data_M1L
# 
_chem_comp.id                                    M1L 
_chem_comp.name                                  "2-({[(3E)-5-{4-[(DIMETHYLAMINO)(DIHYDROXY)-LAMBDA~4~-SULFANYL]PHENYL}-8-METHYL-2-OXO-6,7,8,9-TETRAHYDRO-1H-PYRROLO[3,2-H]ISOQUINOLIN-3(2H)-YLIDENE]AMINO}OXY)-4-HYDROXYBUTANOIC ACID" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H30 N4 O7 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "SPD 502; NS 1209" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2003-08-05 
_chem_comp.pdbx_modified_date                    2020-05-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        518.583 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     M1L 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2CMO 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
M1L C1   C1   C 0 1 N N N 3.838  30.640 25.687 0.323  3.675  0.125  C1   M1L 1  
M1L C2   C2   C 0 1 Y N N 5.685  28.942 22.655 -1.384 0.301  0.005  C2   M1L 2  
M1L C3   C3   C 0 1 Y N N 6.179  30.082 21.999 -2.721 0.665  -0.053 C3   M1L 3  
M1L C4   C4   C 0 1 Y N N 5.946  31.383 22.508 -3.089 2.016  -0.051 C4   M1L 4  
M1L C5   C5   C 0 1 Y N N 5.194  31.601 23.691 -2.100 3.000  0.011  C5   M1L 5  
M1L C6   C6   C 0 1 Y N N 4.666  30.437 24.390 -0.774 2.641  0.065  C6   M1L 6  
M1L C7   C7   C 0 1 Y N N 4.918  29.089 23.856 -0.408 1.290  0.064  C7   M1L 7  
M1L C8   C8   C 0 1 N N N 3.504  32.104 26.048 -0.257 5.028  0.537  C8   M1L 8  
M1L N1   N1   N 0 1 N N N 4.656  33.014 25.695 -1.414 5.321  -0.323 N1   M1L 9  
M1L C10  C10  C 0 1 N N N 4.944  32.992 24.218 -2.536 4.442  0.021  C10  M1L 10 
M1L N2   N2   N 0 1 N N N 6.535  32.345 21.687 -4.475 2.119  -0.115 N2   M1L 11 
M1L C11  C11  C 0 1 N N N 7.181  31.766 20.618 -5.058 0.909  -0.160 C11  M1L 12 
M1L O1   O1   O 0 1 N N N 7.790  32.309 19.721 -6.253 0.691  -0.220 O1   M1L 13 
M1L C12  C12  C 0 1 N N N 6.982  30.247 20.771 -3.982 -0.114 -0.124 C12  M1L 14 
M1L N3   N3   N 0 1 N N N 7.486  29.420 19.884 -4.115 -1.409 -0.149 N3   M1L 15 
M1L C13  C13  C 0 1 N N N 4.401  34.411 26.152 -1.802 6.734  -0.221 C13  M1L 16 
M1L C14  C14  C 0 1 Y N N 4.537  26.101 26.245 2.795  -0.376 1.113  C14  M1L 17 
M1L C15  C15  C 0 1 Y N N 5.048  27.288 25.651 1.460  -0.028 1.059  C15  M1L 18 
M1L C16  C16  C 0 1 Y N N 4.412  27.853 24.493 1.025  0.912  0.126  C16  M1L 19 
M1L C17  C17  C 0 1 Y N N 3.258  27.197 23.950 1.941  1.494  -0.748 C17  M1L 20 
M1L C18  C18  C 0 1 Y N N 2.748  26.014 24.539 3.273  1.138  -0.686 C18  M1L 21 
M1L C19  C19  C 0 1 Y N N 3.386  25.469 25.684 3.699  0.205  0.242  C19  M1L 22 
M1L S1   S1   S 0 1 N N N 2.737  23.989 26.422 5.448  -0.257 0.319  S1   M1L 23 
