data_MYL
#

_chem_comp.id                                   MYL
_chem_comp.name                                 "Mycalamide A"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAD
_chem_comp.formula                              "C24 H41 N O10"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "(2S)-N-{(4R,4aS,6R,8S,8aR)-6-[(2S)-2,3-dihydroxypropyl]-8-methoxy-7,7-dimethylhexahydropyrano[3,2-d][1,3]dioxin-4-yl}-2-hydroxy-2-[(2R,5R,6R)-2-methoxy-5,6-dimethyl-4-methylidenetetrahydro-2H-pyran-2-yl]ethanamide"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2009-08-21
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       503.583
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    MYL
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3I55
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
MYL  CAA   CAA   C  0  1  N  N  N  83.703  79.568  67.026  -6.141   1.636  -0.423  CAA   MYL   1  
MYL  CAB   CAB   C  0  1  N  N  N  80.851  81.492  64.885  -3.955  -2.843  -0.588  CAB   MYL   2  
MYL  CAC   CAC   C  0  1  N  N  N  84.493  83.690  66.471  -2.345   0.186  -3.092  CAC   MYL   3  
MYL  CAD   CAD   C  0  1  N  N  N  83.367  82.115  68.570  -2.997   2.466  -1.490  CAD   MYL   4  
MYL  CAE   CAE   C  0  1  N  N  N  88.908  84.293  58.994   3.384   2.172  -1.925  CAE   MYL   5  
MYL  CAF   CAF   C  0  1  N  N  N  87.010  83.190  57.762   5.218   0.479  -1.789  CAF   MYL   6  
MYL  CAG   CAG   C  0  1  N  N  N  89.883  80.402  59.146   5.488   0.502   2.096  CAG   MYL   7  
MYL  OAG   OAG   O  0  1  N  N  N  84.628  84.444  63.715  -1.646   0.352   2.902  OAG   MYL   8  
MYL  OAH   OAH   O  0  1  N  N  N  86.086  88.083  60.589   2.211  -4.993  -0.524  OAH   MYL   9  
MYL  OAI   OAI   O  0  1  N  N  N  84.007  85.074  60.657   1.182  -2.330  -0.195  OAI   MYL  10  
MYL  OAJ   OAJ   O  0  1  N  N  N  84.135  81.223  62.243  -3.555  -1.410   2.639  OAJ   MYL  11  
MYL  OAK   OAK   O  0  1  N  N  N  89.091  81.466  58.611   4.651   0.163   0.988  OAK   MYL  12  
MYL  CAL   CAL   C  0  1  N  N  N  84.909  87.293  60.405   3.039  -3.876  -0.194  CAL   MYL  13  
MYL  CAM   CAM   C  0  1  N  N  N  88.234  80.259  61.720   0.987   3.272   0.795  CAM   MYL  14  
MYL  CAN   CAN   C  0  1  N  N  N  84.044  81.101  65.027  -4.244   0.618   0.775  CAN   MYL  15  
MYL  CAO   CAO   C  0  1  N  N  N  86.220  85.279  59.691   3.395  -1.429  -0.557  CAO   MYL  16  
MYL  NAP   NAP   N  0  1  N  N  N  86.101  82.969  62.904  -0.607  -0.029   0.980  NAP   MYL  17  
MYL  OAQ   OAQ   O  0  1  N  N  N  81.892  81.202  63.948  -4.513  -1.641  -0.054  OAQ   MYL  18  
MYL  OAR   OAR   O  0  1  N  N  N  87.913  81.604  62.109   0.039   2.218   0.615  OAR   MYL  19  
