data_XNJ
#

_chem_comp.id                                   XNJ
_chem_comp.name                                 "N-(4-methyl-3-{[4-(pyridin-3-yl)-1,3-thiazol-2-yl]amino}phenyl)-4-[(piperazin-1-yl)methyl]benzamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C27 H28 N6 O S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "demethylated masitinib"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-12-22
_chem_comp.pdbx_modified_date                   2020-12-25
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       484.616
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    XNJ
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7L5D
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
XNJ  CBE  C1   C  0  1  N  N  N  19.206   5.811  24.259   8.699   2.084  -0.460  CBE  XNJ   1  
XNJ  CBF  C2   C  0  1  N  N  N  19.898   6.132  22.956   9.792   1.561   0.475  CBF  XNJ   2  
XNJ  NBG  N1   N  0  1  N  N  N  18.963   6.706  21.997   9.370   1.746   1.870  NBG  XNJ   3  
XNJ  CBH  C3   C  0  1  N  N  N  18.378   7.913  22.565   8.116   1.029   2.138  CBH  XNJ   4  
XNJ  CBI  C4   C  0  1  N  N  N  17.679   7.615  23.869   7.023   1.552   1.204  CBI  XNJ   5  
XNJ  NBD  N2   N  0  1  N  N  N  18.601   7.014  24.834   7.445   1.367  -0.192  NBD  XNJ   6  
XNJ  CBC  C5   C  0  1  N  N  N  17.958   6.752  26.129   6.388   1.789  -1.122  CBC  XNJ   7  
XNJ  CAZ  C6   C  0  1  Y  N  N  16.708   5.901  26.067   5.202   0.870  -0.984  CAZ  XNJ   8  
XNJ  CBA  C7   C  0  1  Y  N  N  15.453   6.484  25.924   5.120  -0.271  -1.763  CBA  XNJ   9  
XNJ  CBB  C8   C  0  1  Y  N  N  14.309   5.708  25.871   4.037  -1.117  -1.642  CBB  XNJ  10  
XNJ  CAY  C9   C  0  1  Y  N  N  16.783   4.518  26.193   4.202   1.168  -0.076  CAY  XNJ  11  
XNJ  CAX  C10  C  0  1  Y  N  N  15.637   3.742  26.149   3.113   0.330   0.056  CAX  XNJ  12  
XNJ  CAV  C11  C  0  1  Y  N  N  14.392   4.330  25.980   3.022  -0.819  -0.731  CAV  XNJ  13  
XNJ  CAU  C12  C  0  1  N  N  N  13.169   3.473  25.943   1.858  -1.721  -0.596  CAU  XNJ  14  
XNJ  OAW  O1   O  0  1  N  N  N  13.202   2.317  26.349   1.784  -2.723  -1.279  OAW  XNJ  15  
XNJ  NAT  N3   N  0  1  N  N  N  12.061   4.023  25.401   0.880  -1.431   0.285  NAT  XNJ  16  
XNJ  CAO  C13  C  0  1  Y  N  N  10.840   3.345  25.215  -0.267  -2.229   0.344  CAO  XNJ  17  
XNJ  CAN  C14  C  0  1  Y  N  N  10.504   2.878  23.953  -1.503  -1.652   0.599  CAN  XNJ  18  
XNJ  CAP  C15  C  0  1  Y  N  N   9.987   3.121  26.289  -0.170  -3.600   0.142  CAP  XNJ  19  
XNJ  CAQ  C16  C  0  1  Y  N  N   8.802   2.436  26.096  -1.303  -4.390   0.200  CAQ  XNJ  20  
