data_YCJ
#

_chem_comp.id                                   YCJ
_chem_comp.name                                 "(5-methyl-2-pyridin-4-yl-phenyl)-[4-oxidanyl-4-(phenylmethyl)piperidin-1-yl]methanone"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C25 H26 N2 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-02-18
_chem_comp.pdbx_modified_date                   2021-08-20
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       386.486
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    YCJ
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7LS3
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YCJ  C4   C1   C  0  1  Y  N  N  17.428  -3.785  -22.551   4.633  -1.301  -0.357  C4   YCJ   1  
YCJ  C5   C2   C  0  1  Y  N  N  19.783   4.718  -20.640  -5.745  -0.074  -1.018  C5   YCJ   2  
YCJ  C6   C3   C  0  1  Y  N  N  21.225   3.052  -19.774  -5.248   0.209   1.307  C6   YCJ   3  
YCJ  C7   C4   C  0  1  Y  N  N  18.785  -3.955  -22.767   4.386  -2.655  -0.254  C7   YCJ   4  
YCJ  C8   C5   C  0  1  Y  N  N  14.735  -3.449  -21.766   3.082   1.893  -0.930  C8   YCJ   5  
YCJ  C10  C6   C  0  1  Y  N  N  19.079  -1.606  -22.956   2.139  -2.220   0.467  C10  YCJ   6  
YCJ  C13  C7   C  0  1  Y  N  N  16.885  -2.518  -22.511   3.633  -0.385  -0.043  C13  YCJ   7  
YCJ  C15  C8   C  0  1  Y  N  N  17.737  -1.445  -22.702   2.373  -0.848   0.374  C15  YCJ   8  
YCJ  C17  C9   C  0  1  Y  N  N  19.608  -2.869  -22.982   3.146  -3.112   0.162  C17  YCJ   9  
YCJ  C20  C10  C  0  1  N  N  N  18.468   0.843  -19.485  -1.454  -1.744  -0.500  C20  YCJ  10  
YCJ  C21  C11  C  0  1  N  N  N  16.432   1.809  -21.381  -0.935   1.037   0.316  C21  YCJ  11  
YCJ  C22  C12  C  0  1  N  N  N  17.478  -0.059  -20.191  -0.154  -1.038  -0.899  C22  YCJ  12  
YCJ  C24  C13  C  0  1  N  N  N  21.066  -3.035  -23.238   2.890  -4.594   0.264  C24  YCJ  13  
YCJ  C1   C14  C  0  1  Y  N  N  21.994   4.464  -21.538  -7.026   1.459   0.303  C1   YCJ  14  
YCJ  C2   C15  C  0  1  Y  N  N  20.770   5.105  -21.524  -6.764   0.855  -0.913  C2   YCJ  15  
YCJ  C3   C16  C  0  1  Y  N  N  22.220   3.428  -20.656  -6.262   1.142   1.411  C3   YCJ  16  
YCJ  C9   C17  C  0  1  Y  N  N  14.758  -1.377  -22.903   4.966   1.657   0.536  C9   YCJ  17  
YCJ  C11  C18  C  0  1  Y  N  N  13.364  -3.356  -21.701   3.363   3.243  -0.999  C11  YCJ  18  
YCJ  C12  C19  C  0  1  Y  N  N  13.388  -1.383  -22.794   5.182   3.014   0.403  C12  YCJ  19  
YCJ  C14  C20  C  0  1  Y  N  N  15.449  -2.435  -22.367   3.897   1.070  -0.146  C14  YCJ  20  
YCJ  C16  C21  C  0  1  Y  N  N  19.999   3.677  -19.758  -4.990  -0.399   0.093  C16  YCJ  21  
YCJ  C18  C22  C  0  1  N  N  N  17.281  -0.052  -22.689   1.299   0.112   0.700  C18  YCJ  22  
YCJ  C19  C23  C  0  1  N  N  N  17.330   2.791  -20.665  -2.226   0.308   0.702  C19  YCJ  23  
YCJ  C23  C24  C  0  1  N  N  N  17.922   2.259  -19.370  -2.576  -0.711  -0.385  C23  YCJ  24  
