data_P5K
# 
_chem_comp.id                                    P5K 
_chem_comp.name                                  "1-{5-tert-butyl-3-[(1,1-dioxidothiomorpholin-4-yl)carbonyl]thiophen-2-yl}-3-naphthalen-1-ylurea" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H27 N3 O4 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-10-12 
_chem_comp.pdbx_modified_date                    2011-10-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        485.619 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     P5K 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3P5K 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
P5K C1   C1   C 0 1 Y N N 49.269 27.237 -17.006 -2.344 1.533  0.370  C1   P5K 1  
P5K C2   C2   C 0 1 Y N N 50.462 28.060 -16.794 -1.452 0.416  0.592  C2   P5K 2  
P5K C3   C3   C 0 1 Y N N 50.998 28.667 -17.994 -0.137 0.734  0.372  C3   P5K 3  
P5K S4   S4   S 0 1 Y N N 49.807 28.332 -19.292 0.018  2.365  -0.097 S4   P5K 4  
P5K C5   C5   C 0 1 Y N N 48.769 27.188 -18.379 -1.713 2.638  -0.000 C5   P5K 5  
P5K C6   C6   C 0 1 N N N 47.559 26.590 -18.944 -2.390 3.951  -0.298 C6   P5K 6  
P5K C7   C7   C 0 1 N N N 46.752 27.542 -19.810 -3.141 4.432  0.945  C7   P5K 7  
P5K C8   C8   C 0 1 N N N 46.643 26.292 -17.792 -1.337 4.990  -0.692 C8   P5K 8  
P5K C9   C9   C 0 1 N N N 47.883 25.368 -19.781 -3.378 3.765  -1.451 C9   P5K 9  
P5K N10  N10  N 0 1 N N N 52.213 29.371 -18.151 0.922  -0.150 0.513  N10  P5K 10 
P5K C11  C11  C 0 1 N N N 51.324 28.020 -15.534 -1.907 -0.914 1.007  C11  P5K 11 
P5K O12  O12  O 0 1 N N N 51.838 26.961 -15.204 -1.433 -1.437 1.999  O12  P5K 12 
P5K N13  N13  N 0 1 N N N 51.579 29.119 -14.813 -2.850 -1.558 0.291  N13  P5K 13 
P5K C14  C14  C 0 1 N N N 52.319 30.287 -19.113 2.182  0.264  0.272  C14  P5K 14 
P5K N15  N15  N 0 1 N N N 53.454 30.980 -19.206 3.211  -0.595 0.409  N15  P5K 15 
P5K O16  O16  O 0 1 N N N 51.386 30.496 -19.892 2.390  1.413  -0.068 O16  P5K 16 
P5K C17  C17  C 0 1 Y N N 53.731 32.093 -20.035 4.524  -0.138 0.279  C17  P5K 17 
P5K C18  C18  C 0 1 Y N N 52.897 33.283 -20.006 4.826  1.185  0.519  C18  P5K 18 
P5K C19  C19  C 0 1 Y N N 53.246 34.384 -20.892 6.132  1.651  0.392  C19  P5K 19 
P5K C20  C20  C 0 1 Y N N 54.386 34.297 -21.791 7.144  0.816  0.028  C20  P5K 20 
P5K C21  C21  C 0 1 Y N N 55.210 33.098 -21.824 6.878  -0.540 -0.226 C21  P5K 21 
P5K C22  C22  C 0 1 Y N N 54.888 32.002 -20.922 5.554  -1.028 -0.094 C22  P5K 22 
P5K C23  C23  C 0 1 N N N 51.521 30.519 -15.286 -3.385 -2.832 0.776  C23  P5K 23 
P5K C24  C24  C 0 1 N N N 52.248 28.871 -13.505 -3.334 -0.975 -0.961 C24  P5K 24 
P5K C25  C25  C 0 1 Y N N 56.339 33.010 -22.742 7.903  -1.426 -0.602 C25  P5K 25 
P5K C26  C26  C 0 1 Y N N 57.174 31.817 -22.745 7.609  -2.734 -0.840 C26  P5K 26 
P5K C27  C27  C 0 1 Y N N 56.862 30.730 -21.820 6.306  -3.210 -0.715 C27  P5K 27 
P5K C28  C28  C 0 1 Y N N 55.729 30.814 -20.912 5.290  -2.384 -0.342 C28  P5K 28 
P5K C29  C29  C 0 1 N N N 50.831 31.431 -14.293 -4.874 -2.673 1.094  C29  P5K 29 
P5K C30  C30  C 0 1 N N N 51.677 29.674 -12.341 -4.818 -0.624 -0.822 C30  P5K 30 