XNJ  CAR  C17  C  0  1  Y  N  N   8.438   1.962  24.835  -2.534  -3.820   0.459  CAR  XNJ  21  
XNJ  CAS  C18  C  0  1  N  N  N   7.138   1.229  24.662  -3.766  -4.685   0.522  CAS  XNJ  22  
XNJ  CAM  C19  C  0  1  Y  N  N   9.303   2.199  23.763  -2.638  -2.448   0.657  CAM  XNJ  23  
XNJ  NAL  N4   N  0  1  N  N  N   8.966   1.708  22.484  -3.885  -1.871   0.914  NAL  XNJ  24  
XNJ  CAJ  C20  C  0  1  Y  N  N   9.800   1.211  21.533  -4.239  -0.682   0.296  CAJ  XNJ  25  
XNJ  NAK  N5   N  0  1  Y  N  N   9.386   0.906  20.339  -5.314  -0.001   0.543  NAK  XNJ  26  
XNJ  SAI  S1   S  0  1  Y  N  N  11.489   0.899  21.809  -3.294   0.141  -0.941  SAI  XNJ  27  
XNJ  CAH  C21  C  0  1  Y  N  N  11.612   0.253  20.223  -4.513   1.411  -1.030  CAH  XNJ  28  
XNJ  CAG  C22  C  0  1  Y  N  N  10.414   0.323  19.595  -5.486   1.125  -0.148  CAG  XNJ  29  
XNJ  CAF  C23  C  0  1  Y  N  N  10.119  -0.164  18.244  -6.673   1.995   0.034  CAF  XNJ  30  
XNJ  CAA  C24  C  0  1  Y  N  N  11.072  -0.840  17.491  -7.663   1.661   0.963  CAA  XNJ  31  
XNJ  CAB  C25  C  0  1  Y  N  N  10.761  -1.302  16.232  -8.751   2.506   1.095  CAB  XNJ  32  
XNJ  CAC  C26  C  0  1  Y  N  N   9.496  -1.066  15.746  -8.824   3.643   0.311  CAC  XNJ  33  
XNJ  NAD  N6   N  0  1  Y  N  N   8.549  -0.432  16.452  -7.875   3.932  -0.558  NAD  XNJ  34  
XNJ  CAE  C27  C  0  1  Y  N  N   8.868   0.010  17.673  -6.818   3.162  -0.715  CAE  XNJ  35  
XNJ  H1   H1   H  0  1  N  N  N  18.420   5.064  24.076   8.552   3.150  -0.286  H1   XNJ  36  
XNJ  H2   H2   H  0  1  N  N  N  19.942   5.403  24.968   8.997   1.922  -1.495  H2   XNJ  37  
XNJ  H3   H3   H  0  1  N  N  N  20.322   5.208  22.536   9.958   0.501   0.283  H3   XNJ  38  
XNJ  H4   H4   H  0  1  N  N  N  20.707   6.853  23.146  10.716   2.111   0.298  H4   XNJ  39  
XNJ  H5   H5   H  0  1  N  N  N  18.240   6.045  21.798   9.281   2.726   2.094  H5   XNJ  40  
XNJ  H7   H7   H  0  1  N  N  N  19.176   8.649  22.745   8.263  -0.037   1.965  H7   XNJ  41  
XNJ  H8   H8   H  0  1  N  N  N  17.649   8.329  21.853   7.818   1.192   3.174  H8   XNJ  42  
XNJ  H9   H9   H  0  1  N  N  N  17.282   8.552  24.287   6.099   1.002   1.380  H9   XNJ  43  
XNJ  H10  H10  H  0  1  N  N  N  16.850   6.917  23.681   6.857   2.612   1.396  H10  XNJ  44  
XNJ  H12  H12  H  0  1  N  N  N  18.687   6.239  26.774   6.086   2.810  -0.889  H12  XNJ  45  
XNJ  H13  H13  H  0  1  N  N  N  17.689   7.720  26.577   6.765   1.745  -2.144  H13  XNJ  46  
XNJ  H14  H14  H  0  1  N  N  N  15.371   7.559  25.853   5.906  -0.500  -2.467  H14  XNJ  47  
XNJ  H15  H15  H  0  1  N  N  N  13.346   6.180  25.744   3.974  -2.007  -2.250  H15  XNJ  48  