YCJ  C25  C25  C  0  1  N  N  N  18.934   3.242  -18.792  -3.884  -1.417  -0.020  C25  YCJ  25  
YCJ  N26  N1   N  0  1  Y  N  N  12.667  -2.337  -22.208   4.386   3.756  -0.343  N26  YCJ  26  
YCJ  N27  N2   N  0  1  N  N  N  17.071   0.515  -21.453   0.114   0.040   0.062  N27  YCJ  27  
YCJ  O28  O1   O  0  1  N  N  N  17.119   0.519  -23.760   1.485   0.969   1.542  O28  YCJ  28  
YCJ  O29  O2   O  0  1  N  N  N  16.852   2.157  -18.441  -2.733  -0.037  -1.636  O29  YCJ  29  
YCJ  H1   H1   H  0  1  N  N  N  16.793  -4.647  -22.413   5.603  -0.952  -0.678  H1   YCJ  30  
YCJ  H2   H2   H  0  1  N  N  N  18.834   5.233  -20.638  -5.543  -0.549  -1.967  H2   YCJ  31  
YCJ  H3   H3   H  0  1  N  N  N  21.414   2.247  -19.079  -4.658  -0.046   2.175  H3   YCJ  32  
YCJ  H4   H4   H  0  1  N  N  N  19.204  -4.950  -22.767   5.164  -3.363  -0.499  H4   YCJ  33  
YCJ  H5   H5   H  0  1  N  N  N  15.245  -4.306  -21.351   2.243   1.480  -1.470  H5   YCJ  34  
YCJ  H6   H6   H  0  1  N  N  N  19.708  -0.746  -23.133   1.171  -2.583   0.779  H6   YCJ  35  
YCJ  H7   H7   H  0  1  N  N  N  18.661   0.448  -18.477  -1.714  -2.483  -1.258  H7   YCJ  36  
YCJ  H8   H8   H  0  1  N  N  N  19.408   0.864  -20.056  -1.317  -2.241   0.461  H8   YCJ  37  
YCJ  H9   H9   H  0  1  N  N  N  16.233   2.174  -22.399  -1.104   1.627  -0.585  H9   YCJ  38  
YCJ  H10  H10  H  0  1  N  N  N  15.483   1.716  -20.832  -0.629   1.694   1.130  H10  YCJ  39  
YCJ  H11  H11  H  0  1  N  N  N  16.592  -0.192  -19.553   0.669  -1.753  -0.886  H11  YCJ  40  
YCJ  H12  H12  H  0  1  N  N  N  17.948  -1.037  -20.374  -0.258  -0.620  -1.901  H12  YCJ  41  
YCJ  H13  H13  H  0  1  N  N  N  21.611  -3.017  -22.283   2.518  -4.965  -0.691  H13  YCJ  42  
YCJ  H14  H14  H  0  1  N  N  N  21.242  -3.996  -23.743   3.818  -5.107   0.516  H14  YCJ  43  
YCJ  H15  H15  H  0  1  N  N  N  21.422  -2.214  -23.878   2.148  -4.782   1.040  H15  YCJ  44  
YCJ  H16  H16  H  0  1  N  N  N  22.764   4.770  -22.231  -7.822   2.184   0.384  H16  YCJ  45  
YCJ  H17  H17  H  0  1  N  N  N  20.584   5.917  -22.211  -7.355   1.109  -1.781  H17  YCJ  46  
YCJ  H18  H18  H  0  1  N  N  N  23.170   2.913  -20.655  -6.468   1.614   2.360  H18  YCJ  47  
YCJ  H19  H19  H  0  1  N  N  N  15.274  -0.566  -23.395   5.622   1.056   1.148  H19  YCJ  48  
YCJ  H20  H20  H  0  1  N  N  N  12.821  -4.152  -21.212   2.737   3.887  -1.598  H20  YCJ  49  
YCJ  H21  H21  H  0  1  N  N  N  12.853  -0.546  -23.218   6.005   3.476   0.927  H21  YCJ  50  
YCJ  H22  H22  H  0  1  N  N  N  18.157   3.058  -21.339  -2.082  -0.208   1.651  H22  YCJ  51  
YCJ  H23  H23  H  0  1  N  N  N  16.742   3.691  -20.432  -3.036   1.030   0.799  H23  YCJ  52  
YCJ  H24  H24  H  0  1  N  N  N  19.425   2.764  -17.931  -3.764  -1.931   0.934  H24  YCJ  53  
YCJ  H25  H25  H  0  1  N  N  N  18.390   4.136  -18.454  -4.134  -2.141  -0.794  H25  YCJ  54  
YCJ  H26  H26  H  0  1  N  N  N  17.181   1.826  -17.613  -3.429   0.634  -1.637  H26  YCJ  55  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YCJ  O28  C18  DOUB  N  N   1  