MYL  OAS   OAS   O  0  1  N  N  N  87.506  79.887  60.539   2.263   2.858   0.299  OAS   MYL  20  
MYL  OAT   OAT   O  0  1  N  N  N  82.646  83.139  64.966  -2.678  -0.387  -0.767  OAT   MYL  21  
MYL  OAU   OAU   O  0  1  N  N  N  85.613  82.997  60.289   1.646   0.235  -0.654  OAU   MYL  22  
MYL  CAV   CAV   C  0  1  N  N  N  83.517  80.811  66.439  -4.894   1.236  -0.446  CAV   MYL  23  
MYL  CAW   CAW   C  0  1  N  N  N  84.874  83.348  63.223  -1.617  -0.243   1.846  CAW   MYL  24  
MYL  CAX   CAX   C  0  1  N  N  S  85.220  85.827  60.714   2.445  -2.604  -0.803  CAX   MYL  25  
MYL  CAY   CAY   C  0  1  N  N  R  83.040  83.228  66.346  -3.356   0.030  -1.954  CAY   MYL  26  
MYL  CAZ   CAZ   C  0  1  N  N  R  82.800  81.950  67.157  -4.048   1.374  -1.696  CAZ   MYL  27  
MYL  CBA   CBA   C  0  1  N  N  R  86.719  83.903  60.143   2.863  -0.185  -1.272  CBA   MYL  28  
MYL  CBB   CBB   C  0  1  N  N  S  83.698  82.396  62.919  -2.711  -1.221   1.502  CBB   MYL  29  
MYL  CBC   CBC   C  0  1  N  N  R  86.488  81.712  62.213   0.400   0.996   1.267  CBC   MYL  30  
MYL  CBD   CBD   C  0  1  N  N  S  88.208  81.995  59.611   4.110   1.294   0.301  CBD   MYL  31  
MYL  CBE   CBE   C  0  1  N  N  N  87.710  83.352  59.115   3.896   0.941  -1.174  CBE   MYL  32  
MYL  CBF   CBF   C  0  1  N  N  R  87.032  81.060  59.859   2.770   1.679   0.928  CBF   MYL  33  
MYL  CBG   CBG   C  0  1  N  N  S  85.995  81.697  60.773   1.765   0.539   0.738  CBG   MYL  34  
MYL  CBH   CBH   C  0  1  N  N  R  83.062  81.970  64.247  -3.538  -0.672   0.338  CBH   MYL  35  
MYL  HAA   HAA   H  0  1  N  N  N  83.335  79.382  68.024  -6.726   1.527   0.479  HAA   MYL  36  
MYL  HAAA  HAAA  H  0  0  N  N  N  84.216  78.787  66.485  -6.583   2.078  -1.303  HAAA  MYL  37  
MYL  HAB   HAB   H  0  1  N  N  N  79.960  80.894  64.641  -4.758  -3.537  -0.835  HAB   MYL  38  
MYL  HABA  HABA  H  0  0  N  N  N  81.192  81.243  65.901  -3.385  -2.611  -1.487  HABA  MYL  39  
MYL  HABB  HABB  H  0  0  N  N  N  80.600  82.562  64.834  -3.296  -3.298   0.152  HABB  MYL  40  
MYL  HAC   HAC   H  0  1  N  N  N  84.769  83.750  67.534  -1.851  -0.769  -3.272  HAC   MYL  41  
MYL  HACA  HACA  H  0  0  N  N  N  85.151  82.971  65.961  -2.863   0.504  -3.997  HACA  MYL  42  
MYL  HACB  HACB  H  0  0  N  N  N  84.604  84.681  66.007  -1.602   0.934  -2.817  HACB  MYL  43  
MYL  HAD   HAD   H  0  1  N  N  N  82.845  82.938  69.081  -2.356   2.200  -0.649  HAD   MYL  44  
MYL  HADA  HADA  H  0  0  N  N  N  83.222  81.182  69.134  -2.391   2.562  -2.391  HADA  MYL  45  