XNJ  H16  H16  H  0  1  N  N  N  17.745   4.045  26.326   4.274   2.057   0.533  H16  XNJ  49  
XNJ  H17  H17  H  0  1  N  N  N  15.713   2.669  26.247   2.333   0.564   0.765  H17  XNJ  50  
XNJ  H18  H18  H  0  1  N  N  N  12.111   4.979  25.111   0.971  -0.668   0.877  H18  XNJ  51  
XNJ  H19  H19  H  0  1  N  N  N  11.172   3.040  23.120  -1.581  -0.586   0.752  H19  XNJ  52  
XNJ  H20  H20  H  0  1  N  N  N  10.249   3.481  27.273   0.791  -4.049  -0.062  H20  XNJ  53  
XNJ  H21  H21  H  0  1  N  N  N   8.146   2.265  26.937  -1.225  -5.456   0.043  H21  XNJ  54  
XNJ  H22  H22  H  0  1  N  N  N   7.301   0.152  24.814  -3.915  -5.032   1.544  H22  XNJ  55  
XNJ  H23  H23  H  0  1  N  N  N   6.409   1.597  25.399  -4.633  -4.106   0.204  H23  XNJ  56  
XNJ  H24  H24  H  0  1  N  N  N   6.752   1.401  23.646  -3.641  -5.544  -0.138  H24  XNJ  57  
XNJ  H25  H25  H  0  1  N  N  N   7.994   1.728  22.248  -4.502  -2.303   1.525  H25  XNJ  58  
XNJ  H26  H26  H  0  1  N  N  N  12.515  -0.151  19.789  -4.480   2.275  -1.677  H26  XNJ  59  
XNJ  H27  H27  H  0  1  N  N  N  12.060  -1.003  17.895  -7.580   0.766   1.562  H27  XNJ  60  
XNJ  H28  H28  H  0  1  N  N  N  11.491  -1.836  15.641  -9.535   2.280   1.802  H28  XNJ  61  
XNJ  H29  H29  H  0  1  N  N  N   9.255  -1.407  14.750  -9.672   4.304   0.411  H29  XNJ  62  
XNJ  H30  H30  H  0  1  N  N  N   8.112   0.529  18.244  -6.061   3.432  -1.436  H30  XNJ  63  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
XNJ  CAC  CAB  DOUB  Y  N   1  
XNJ  CAC  NAD  SING  Y  N   2  
XNJ  CAB  CAA  SING  Y  N   3  
XNJ  NAD  CAE  DOUB  Y  N   4  
XNJ  CAA  CAF  DOUB  Y  N   5  
XNJ  CAE  CAF  SING  Y  N   6  
XNJ  CAF  CAG  SING  N  N   7  
XNJ  CAG  CAH  DOUB  Y  N   8  
XNJ  CAG  NAK  SING  Y  N   9  
XNJ  CAH  SAI  SING  Y  N  10  
XNJ  NAK  CAJ  DOUB  Y  N  11  
XNJ  CAJ  SAI  SING  Y  N  12  
XNJ  CAJ  NAL  SING  N  N  13  
XNJ  NBG  CBH  SING  N  N  14  
XNJ  NBG  CBF  SING  N  N  15  
XNJ  NAL  CAM  SING  N  N  16  
XNJ  CBH  CBI  SING  N  N  17  
XNJ  CBF  CBE  SING  N  N  18  
XNJ  CAM  CAN  DOUB  Y  N  19  
XNJ  CAM  CAR  SING  Y  N  20  
XNJ  CBI  NBD  SING  N  N  21  
XNJ  CAN  CAO  SING  Y  N  22  
XNJ  CBE  NBD  SING  N  N  23  
XNJ  CAS  CAR  SING  N  N  24  
XNJ  NBD  CBC  SING  N  N  25  
XNJ  CAR  CAQ  DOUB  Y  N  26  
XNJ  CAO  NAT  SING  N  N  27  
XNJ  CAO  CAP  DOUB  Y  N  28  
XNJ  NAT  CAU  SING  N  N  29  
XNJ  CBB  CBA  DOUB  Y  N  30  
XNJ  CBB  CAV  SING  Y  N  31  
XNJ  CBA  CAZ  SING  Y  N  32  
XNJ  CAU  CAV  SING  N  N  33  
XNJ  CAU  OAW  DOUB  N  N  34  
XNJ  CAV  CAX  DOUB  Y  N  35  
XNJ  CAZ  CBC  SING  N  N  36  
