data_3LM
# 
_chem_comp.id                                    3LM 
_chem_comp.name                                  "(2E)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]-4-(methylsulfanyl)but-2-enoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H19 N2 O7 P S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-03-03 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        378.338 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     3LM 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3AEO 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
3LM C    C    C 0 1 N N N 28.204 -15.088 46.106 -2.702 0.688  -1.478 C    3LM 1  
3LM N    N    N 0 1 N N N 29.269 -13.101 45.466 -1.213 -0.430 0.175  N    3LM 2  
3LM O1   O1   O 0 1 N N N 27.101 -15.636 46.201 -3.348 -0.088 -2.155 O1   3LM 3  
3LM P    P    P 0 1 N N N 29.559 -9.396  41.256 3.979  2.319  0.171  P    3LM 4  
3LM N1   N1   N 0 1 Y N N 33.114 -9.542  46.253 2.878  -3.144 0.613  N1   3LM 5  
3LM C2   C2   C 0 1 Y N N 32.475 -10.329 47.128 1.761  -3.768 0.299  C2   3LM 6  
3LM C3   C3   C 0 1 Y N N 31.352 -11.168 46.643 0.677  -3.065 -0.208 C3   3LM 7  
3LM O3   O3   O 0 1 N N N 30.744 -11.935 47.540 -0.474 -3.713 -0.531 O3   3LM 8  
3LM C4   C4   C 0 1 Y N N 30.963 -11.158 45.227 0.785  -1.689 -0.382 C4   3LM 9  
3LM C5   C5   C 0 1 Y N N 31.763 -10.249 44.371 1.978  -1.074 -0.038 C5   3LM 10 
3LM C6   C6   C 0 1 Y N N 32.794 -9.497  44.948 3.013  -1.841 0.461  C6   3LM 11 
3LM CA   CA   C 0 1 N N N 28.530 -14.166 45.028 -2.353 0.339  -0.088 CA   3LM 12 
3LM CB   CB   C 0 1 N N N 28.186 -14.358 43.716 -3.124 0.757  0.919  CB   3LM 13 
3LM SD   SD   S 0 1 N N N 28.406 -16.897 42.458 -5.812 0.475  1.202  SD   3LM 14 
3LM CE   CE   C 0 1 N N N 28.432 -16.882 40.697 -7.250 1.494  0.775  CE   3LM 15 
3LM CG   CG   C 0 1 N N N 27.408 -15.547 43.131 -4.414 1.480  0.631  CG   3LM 16 
3LM C2A  C2A  C 0 1 N N N 32.814 -10.389 48.599 1.659  -5.259 0.492  C2A  3LM 17 
3LM C4A  C4A  C 0 1 N N N 29.850 -12.017 44.632 -0.368 -0.888 -0.930 C4A  3LM 18 
3LM C5A  C5A  C 0 1 N N N 31.501 -10.147 42.889 2.144  0.414  -0.208 C5A  3LM 19 
3LM OP1  OP1  O 0 1 N N N 30.516 -9.372  40.097 3.825  2.856  -1.199 OP1  3LM 20 
3LM OP2  OP2  O 0 1 N N N 28.892 -10.727 41.495 5.532  2.364  0.593  OP2  3LM 21 
3LM OP3  OP3  O 0 1 N N N 28.616 -8.227  41.371 3.118  3.213  1.197  OP3  3LM 22 
3LM OP4  OP4  O 0 1 N N N 30.412 -9.281  42.597 3.454  0.798  0.214  OP4  3LM 23 
3LM O2   O2   O 0 1 N N N 29.071 -15.260 46.987 -2.301 1.864  -1.999 O2   3LM 24 
3LM HN   HN   H 0 1 N N N 28.656 -12.622 46.094 -0.983 -0.659 1.089  HN   3LM 25 
3LM HO3  HO3  H 0 1 N N N 30.047 -12.424 47.119 -1.109 -3.773 0.196  HO3  3LM 26 
3LM H6   H6   H 0 1 N N N 33.366 -8.842  44.307 3.945  -1.367 0.731  H6   3LM 27 
3LM HB   HB   H 0 1 N N N 28.494 -13.593 43.019 -2.822 0.577  1.940  HB   3LM 28 
3LM HE   HE   H 0 1 N N N 29.048 -17.717 40.332 -8.162 0.981  1.078  HE   3LM 29 
3LM HEA  HEA  H 0 1 N N N 27.406 -16.989 40.314 -7.183 2.451  1.292  HEA  3LM 30 
3LM HEB  HEB  H 0 1 N N N 28.858 -15.931 40.345 -7.268 1.664  -0.301 HEB  3LM 31 
3LM HG   HG   H 0 1 N N N 26.793 -15.966 43.941 -4.418 2.438  1.151  HG   3LM 32 