M1L N4   N4   N 0 1 N N N 3.486  22.778 25.521 7.138  -0.703 0.392  N4   M1L 24 
M1L O2   O2   O 0 1 N N N 1.305  23.950 26.163 5.779  0.791  -0.926 O2   M1L 25 
M1L O3   O3   O 0 1 N N N 3.204  23.926 27.797 5.046  -1.834 -0.009 O3   M1L 26 
M1L C20  C20  C 0 1 N N N 2.776  22.055 24.461 7.374  -1.702 1.443  C20  M1L 27 
M1L C21  C21  C 0 1 N N N 4.880  22.384 25.747 7.612  -1.187 -0.911 C21  M1L 28 
M1L O4   O4   O 0 1 N N N 7.214  28.064 20.149 -2.969 -2.240 -0.106 O4   M1L 29 
M1L C22  C22  C 0 1 N N S 7.800  27.224 19.128 -3.263 -3.638 -0.141 C22  M1L 30 
M1L C23  C23  C 0 1 N N N 7.920  25.786 19.674 -2.062 -4.398 -0.705 C23  M1L 31 
M1L C24  C24  C 0 1 N N N 8.775  25.681 20.940 -1.843 -3.995 -2.165 C24  M1L 32 
M1L O5   O5   O 0 1 N N N 10.019 26.362 20.775 -0.720 -4.705 -2.692 O5   M1L 33 
M1L C25  C25  C 0 1 N N N 6.913  27.215 17.858 -3.555 -4.124 1.256  C25  M1L 34 
M1L O6   O6   O 0 1 N N N 7.504  27.382 16.750 -3.859 -5.414 1.467  O6   M1L 35 
M1L O7   O7   O 0 1 N N N 5.662  27.049 17.991 -3.514 -3.353 2.185  O7   M1L 36 
M1L H11  1H1  H 0 1 N N N 2.872  30.144 25.511 1.072  3.365  0.854  H11  M1L 37 
M1L H12  2H1  H 0 1 N N N 4.422  30.220 26.520 0.790  3.765  -0.856 H12  M1L 38 
M1L H2   H2   H 0 1 N N N 5.883  27.958 22.255 -1.103 -0.742 0.006  H2   M1L 39 
M1L H81  1H8  H 0 1 N N N 3.318  32.170 27.130 -0.575 4.989  1.579  H81  M1L 40 
M1L H82  2H8  H 0 1 N N N 2.612  32.419 25.487 0.498  5.804  0.411  H82  M1L 41 
M1L H101 1H10 H 0 0 N N N 4.059  33.390 23.700 -3.338 4.580  -0.705 H101 M1L 42 
M1L H102 2H10 H 0 0 N N N 5.841  33.600 24.031 -2.903 4.700  1.014  H102 M1L 43 
M1L HN2  HN2  H 0 1 N N N 6.493  33.330 21.854 -4.959 2.959  -0.126 HN2  M1L 44 
M1L H131 1H13 H 0 0 N N N 3.453  34.769 25.724 -0.947 7.364  -0.464 H131 M1L 45 
M1L H132 2H13 H 0 0 N N N 5.223  35.061 25.819 -2.615 6.939  -0.918 H132 M1L 46 
M1L H133 3H13 H 0 0 N N N 4.338  34.432 27.250 -2.134 6.947  0.796  H133 M1L 47 
M1L H14  H14  H 0 1 N N N 5.017  25.680 27.116 3.134  -1.101 1.838  H14  M1L 48 
M1L H15  H15  H 0 1 N N N 5.919  27.767 26.073 0.755  -0.482 1.739  H15  M1L 49 
M1L H17  H17  H 0 1 N N N 2.771  27.611 23.080 1.609  2.222  -1.473 H17  M1L 50 
M1L H18  H18  H 0 1 N N N 1.879  25.529 24.119 3.983  1.588  -1.363 H18  M1L 51 
M1L HO2  HO2  H 0 1 N N N 0.834  23.942 26.988 6.002  1.686  -0.638 HO2  M1L 52 
M1L HO3  HO3  H 0 1 N N N 4.154  23.912 27.809 4.871  -2.366 0.779  HO3  M1L 53 
M1L H201 1H20 H 0 0 N N N 1.813  21.691 24.848 6.785  -2.595 1.233  H201 M1L 54 
M1L H202 2H20 H 0 0 N N N 3.384  21.201 24.129 8.432  -1.962 1.467  H202 M1L 55 
M1L H203 3H20 H 0 0 N N N 2.598  22.731 23.611 7.078  -1.291 2.408  H203 M1L 56 
M1L H211 1H21 H 0 0 N N N 4.907  21.420 26.277 7.490  -0.402 -1.657 H211 M1L 57 