P5K S31  S31  S 0 1 N N N 51.672 31.445 -12.690 -5.743 -2.125 -0.405 S31  P5K 31 
P5K O32  O32  O 0 1 N N N 50.590 32.383 -11.650 -7.069 -1.755 -0.052 O32  P5K 32 
P5K O33  O33  O 0 1 N N N 53.158 32.236 -13.242 -5.538 -3.091 -1.427 O33  P5K 33 
P5K H1   H1   H 0 1 N N N 48.790 26.701 -16.200 -3.415 1.472  0.489  H1   P5K 34 
P5K H7   H7   H 0 1 N N N 45.863 27.023 -20.196 -2.437 4.565  1.766  H7   P5K 35 
P5K H7A  H7A  H 0 1 N N N 46.438 28.408 -19.209 -3.630 5.381  0.729  H7A  P5K 36 
P5K H7B  H7B  H 0 1 N N N 47.371 27.885 -20.652 -3.891 3.692  1.225  H7B  P5K 37 
P5K H8   H8   H 0 1 N N N 45.714 25.839 -18.169 -0.802 4.648  -1.577 H8   P5K 38 
P5K H8A  H8A  H 0 1 N N N 47.138 25.593 -17.101 -1.827 5.940  -0.907 H8A  P5K 39 
P5K H8B  H8B  H 0 1 N N N 46.406 27.226 -17.261 -0.633 5.123  0.130  H8B  P5K 40 
P5K H9   H9   H 0 1 N N N 46.953 24.945 -20.189 -4.128 3.025  -1.171 H9   P5K 41 
P5K H9A  H9A  H 0 1 N N N 48.548 25.656 -20.608 -3.868 4.715  -1.667 H9A  P5K 42 
P5K H9B  H9B  H 0 1 N N N 48.383 24.616 -19.153 -2.843 3.423  -2.337 H9B  P5K 43 
P5K HN10 HN10 H 0 0 N N N 52.986 29.184 -17.546 0.756  -1.066 0.785  HN10 P5K 44 
P5K HN15 HN15 H 0 0 N N N 54.203 30.676 -18.617 3.040  -1.531 0.598  HN15 P5K 45 
P5K H18  H18  H 0 1 N N N 52.044 33.348 -19.347 4.042  1.868  0.809  H18  P5K 46 
P5K H19  H19  H 0 1 N N N 52.647 35.283 -20.882 6.346  2.692  0.584  H19  P5K 47 
P5K H20  H20  H 0 1 N N N 54.623 35.128 -22.439 8.151  1.196  -0.066 H20  P5K 48 
P5K H23  H23  H 0 1 N N N 52.549 30.880 -15.438 -3.257 -3.595 0.008  H23  P5K 49 
P5K H23A H23A H 0 0 N N N 50.962 30.546 -16.233 -2.850 -3.131 1.678  H23A P5K 50 
P5K H24  H24  H 0 1 N N N 52.135 27.803 -13.266 -2.766 -0.072 -1.184 H24  P5K 51 
P5K H24A H24A H 0 0 N N N 53.309 29.141 -13.613 -3.204 -1.694 -1.770 H24A P5K 52 
P5K H25  H25  H 0 1 N N N 56.555 33.825 -23.416 8.917  -1.070 -0.703 H25  P5K 53 
P5K H26  H26  H 0 1 N N N 58.012 31.737 -23.421 8.399  -3.411 -1.129 H26  P5K 54 
P5K H27  H27  H 0 1 N N N 57.484 29.847 -21.810 6.100  -4.253 -0.909 H27  P5K 55 
P5K H28  H28  H 0 1 N N N 55.513 30.001 -20.235 4.285  -2.767 -0.249 H28  P5K 56 
P5K H29  H29  H 0 1 N N N 50.828 32.454 -14.698 -5.281 -3.629 1.423  H29  P5K 57 
P5K H29A H29A H 0 0 N N N 49.800 31.076 -14.147 -5.002 -1.930 1.882  H29A P5K 58 
P5K H30  H30  H 0 1 N N N 50.643 29.347 -12.160 -4.946 0.116  -0.032 H30  P5K 59 
P5K H30A H30A H 0 0 N N N 52.295 29.491 -11.449 -5.188 -0.221 -1.765 H30A P5K 60 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
P5K C1  C2   SING Y N 1  
P5K C1  C5   DOUB Y N 2  
P5K C2  C3   DOUB Y N 3  
P5K C2  C11  SING N N 4  
P5K C3  S4   SING Y N 5  
P5K C3  N10  SING N N 6  
P5K S4  C5   SING Y N 7  
P5K C5  C6   SING N N 8  
P5K C6  C7   SING N N 9  
P5K C6  C8   SING N N 10 
P5K C6  C9   SING N N 11 
P5K N10 C14  SING N N 12 
P5K C11 O12  DOUB N N 13 
P5K C11 N13  SING N N 14 
P5K N13 C23  SING N N 15 
P5K N13 C24  SING N N 16 
P5K C14 N15  SING N N 17 
P5K C14 O16  DOUB N N 18 
P5K N15 C17  SING N N 19 
P5K C17 C18  DOUB Y N 20 
P5K C17 C22  SING Y N 21 
P5K C18 C19  SING Y N 22 
P5K C19 C20  DOUB Y N 23 