YCJ  C24  C17  SING  N  N   2  
YCJ  C17  C10  DOUB  Y  N   3  
YCJ  C17  C7   SING  Y  N   4  
YCJ  C10  C15  SING  Y  N   5  
YCJ  C9   C12  DOUB  Y  N   6  
YCJ  C9   C14  SING  Y  N   7  
YCJ  C12  N26  SING  Y  N   8  
YCJ  C7   C4   DOUB  Y  N   9  
YCJ  C15  C18  SING  N  N  10  
YCJ  C15  C13  DOUB  Y  N  11  
YCJ  C18  N27  SING  N  N  12  
YCJ  C4   C13  SING  Y  N  13  
YCJ  C13  C14  SING  N  N  14  
YCJ  C14  C8   DOUB  Y  N  15  
YCJ  N26  C11  DOUB  Y  N  16  
YCJ  C8   C11  SING  Y  N  17  
YCJ  C1   C2   DOUB  Y  N  18  
YCJ  C1   C3   SING  Y  N  19  
YCJ  C2   C5   SING  Y  N  20  
YCJ  N27  C21  SING  N  N  21  
YCJ  N27  C22  SING  N  N  22  
YCJ  C21  C19  SING  N  N  23  
YCJ  C19  C23  SING  N  N  24  
YCJ  C3   C6   DOUB  Y  N  25  
YCJ  C5   C16  DOUB  Y  N  26  
YCJ  C22  C20  SING  N  N  27  
YCJ  C6   C16  SING  Y  N  28  
YCJ  C16  C25  SING  N  N  29  
YCJ  C20  C23  SING  N  N  30  
YCJ  C23  C25  SING  N  N  31  
YCJ  C23  O29  SING  N  N  32  
YCJ  C4   H1   SING  N  N  33  
YCJ  C5   H2   SING  N  N  34  
YCJ  C6   H3   SING  N  N  35  
YCJ  C7   H4   SING  N  N  36  
YCJ  C8   H5   SING  N  N  37  
YCJ  C10  H6   SING  N  N  38  
YCJ  C20  H7   SING  N  N  39  
YCJ  C20  H8   SING  N  N  40  
YCJ  C21  H9   SING  N  N  41  
YCJ  C21  H10  SING  N  N  42  
YCJ  C22  H11  SING  N  N  43  
YCJ  C22  H12  SING  N  N  44  
YCJ  C24  H13  SING  N  N  45  
YCJ  C24  H14  SING  N  N  46  
YCJ  C24  H15  SING  N  N  47  
YCJ  C1   H16  SING  N  N  48  
YCJ  C2   H17  SING  N  N  49  
YCJ  C3   H18  SING  N  N  50  
YCJ  C9   H19  SING  N  N  51  
YCJ  C11  H20  SING  N  N  52  
YCJ  C12  H21  SING  N  N  53  
YCJ  C19  H22  SING  N  N  54  
YCJ  C19  H23  SING  N  N  55  
YCJ  C25  H24  SING  N  N  56  
YCJ  C25  H25  SING  N  N  57  
YCJ  O29  H26  SING  N  N  58  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YCJ  InChI             InChI                 1.03   "InChI=1S/C25H26N2O2/c1-19-7-8-22(21-9-13-26-14-10-21)23(17-19)24(28)27-15-11-25(29,12-16-27)18-20-5-3-2-4-6-20/h2-10,13-14,17,29H,11-12,15-16,18H2,1H3"  
YCJ  InChIKey          InChI                 1.03   SUPCEIFGZKXNGG-UHFFFAOYSA-N  
YCJ  SMILES_CANONICAL  CACTVS                3.385  "Cc1ccc(c2ccncc2)c(c1)C(=O)N3CCC(O)(CC3)Cc4ccccc4"  
YCJ  SMILES            CACTVS                3.385  "Cc1ccc(c2ccncc2)c(c1)C(=O)N3CCC(O)(CC3)Cc4ccccc4"  
YCJ  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1ccc(c(c1)C(=O)N2CCC(CC2)(Cc3ccccc3)O)c4ccncc4"  
YCJ  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1ccc(c(c1)C(=O)N2CCC(CC2)(Cc3ccccc3)O)c4ccncc4"  
#
_pdbx_chem_comp_identifier.comp_id          YCJ
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(5-methyl-2-pyridin-4-yl-phenyl)-[4-oxidanyl-4-(phenylmethyl)piperidin-1-yl]methanone"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YCJ  "Create component"  2021-02-18  RCSB  
YCJ  "Initial release"   2021-08-25  RCSB  
##