MYL  HADB  HADB  H  0  0  N  N  N  84.441  82.344  68.509  -3.493   3.414  -1.283  HADB  MYL  46  
MYL  HAE   HAE   H  0  1  N  N  N  89.395  84.395  59.975   3.386   1.970  -2.996  HAE   MYL  47  
MYL  HAEA  HAEA  H  0  0  N  N  N  89.626  83.881  58.269   2.368   2.399  -1.600  HAEA  MYL  48  
MYL  HAEB  HAEB  H  0  0  N  N  N  88.565  85.280  58.650   4.032   3.022  -1.714  HAEB  MYL  49  
MYL  HAF   HAF   H  0  1  N  N  N  86.152  82.510  57.871   5.953   1.280  -1.716  HAF   MYL  50  
MYL  HAFA  HAFA  H  0  0  N  N  N  86.657  84.171  57.412   5.581  -0.398  -1.253  HAFA  MYL  51  
MYL  HAFB  HAFB  H  0  0  N  N  N  87.718  82.772  57.031   5.061   0.224  -2.838  HAFB  MYL  52  
MYL  HAG   HAG   H  0  1  N  N  N  90.551  80.012  58.364   5.859  -0.410   2.564  HAG   MYL  53  
MYL  HAGA  HAGA  H  0  0  N  N  N  90.484  80.779  59.987   6.330   1.099   1.746  HAGA  MYL  54  
MYL  HAGB  HAGB  H  0  0  N  N  N  89.223  79.596  59.499   4.914   1.076   2.823  HAGB  MYL  55  
MYL  HOAH  HOAH  H  0  0  N  N  N  85.891  88.993  60.397   2.528  -5.835  -0.170  HOAH  MYL  56  
MYL  HOAI  HOAI  H  0  0  N  N  N  84.191  84.162  60.848   1.227  -2.195   0.762  HOAI  MYL  57  
MYL  HOAJ  HOAJ  H  0  0  N  N  N  83.390  80.660  62.071  -3.983  -0.601   2.950  HOAJ  MYL  58  
MYL  HAL   HAL   H  0  1  N  N  N  84.119  87.650  61.083   3.092  -3.770   0.889  HAL   MYL  59  
MYL  HALA  HALA  H  0  0  N  N  N  84.568  87.383  59.363   4.041  -4.036  -0.593  HALA  MYL  60  
MYL  HAM   HAM   H  0  1  N  N  N  87.967  79.574  62.538   0.655   4.156   0.252  HAM   MYL  61  
MYL  HAMA  HAMA  H  0  0  N  N  N  89.312  80.192  61.514   1.070   3.508   1.856  HAMA  MYL  62  
MYL  HAN   HAN   H  0  1  N  N  N  84.181  80.149  64.494  -3.517   1.311   1.196  HAN   MYL  63  
MYL  HANA  HANA  H  0  0  N  N  N  85.006  81.629  65.105  -5.006   0.386   1.520  HANA  MYL  64  
MYL  HAO   HAO   H  0  1  N  N  N  87.073  85.968  59.609   3.461  -1.234   0.513  HAO   MYL  65  
MYL  HAOA  HAOA  H  0  0  N  N  N  85.727  85.185  58.712   4.384  -1.675  -0.943  HAOA  MYL  66  
MYL  HNAP  HNAP  H  0  0  N  N  N  86.843  83.592  63.153  -0.546  -0.555   0.167  HNAP  MYL  67  
MYL  HAX   HAX   H  0  1  N  N  N  85.661  85.746  61.718   2.310  -2.743  -1.875  HAX   MYL  68  
MYL  HAY   HAY   H  0  1  N  N  N  82.378  83.985  66.791  -4.101  -0.717  -2.228  HAY   MYL  69  
MYL  HAZ   HAZ   H  0  1  N  N  N  81.724  81.739  67.240  -4.684   1.629  -2.544  HAZ   MYL  70  
MYL  HBA   HBA   H  0  1  N  N  N  87.222  84.007  61.116   2.677  -0.419  -2.320  HBA   MYL  71  
MYL  HBB   HBB   H  0  1  N  N  N  82.982  82.928  62.275  -2.268  -2.174   1.215  HBB   MYL  72  