M1L H212 2H21 H 0 0 N N N 5.384  23.151 26.354 8.666  -1.457 -0.837 H212 M1L 58 
M1L H213 3H21 H 0 0 N N N 5.395  22.285 24.780 7.032  -2.062 -1.206 H213 M1L 59 
M1L H22  H22  H 0 1 N N N 8.792  27.618 18.863 -4.133 -3.811 -0.774 H22  M1L 60 
M1L H231 1H23 H 0 0 N N N 8.414  25.183 18.897 -1.172 -4.155 -0.124 H231 M1L 61 
M1L H232 2H23 H 0 0 N N N 6.909  25.425 19.913 -2.251 -5.470 -0.649 H232 M1L 62 
M1L H241 1H24 H 0 0 N N N 8.980  24.619 21.139 -2.732 -4.238 -2.746 H241 M1L 63 
M1L H242 2H24 H 0 0 N N N 8.228  26.134 21.780 -1.654 -2.923 -2.221 H242 M1L 64 
M1L HO5  HO5  H 0 1 N N N 10.178 26.513 19.851 -0.523 -4.498 -3.616 HO5  M1L 65 
M1L HO6  HO6  H 0 1 N N N 6.867  27.363 16.045 -4.037 -5.679 2.380  HO6  M1L 66 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
M1L C1  C6   SING N N 1  
M1L C1  C8   SING N N 2  
M1L C1  H11  SING N N 3  
M1L C1  H12  SING N N 4  
M1L C2  C3   DOUB Y N 5  
M1L C2  C7   SING Y N 6  
M1L C2  H2   SING N N 7  
M1L C3  C4   SING Y N 8  
M1L C3  C12  SING N N 9  
M1L C4  C5   DOUB Y N 10 
M1L C4  N2   SING N N 11 
M1L C5  C6   SING Y N 12 
M1L C5  C10  SING N N 13 
M1L C6  C7   DOUB Y N 14 
M1L C7  C16  SING Y N 15 
M1L C8  N1   SING N N 16 
M1L C8  H81  SING N N 17 
M1L C8  H82  SING N N 18 
M1L N1  C10  SING N N 19 
M1L N1  C13  SING N N 20 
M1L C10 H101 SING N N 21 
M1L C10 H102 SING N N 22 
M1L N2  C11  SING N N 23 
M1L N2  HN2  SING N N 24 
M1L C11 O1   DOUB N N 25 
M1L C11 C12  SING N N 26 
M1L C12 N3   DOUB N E 27 
M1L N3  O4   SING N N 28 
M1L C13 H131 SING N N 29 
M1L C13 H132 SING N N 30 
M1L C13 H133 SING N N 31 
M1L C14 C15  SING Y N 32 
M1L C14 C19  DOUB Y N 33 
M1L C14 H14  SING N N 34 
M1L C15 C16  DOUB Y N 35 
M1L C15 H15  SING N N 36 
M1L C16 C17  SING Y N 37 
M1L C17 C18  DOUB Y N 38 
M1L C17 H17  SING N N 39 
M1L C18 C19  SING Y N 40 
M1L C18 H18  SING N N 41 
M1L C19 S1   SING N N 42 
M1L S1  N4   SING N N 43 
M1L S1  O2   SING N N 44 
M1L S1  O3   SING N N 45 
M1L N4  C20  SING N N 46 
M1L N4  C21  SING N N 47 
M1L O2  HO2  SING N N 48 
M1L O3  HO3  SING N N 49 
M1L C20 H201 SING N N 50 
M1L C20 H202 SING N N 51 
M1L C20 H203 SING N N 52 
M1L C21 H211 SING N N 53 
M1L C21 H212 SING N N 54 
M1L C21 H213 SING N N 55 
M1L O4  C22  SING N N 56 
M1L C22 C23  SING N N 57 
M1L C22 C25  SING N N 58 
M1L C22 H22  SING N N 59 
M1L C23 C24  SING N N 60 
M1L C23 H231 SING N N 61 
M1L C23 H232 SING N N 62 
M1L C24 O5   SING N N 63 
M1L C24 H241 SING N N 64 
M1L C24 H242 SING N N 65 
M1L O5  HO5  SING N N 66 
M1L C25 O6   SING N N 67 
M1L C25 O7   DOUB N N 68 
M1L O6  HO6  SING N N 69 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
