING Y N 35 
WCJ C28 C29  DOUB Y N 36 
WCJ C28 N34  SING Y N 37 
WCJ C29 C30  SING Y N 38 
WCJ N34 C33  DOUB Y N 39 
WCJ C30 N31  SING N N 40 
WCJ C30 N32  DOUB Y N 41 
WCJ C33 N32  SING Y N 42 
WCJ C20 H203 SING N N 43 
WCJ C20 H201 SING N N 44 
WCJ C20 H202 SING N N 45 
WCJ C21 H211 SING N N 46 
WCJ C22 H221 SING N N 47 
WCJ C24 H241 SING N N 48 
WCJ C01 H011 SING N N 49 
WCJ C01 H013 SING N N 50 
WCJ C01 H012 SING N N 51 
WCJ C02 H021 SING N N 52 
WCJ C06 H061 SING N N 53 
WCJ C07 H071 SING N N 54 
WCJ C12 H121 SING N N 55 
WCJ C25 H251 SING N N 56 
WCJ C27 H273 SING N N 57 
WCJ C27 H271 SING N N 58 
WCJ C27 H272 SING N N 59 
WCJ C33 H331 SING N N 60 
WCJ C35 H351 SING N N 61 
WCJ C36 H361 SING N N 62 
WCJ C38 H381 SING N N 63 
WCJ C38 H382 SING N N 64 
WCJ C38 H1   SING N N 65 
WCJ N04 H041 SING N N 66 
WCJ N31 H312 SING N N 67 
WCJ N31 H311 SING N N 68 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
WCJ SMILES           ACDLabs              12.01 "CC(C)C(=O)Nc1ccc(cc1)c1c(c2c(N)ncnc2n1C)c1ccc(Oc2nc(C)ccn2)c(F)c1"                                                                                                                 
WCJ InChI            InChI                1.06  "InChI=1S/C28H26FN7O2/c1-15(2)27(37)35-19-8-5-17(6-9-19)24-22(23-25(30)32-14-33-26(23)36(24)4)18-7-10-21(20(29)13-18)38-28-31-12-11-16(3)34-28/h5-15H,1-4H3,(H,35,37)(H2,30,32,33)" 
WCJ InChIKey         InChI                1.06  YMFWNWAYNXOSLG-UHFFFAOYSA-N                                                                                                                                                         
WCJ SMILES_CANONICAL CACTVS               3.385 "CC(C)C(=O)Nc1ccc(cc1)c2n(C)c3ncnc(N)c3c2c4ccc(Oc5nccc(C)n5)c(F)c4"                                                                                                                 
WCJ SMILES           CACTVS               3.385 "CC(C)C(=O)Nc1ccc(cc1)c2n(C)c3ncnc(N)c3c2c4ccc(Oc5nccc(C)n5)c(F)c4"                                                                                                                 
WCJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccnc(n1)Oc2ccc(cc2F)c3c4c(ncnc4n(c3c5ccc(cc5)NC(=O)C(C)C)C)N"                                                                                                                   
WCJ SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1ccnc(n1)Oc2ccc(cc2F)c3c4c(ncnc4n(c3c5ccc(cc5)NC(=O)C(C)C)C)N"                                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
WCJ "SYSTEMATIC NAME" ACDLabs              12.01 "N-{4-[(5P)-4-amino-5-{3-fluoro-4-[(4-methylpyrimidin-2-yl)oxy]phenyl}-7-methyl-7H-pyrrolo[2,3-d]pyrimidin-6-yl]phenyl}-2-methylpropanamide" 
WCJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[4-[4-azanyl-5-[3-fluoranyl-4-(4-methylpyrimidin-2-yl)oxy-phenyl]-7-methyl-pyrrolo[2,3-d]pyrimidin-6-yl]phenyl]-2-methyl-propanamide"  
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
WCJ "Create component"   2023-05-11 RCSB 
WCJ "Initial release"    2023-06-07 RCSB 
WCJ "Other modification" 2023-09-08 RCSB 
WCJ "Modify PCM"         2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            WCJ 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C38 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