MYL  HBC   HBC   H  0  1  N  N  N  86.048  80.897  62.806   0.459   1.159   2.343  HBC   MYL  73  
MYL  HBD   HBD   H  0  1  N  N  N  88.745  82.100  60.565   4.803   2.132   0.379  HBD   MYL  74  
MYL  HBF   HBF   H  0  1  N  N  N  86.581  80.829  58.883   2.908   1.867   1.993  HBF   MYL  75  
MYL  HBG   HBG   H  0  1  N  N  N  85.081  81.085  60.762   2.105  -0.345   1.278  HBG   MYL  76  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
MYL  CAV  CAA   DOUB  N  N   1  
MYL  CAA  HAA   SING  N  N   2  
MYL  CAA  HAAA  SING  N  N   3  
MYL  OAQ  CAB   SING  N  N   4  
MYL  CAB  HAB   SING  N  N   5  
MYL  CAB  HABA  SING  N  N   6  
MYL  CAB  HABB  SING  N  N   7  
MYL  CAY  CAC   SING  N  N   8  
MYL  CAC  HAC   SING  N  N   9  
MYL  CAC  HACA  SING  N  N  10  
MYL  CAC  HACB  SING  N  N  11  
MYL  CAZ  CAD   SING  N  N  12  
MYL  CAD  HAD   SING  N  N  13  
MYL  CAD  HADA  SING  N  N  14  
MYL  CAD  HADB  SING  N  N  15  
MYL  CAE  CBE   SING  N  N  16  
MYL  CAE  HAE   SING  N  N  17  
MYL  CAE  HAEA  SING  N  N  18  
MYL  CAE  HAEB  SING  N  N  19  
MYL  CAF  CBE   SING  N  N  20  
MYL  CAF  HAF   SING  N  N  21  
MYL  CAF  HAFA  SING  N  N  22  
MYL  CAF  HAFB  SING  N  N  23  
MYL  OAK  CAG   SING  N  N  24  
MYL  CAG  HAG   SING  N  N  25  
MYL  CAG  HAGA  SING  N  N  26  
MYL  CAG  HAGB  SING  N  N  27  
MYL  CAW  OAG   DOUB  N  N  28  
MYL  CAL  OAH   SING  N  N  29  
MYL  OAH  HOAH  SING  N  N  30  
MYL  OAI  CAX   SING  N  N  31  
MYL  OAI  HOAI  SING  N  N  32  
MYL  OAJ  CBB   SING  N  N  33  
MYL  OAJ  HOAJ  SING  N  N  34  
MYL  OAK  CBD   SING  N  N  35  
MYL  CAL  CAX   SING  N  N  36  
MYL  CAL  HAL   SING  N  N  37  
MYL  CAL  HALA  SING  N  N  38  
MYL  OAS  CAM   SING  N  N  39  
MYL  CAM  OAR   SING  N  N  40  
MYL  CAM  HAM   SING  N  N  41  
MYL  CAM  HAMA  SING  N  N  42  
MYL  CBH  CAN   SING  N  N  43  
MYL  CAN  CAV   SING  N  N  44  
MYL  CAN  HAN   SING  N  N  45  
MYL  CAN  HANA  SING  N  N  46  
MYL  CAO  CBA   SING  N  N  47  
MYL  CAO  CAX   SING  N  N  48  
MYL  CAO  HAO   SING  N  N  49  
MYL  CAO  HAOA  SING  N  N  50  
MYL  CBC  NAP   SING  N  N  51  
MYL  NAP  CAW   SING  N  N  52  
MYL  NAP  HNAP  SING  N  N  53  
MYL  OAQ  CBH   SING  N  N  54  
MYL  OAR  CBC   SING  N  N  55  
MYL  CBF  OAS   SING  N  N  56  
MYL  CBH  OAT   SING  N  N  57  
MYL  OAT  CAY   SING  N  N  58  
MYL  CBA  OAU   SING  N  N  59  
MYL  OAU  CBG   SING  N  N  60  
MYL  CAV  CAZ   SING  N  N  61  
MYL  CBB  CAW   SING  N  N  62  
MYL  CAX  HAX   SING  N  N  63  
MYL  CAY  CAZ   SING  N  N  64  
MYL  CAY  HAY   SING  N  N  65  
MYL  CAZ  HAZ   SING  N  N  66  
MYL  CBE  CBA   SING  N  N  67  