P5K C20 C21  SING Y N 24 
P5K C21 C22  DOUB Y N 25 
P5K C21 C25  SING Y N 26 
P5K C22 C28  SING Y N 27 
P5K C23 C29  SING N N 28 
P5K C24 C30  SING N N 29 
P5K C25 C26  DOUB Y N 30 
P5K C26 C27  SING Y N 31 
P5K C27 C28  DOUB Y N 32 
P5K C29 S31  SING N N 33 
P5K C30 S31  SING N N 34 
P5K S31 O32  DOUB N N 35 
P5K S31 O33  DOUB N N 36 
P5K C1  H1   SING N N 37 
P5K C7  H7   SING N N 38 
P5K C7  H7A  SING N N 39 
P5K C7  H7B  SING N N 40 
P5K C8  H8   SING N N 41 
P5K C8  H8A  SING N N 42 
P5K C8  H8B  SING N N 43 
P5K C9  H9   SING N N 44 
P5K C9  H9A  SING N N 45 
P5K C9  H9B  SING N N 46 
P5K N10 HN10 SING N N 47 
P5K N15 HN15 SING N N 48 
P5K C18 H18  SING N N 49 
P5K C19 H19  SING N N 50 
P5K C20 H20  SING N N 51 
P5K C23 H23  SING N N 52 
P5K C23 H23A SING N N 53 
P5K C24 H24  SING N N 54 
P5K C24 H24A SING N N 55 
P5K C25 H25  SING N N 56 
P5K C26 H26  SING N N 57 
P5K C27 H27  SING N N 58 
P5K C28 H28  SING N N 59 
P5K C29 H29  SING N N 60 
P5K C29 H29A SING N N 61 
P5K C30 H30  SING N N 62 
P5K C30 H30A SING N N 63 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
P5K SMILES           ACDLabs              12.01 "O=C(Nc2sc(cc2C(=O)N1CCS(=O)(=O)CC1)C(C)(C)C)Nc4c3ccccc3ccc4"                                                                                                        
P5K SMILES_CANONICAL CACTVS               3.370 "CC(C)(C)c1sc(NC(=O)Nc2cccc3ccccc23)c(c1)C(=O)N4CC[S](=O)(=O)CC4"                                                                                                    
P5K SMILES           CACTVS               3.370 "CC(C)(C)c1sc(NC(=O)Nc2cccc3ccccc23)c(c1)C(=O)N4CC[S](=O)(=O)CC4"                                                                                                    
P5K SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CC(C)(C)c1cc(c(s1)NC(=O)Nc2cccc3c2cccc3)C(=O)N4CCS(=O)(=O)CC4"                                                                                                      
P5K SMILES           "OpenEye OEToolkits" 1.7.0 "CC(C)(C)c1cc(c(s1)NC(=O)Nc2cccc3c2cccc3)C(=O)N4CCS(=O)(=O)CC4"                                                                                                      
P5K InChI            InChI                1.03  "InChI=1S/C24H27N3O4S2/c1-24(2,3)20-15-18(22(28)27-11-13-33(30,31)14-12-27)21(32-20)26-23(29)25-19-10-6-8-16-7-4-5-9-17(16)19/h4-10,15H,11-14H2,1-3H3,(H2,25,26,29)" 
P5K InChIKey         InChI                1.03  MGCVZCZJPOZRQX-UHFFFAOYSA-N                                                                                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
P5K "SYSTEMATIC NAME" ACDLabs              12.01 "1-{5-tert-butyl-3-[(1,1-dioxidothiomorpholin-4-yl)carbonyl]thiophen-2-yl}-3-naphthalen-1-ylurea" 
P5K "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "1-[5-tert-butyl-3-[(1,1-dioxo-1,4-thiazinan-4-yl)carbonyl]thiophen-2-yl]-3-naphthalen-1-yl-urea" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
P5K "Create component"     2010-10-12 RCSB 
P5K "Modify aromatic_flag" 2011-06-04 RCSB 
P5K "Modify descriptor"    2011-06-04 RCSB 
# 
