data_8EL
# 
_chem_comp.id                                    8EL 
_chem_comp.name                                  "2-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-2H-1,3-thiazol-5-yl]ethyl phosphono hydrogen phosphate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H20 N4 O7 P2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-06-20 
_chem_comp.pdbx_modified_date                    2018-04-20 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        426.322 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     8EL 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5XSA 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
8EL "C4'" C1  C 0 1 Y N N -12.882 33.124 25.982 6.258  0.407  0.116  "C4'" 8EL 1  
8EL "C5'" C2  C 0 1 Y N N -13.012 33.254 27.415 5.251  -0.300 0.777  "C5'" 8EL 2  
8EL "C6'" C3  C 0 1 Y N N -11.845 33.355 28.130 5.248  -1.677 0.683  "C6'" 8EL 3  
8EL "N1'" N1  N 0 1 Y N N -10.626 33.328 27.469 6.193  -2.280 -0.026 "N1'" 8EL 4  
8EL "N3'" N2  N 0 1 Y N N -11.662 33.131 25.360 7.171  -0.269 -0.576 "N3'" 8EL 5  
8EL "C2'" C4  C 0 1 Y N N -10.571 33.184 26.102 7.129  -1.584 -0.638 "C2'" 8EL 6  
8EL CM4   C5  C 0 1 N N N -13.966 35.866 29.538 1.820  -1.164 1.014  CM4   8EL 7  
8EL CM2   C6  C 0 1 N N N -9.263  33.110 25.499 8.183  -2.313 -1.432 CM2   8EL 8  
8EL C7    C7  C 0 1 N N N -15.698 38.912 27.235 -1.325 0.466  0.066  C7    8EL 9  
8EL C6    C8  C 0 1 N N N -15.965 37.974 28.377 -0.188 -0.018 -0.837 C6    8EL 10 
8EL C2    C9  C 0 1 N N N -16.452 34.286 27.219 3.233  2.219  -0.006 C2    8EL 11 
8EL "C7'" C10 C 0 1 N N N -14.280 33.248 28.152 4.195  0.423  1.573  "C7'" 8EL 12 
8EL C4    C11 C 0 1 N N N -14.978 35.607 28.449 2.015  0.190  0.382  C4    8EL 13 
8EL C5    C12 C 0 1 N N N -15.810 36.553 27.954 1.096  0.660  -0.435 C5    8EL 14 
8EL "N4'" N3  N 0 1 N N N -13.946 32.988 25.187 6.302  1.791  0.175  "N4'" 8EL 15 
8EL N3    N4  N 0 1 N N N -15.123 34.410 27.820 3.152  0.913  0.669  N3    8EL 16 
8EL O1B   O1  O 0 1 N N N -20.031 40.827 25.750 -7.077 0.891  -0.555 O1B   8EL 17 
8EL O1A   O2  O 0 1 N N N -15.207 40.947 25.326 -4.236 1.549  0.410  O1A   8EL 18 
8EL O2B   O3  O 0 1 N N N -19.165 41.583 27.883 -7.361 -1.105 0.965  O2B   8EL 19 
8EL O3B   O4  O 0 1 N N N -18.893 43.086 25.973 -7.300 -1.372 -1.650 O3B   8EL 20 
8EL O2A   O5  O 0 1 N N N -16.017 42.595 27.019 -3.863 -0.419 1.945  O2A   8EL 21 
8EL O7    O6  O 0 1 N N N -15.931 40.255 27.682 -2.543 -0.176 -0.315 O7    8EL 22 
8EL O3A   O7  O 0 1 N N N -17.611 40.948 26.017 -5.121 -0.691 -0.347 O3A   8EL 23 
8EL PB    P1  P 0 1 N N N -18.986 41.658 26.284 -6.723 -0.538 -0.400 PB    8EL 24 
8EL PA    P2  P 0 1 N N N -16.108 41.252 26.456 -3.947 0.097  0.423  PA    8EL 25 
8EL S1    S1  S 0 1 N N N -16.842 35.955 26.677 1.674  2.253  -0.969 S1    8EL 26 
8EL H1    H1  H 0 1 N N N -11.876 33.455 29.205 4.485  -2.257 1.181  H1    8EL 27 
8EL H2    H2  H 0 1 N N N -14.052 36.908 29.879 0.835  -1.549 0.752  H2    8EL 28 
8EL H3    H3  H 0 1 N N N -14.155 35.187 30.383 2.586  -1.849 0.650  H3    8EL 29 
8EL H4    H4  H 0 1 N N N -12.953 35.691 29.146 1.899  -1.074 2.097  H4    8EL 30 
8EL H5    H5  H 0 1 N N N -9.367  33.011 24.408 9.028  -2.548 -0.785 H5    8EL 31 
8EL H6    H6  H 0 1 N N N -8.700  34.026 25.732 7.763  -3.237 -1.831 H6    8EL 32 
8EL H7    H7  H 0 1 N N N -8.725  32.237 25.897 8.519  -1.683 -2.255 H7    8EL 33 
8EL H8    H8  H 0 1 N N N -16.372 38.678 26.398 -1.094 0.222  1.103  H8    8EL 34 
8EL H9    H9  H 0 1 N N N -14.654 38.807 26.906 -1.436 1.546  -0.037 H9    8EL 35 
8EL H10   H10 H 0 1 N N N -15.254 38.186 29.189 -0.077 -1.098 -0.734 H10   8EL 36 
8EL H11   H11 H 0 1 N N N -16.992 38.131 28.738 -0.419 0.226  -1.874 H11   8EL 37 