MYL  CBA  HBA   SING  N  N  68  
MYL  CBB  CBH   SING  N  N  69  
MYL  CBB  HBB   SING  N  N  70  
MYL  CBG  CBC   SING  N  N  71  
MYL  CBC  HBC   SING  N  N  72  
MYL  CBE  CBD   SING  N  N  73  
MYL  CBD  CBF   SING  N  N  74  
MYL  CBD  HBD   SING  N  N  75  
MYL  CBF  CBG   SING  N  N  76  
MYL  CBF  HBF   SING  N  N  77  
MYL  CBG  HBG   SING  N  N  78  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
MYL  SMILES            ACDLabs               11.02  "O=C(NC2OCOC1C(OC)C(C(OC12)CC(O)CO)(C)C)C(O)C3(OC)OC(C)C(C(=C)/C3)C"  
MYL  SMILES_CANONICAL  CACTVS                3.352  "CO[C@@H]1[C@H]2OCO[C@@H](NC(=O)[C@@H](O)[C@]3(CC(=C)[C@@H](C)[C@@H](C)O3)OC)[C@H]2O[C@H](C[C@H](O)CO)C1(C)C"  
MYL  SMILES            CACTVS                3.352  "CO[CH]1[CH]2OCO[CH](NC(=O)[CH](O)[C]3(CC(=C)[CH](C)[CH](C)O3)OC)[CH]2O[CH](C[CH](O)CO)C1(C)C"  
MYL  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "C[C@H]1[C@H](O[C@](CC1=C)([C@@H](C(=O)N[C@H]2[C@@H]3[C@@H]([C@H](C([C@H](O3)C[C@@H](CO)O)(C)C)OC)OCO2)O)OC)C"  
MYL  SMILES            "OpenEye OEToolkits"  1.7.0  "CC1C(OC(CC1=C)(C(C(=O)NC2C3C(C(C(C(O3)CC(CO)O)(C)C)OC)OCO2)O)OC)C"  
MYL  InChI             InChI                 1.03   "InChI=1S/C24H41NO10/c1-12-9-24(31-7,35-14(3)13(12)2)19(28)21(29)25-22-18-17(32-11-33-22)20(30-6)23(4,5)16(34-18)8-15(27)10-26/h13-20,22,26-28H,1,8-11H2,2-7H3,(H,25,29)/t13-,14-,15+,16-,17+,18+,19-,20-,22-,24-/m1/s1"  
MYL  InChIKey          InChI                 1.03   IJASURGZDJYQGF-RXLGVIKCSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
MYL  "SYSTEMATIC NAME"  ACDLabs               11.02  "(2S)-N-{(4R,4aS,6R,8S,8aR)-6-[(2S)-2,3-dihydroxypropyl]-8-methoxy-7,7-dimethylhexahydropyrano[3,2-d][1,3]dioxin-4-yl}-2-hydroxy-2-[(2R,5R,6R)-2-methoxy-5,6-dimethyl-4-methylidenetetrahydro-2H-pyran-2-yl]ethanamide (non-preferred name)"  
MYL  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.6.1  "(2S)-N-[(4R,4aS,6R,8S,8aR)-6-[(2S)-2,3-dihydroxypropyl]-8-methoxy-7,7-dimethyl-4a,6,8,8a-tetrahydro-4H-pyrano[3,2-d][1,3]dioxin-4-yl]-2-hydroxy-2-[(2R,5R,6R)-2-methoxy-5,6-dimethyl-4-methylidene-oxan-2-yl]ethanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
MYL  "Create component"   2009-08-21  RCSB  
MYL  "Modify descriptor"  2011-06-04  RCSB  
MYL  "Modify synonyms"    2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     MYL
_pdbx_chem_comp_synonyms.name        "(2S)-N-{(4R,4aS,6R,8S,8aR)-6-[(2S)-2,3-dihydroxypropyl]-8-methoxy-7,7-dimethylhexahydropyrano[3,2-d][1,3]dioxin-4-yl}-2-hydroxy-2-[(2R,5R,6R)-2-methoxy-5,6-dimethyl-4-methylidenetetrahydro-2H-pyran-2-yl]ethanamide"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