XNJ  CAZ  CAY  DOUB  Y  N  37  
XNJ  CAQ  CAP  SING  Y  N  38  
XNJ  CAX  CAY  SING  Y  N  39  
XNJ  CBE  H1   SING  N  N  40  
XNJ  CBE  H2   SING  N  N  41  
XNJ  CBF  H3   SING  N  N  42  
XNJ  CBF  H4   SING  N  N  43  
XNJ  NBG  H5   SING  N  N  44  
XNJ  CBH  H7   SING  N  N  45  
XNJ  CBH  H8   SING  N  N  46  
XNJ  CBI  H9   SING  N  N  47  
XNJ  CBI  H10  SING  N  N  48  
XNJ  CBC  H12  SING  N  N  49  
XNJ  CBC  H13  SING  N  N  50  
XNJ  CBA  H14  SING  N  N  51  
XNJ  CBB  H15  SING  N  N  52  
XNJ  CAY  H16  SING  N  N  53  
XNJ  CAX  H17  SING  N  N  54  
XNJ  NAT  H18  SING  N  N  55  
XNJ  CAN  H19  SING  N  N  56  
XNJ  CAP  H20  SING  N  N  57  
XNJ  CAQ  H21  SING  N  N  58  
XNJ  CAS  H22  SING  N  N  59  
XNJ  CAS  H23  SING  N  N  60  
XNJ  CAS  H24  SING  N  N  61  
XNJ  NAL  H25  SING  N  N  62  
XNJ  CAH  H26  SING  N  N  63  
XNJ  CAA  H27  SING  N  N  64  
XNJ  CAB  H28  SING  N  N  65  
XNJ  CAC  H29  SING  N  N  66  
XNJ  CAE  H30  SING  N  N  67  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
XNJ  SMILES            ACDLabs               12.01  "C1N(CCNC1)Cc2ccc(cc2)C(=O)Nc3ccc(C)c(c3)Nc4scc(n4)c5cccnc5"  
XNJ  InChI             InChI                 1.03   "InChI=1S/C27H28N6OS/c1-19-4-9-23(15-24(19)31-27-32-25(18-35-27)22-3-2-10-29-16-22)30-26(34)21-7-5-20(6-8-21)17-33-13-11-28-12-14-33/h2-10,15-16,18,28H,11-14,17H2,1H3,(H,30,34)(H,31,32)"  
XNJ  InChIKey          InChI                 1.03   LBWSNUMFQJZFGI-UHFFFAOYSA-N  
XNJ  SMILES_CANONICAL  CACTVS                3.385  "Cc1ccc(NC(=O)c2ccc(CN3CCNCC3)cc2)cc1Nc4scc(n4)c5cccnc5"  
XNJ  SMILES            CACTVS                3.385  "Cc1ccc(NC(=O)c2ccc(CN3CCNCC3)cc2)cc1Nc4scc(n4)c5cccnc5"  
XNJ  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1ccc(cc1Nc2nc(cs2)c3cccnc3)NC(=O)c4ccc(cc4)CN5CCNCC5"  
XNJ  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1ccc(cc1Nc2nc(cs2)c3cccnc3)NC(=O)c4ccc(cc4)CN5CCNCC5"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
XNJ  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-(4-methyl-3-{[4-(pyridin-3-yl)-1,3-thiazol-2-yl]amino}phenyl)-4-[(piperazin-1-yl)methyl]benzamide"  
XNJ  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "~{N}-[4-methyl-3-[(4-pyridin-3-yl-1,3-thiazol-2-yl)amino]phenyl]-4-(piperazin-1-ylmethyl)benzamide"  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     XNJ
_pdbx_chem_comp_synonyms.name        "demethylated masitinib"
_pdbx_chem_comp_synonyms.provenance  AUTHOR
_pdbx_chem_comp_synonyms.type        ?
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
XNJ  "Create component"  2020-12-22  RCSB  
XNJ  "Initial release"   2020-12-30  RCSB  
##