8EL H12   H12 H 0 1 N N N -17.185 33.934 27.960 3.257  3.031  0.720  H12   8EL 38 
8EL H13   H13 H 0 1 N N N -16.432 33.592 26.365 4.100  2.263  -0.665 H13   8EL 39 
8EL H14   H14 H 0 1 N N N -14.830 32.329 27.903 3.756  -0.262 2.299  H14   8EL 40 
8EL H15   H15 H 0 1 N N N -14.063 33.264 29.230 4.648  1.265  2.096  H15   8EL 41 
8EL H16   H16 H 0 1 N N N -13.645 32.912 24.236 5.693  2.271  0.758  H16   8EL 42 
8EL H17   H17 H 0 1 N N N -14.450 32.163 25.443 6.942  2.279  -0.366 H17   8EL 43 
8EL H18   H18 H 0 1 N N N -19.901 41.021 28.094 -7.169 -2.037 1.131  H18   8EL 44 
8EL H19   H19 H 0 1 N N N -19.605 43.332 25.394 -8.262 -1.326 -1.744 H19   8EL 45 
8EL H20   H20 H 0 1 N N N -15.359 43.092 26.548 -3.675 -1.364 2.030  H20   8EL 46 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8EL "N4'" "C4'" SING N N 1  
8EL O1A   PA    DOUB N N 2  
8EL "N3'" "C4'" DOUB Y N 3  
8EL "N3'" "C2'" SING Y N 4  
8EL CM2   "C2'" SING N N 5  
8EL O1B   PB    DOUB N N 6  
8EL O3B   PB    SING N N 7  
8EL "C4'" "C5'" SING Y N 8  
8EL O3A   PB    SING N N 9  
8EL O3A   PA    SING N N 10 
8EL "C2'" "N1'" DOUB Y N 11 
8EL PB    O2B   SING N N 12 
8EL PA    O2A   SING N N 13 
8EL PA    O7    SING N N 14 
8EL S1    C2    SING N N 15 
8EL S1    C5    SING N N 16 
8EL C2    N3    SING N N 17 
8EL C7    O7    SING N N 18 
8EL C7    C6    SING N N 19 
8EL "C5'" "C6'" DOUB Y N 20 
8EL "C5'" "C7'" SING N N 21 
8EL "N1'" "C6'" SING Y N 22 
8EL N3    "C7'" SING N N 23 
8EL N3    C4    SING N N 24 
8EL C5    C6    SING N N 25 
8EL C5    C4    DOUB N N 26 
8EL C4    CM4   SING N N 27 
8EL "C6'" H1    SING N N 28 
8EL CM4   H2    SING N N 29 
8EL CM4   H3    SING N N 30 
8EL CM4   H4    SING N N 31 
8EL CM2   H5    SING N N 32 
8EL CM2   H6    SING N N 33 
8EL CM2   H7    SING N N 34 
8EL C7    H8    SING N N 35 
8EL C7    H9    SING N N 36 
8EL C6    H10   SING N N 37 
8EL C6    H11   SING N N 38 
8EL C2    H12   SING N N 39 
8EL C2    H13   SING N N 40 
8EL "C7'" H14   SING N N 41 
8EL "C7'" H15   SING N N 42 
8EL "N4'" H16   SING N N 43 
8EL "N4'" H17   SING N N 44 
8EL O2B   H18   SING N N 45 
8EL O3B   H19   SING N N 46 
8EL O2A   H20   SING N N 47 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
8EL InChI            InChI                1.03  "InChI=1S/C12H20N4O7P2S/c1-8-11(3-4-22-25(20,21)23-24(17,18)19)26-7-16(8)6-10-5-14-9(2)15-12(10)13/h5H,3-4,6-7H2,1-2H3,(H,20,21)(H2,13,14,15)(H2,17,18,19)" 
8EL InChIKey         InChI                1.03  FCUXBJDJFWOWMD-UHFFFAOYSA-N                                                                                                                                 
8EL SMILES_CANONICAL CACTVS               3.385 "Cc1ncc(CN2CSC(=C2C)CCO[P](O)(=O)O[P](O)(O)=O)c(N)n1"                                                                                                       
8EL SMILES           CACTVS               3.385 "Cc1ncc(CN2CSC(=C2C)CCO[P](O)(=O)O[P](O)(O)=O)c(N)n1"                                                                                                       
8EL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1ncc(c(n1)N)CN2CSC(=C2C)CCOP(=O)(O)OP(=O)(O)O"                                                                                                           
8EL SMILES           "OpenEye OEToolkits" 2.0.6 "Cc1ncc(c(n1)N)CN2CSC(=C2C)CCOP(=O)(O)OP(=O)(O)O"                                                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
8EL "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "2-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-2~{H}-1,3-thiazol-5-yl]ethyl phosphono hydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
8EL "Create component" 2017-06-20 PDBJ 
8EL "Initial release"  2018-04-25 RCSB 
# 