M1L SMILES           ACDLabs              10.04 "O=C(O)C(O\N=C2/c1cc(c3c(c1NC2=O)CN(CC3)C)c4ccc(cc4)S(O)(O)N(C)C)CCO"                                                                                                                                        
M1L InChI            InChI                1.03  "InChI=1S/C24H30N4O7S/c1-27(2)36(33,34)15-6-4-14(5-7-15)17-12-18-21(19-13-28(3)10-8-16(17)19)25-23(30)22(18)26-35-20(9-11-29)24(31)32/h4-7,12,20,29,33-34H,8-11,13H2,1-3H3,(H,31,32)(H,25,26,30)/t20-/m0/s1" 
M1L InChIKey         InChI                1.03  PHWIDOUZQOKACD-FQEVSTJZSA-N                                                                                                                                                                                  
M1L SMILES_CANONICAL CACTVS               3.385 "CN1CCc2c(C1)c3NC(=O)C(=N/O[C@@H](CCO)C(O)=O)/c3cc2c4ccc(cc4)[S](O)(O)N(C)C"                                                                                                                                 
M1L SMILES           CACTVS               3.385 "CN1CCc2c(C1)c3NC(=O)C(=NO[CH](CCO)C(O)=O)c3cc2c4ccc(cc4)[S](O)(O)N(C)C"                                                                                                                                     
M1L SMILES_CANONICAL "OpenEye OEToolkits" 1.7.5 "CN1CCc2c(cc\3c(c2C1)NC(=O)/C3=N/O[C@@H](CCO)C(=O)O)c4ccc(cc4)S(N(C)C)(O)O"                                                                                                                                  
M1L SMILES           "OpenEye OEToolkits" 1.7.5 "CN1CCc2c(cc3c(c2C1)NC(=O)C3=NOC(CCO)C(=O)O)c4ccc(cc4)S(N(C)C)(O)O"                                                                                                                                          
# 
_pdbx_chem_comp_identifier.comp_id           M1L 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           ACDLabs 
_pdbx_chem_comp_identifier.program_version   10.04 
_pdbx_chem_comp_identifier.identifier        "(2S)-2-({[(3E)-5-{4-[(dimethylamino)(dihydroxy)-lambda~4~-sulfanyl]phenyl}-8-methyl-2-oxo-1,2,6,7,8,9-hexahydro-3H-pyrrolo[3,2-h]isoquinolin-3-ylidene]amino}oxy)-4-hydroxybutanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
M1L "Create component"     2003-08-05 RCSB 
M1L "Modify aromatic_flag" 2011-06-04 RCSB 
M1L "Modify descriptor"    2011-06-04 RCSB 
M1L "Modify descriptor"    2012-01-05 RCSB 
M1L "Modify coordinates"   2012-01-05 RCSB 
M1L "Modify synonyms"      2020-05-27 PDBE 
# 
loop_
_pdbx_chem_comp_synonyms.ordinal 
_pdbx_chem_comp_synonyms.comp_id 
_pdbx_chem_comp_synonyms.name 
_pdbx_chem_comp_synonyms.provenance 
_pdbx_chem_comp_synonyms.type 
1 M1L "SPD 502" ? ? 
2 M1L "NS 1209" ? ? 
# 