3LM HGA  HGA  H 0 1 N N N 26.786 -15.160 42.311 -4.503 1.650  -0.442 HGA  3LM 33 
3LM H2A  H2A  H 0 1 N N N 33.644 -9.700  48.813 1.283  -5.470 1.493  H2A  3LM 34 
3LM H2A1 H2A1 H 0 0 N N N 31.934 -10.097 49.190 0.975  -5.675 -0.248 H2A1 3LM 35 
3LM H2A2 H2A2 H 0 0 N N N 33.111 -11.414 48.865 2.644  -5.709 0.371  H2A2 3LM 36 
3LM H4A  H4A  H 0 1 N N N 30.271 -12.500 43.738 -0.956 -1.511 -1.604 H4A  3LM 37 
3LM H4A1 H4A1 H 0 0 N N N 29.024 -11.334 44.386 0.016  -0.026 -1.475 H4A1 3LM 38 
3LM H5A  H5A  H 0 1 N N N 32.404 -9.753  42.399 2.009  0.678  -1.257 H5A  3LM 39 
3LM H5A1 H5A1 H 0 0 N N N 31.265 -11.150 42.504 1.401  0.934  0.396  H5A1 3LM 40 
3LM H2   H2   H 0 1 N N N 28.729 -15.836 47.660 -2.550 2.046  -2.915 H2   3LM 41 
3LM HOP2 HOP2 H 0 0 N N N 29.197 -11.355 40.851 5.915  3.252  0.590  HOP2 3LM 42 
3LM HOP3 HOP3 H 0 0 N N N 28.776 -7.620  40.658 3.172  2.919  2.117  HOP3 3LM 43 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
3LM C   O1   DOUB N N 1  
3LM C   CA   SING N N 2  
3LM C   O2   SING N N 3  
3LM N   CA   SING N N 4  
3LM N   C4A  SING N N 5  
3LM P   OP1  DOUB N N 6  
3LM P   OP2  SING N N 7  
3LM P   OP3  SING N N 8  
3LM P   OP4  SING N N 9  
3LM N1  C2   DOUB Y N 10 
3LM N1  C6   SING Y N 11 
3LM C2  C3   SING Y N 12 
3LM C2  C2A  SING N N 13 
3LM C3  O3   SING N N 14 
3LM C3  C4   DOUB Y N 15 
3LM C4  C5   SING Y N 16 
3LM C4  C4A  SING N N 17 
3LM C5  C6   DOUB Y N 18 
3LM C5  C5A  SING N N 19 
3LM CA  CB   DOUB N N 20 
3LM CB  CG   SING N N 21 
3LM SD  CE   SING N N 22 
3LM SD  CG   SING N E 23 
3LM C5A OP4  SING N N 24 
3LM N   HN   SING N N 25 
3LM O3  HO3  SING N N 26 
3LM C6  H6   SING N N 27 
3LM CB  HB   SING N N 28 
3LM CE  HE   SING N N 29 
3LM CE  HEA  SING N N 30 
3LM CE  HEB  SING N N 31 
3LM CG  HG   SING N N 32 
3LM CG  HGA  SING N N 33 
3LM C2A H2A  SING N N 34 
3LM C2A H2A1 SING N N 35 
3LM C2A H2A2 SING N N 36 
3LM C4A H4A  SING N N 37 
3LM C4A H4A1 SING N N 38 
3LM C5A H5A  SING N N 39 
3LM C5A H5A1 SING N N 40 
3LM O2  H2   SING N N 41 
3LM OP2 HOP2 SING N N 42 
3LM OP3 HOP3 SING N N 43 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
3LM SMILES           ACDLabs              12.01 "O=P(O)(O)OCc1cnc(c(O)c1CNC(=C/CSC)/C(=O)O)C"                                                                                                     
3LM SMILES_CANONICAL CACTVS               3.370 "CSC\C=C(NCc1c(O)c(C)ncc1CO[P](O)(O)=O)/C(O)=O"                                                                                                   
3LM SMILES           CACTVS               3.370 "CSCC=C(NCc1c(O)c(C)ncc1CO[P](O)(O)=O)C(O)=O"                                                                                                     
3LM SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "Cc1c(c(c(cn1)COP(=O)(O)O)CN/C(=C/CSC)/C(=O)O)O"                                                                                                  
3LM SMILES           "OpenEye OEToolkits" 1.7.0 "Cc1c(c(c(cn1)COP(=O)(O)O)CNC(=CCSC)C(=O)O)O"                                                                                                     
3LM InChI            InChI                1.03  "InChI=1S/C13H19N2O7PS/c1-8-12(16)10(6-15-11(13(17)18)3-4-24-2)9(5-14-8)7-22-23(19,20)21/h3,5,15-16H,4,6-7H2,1-2H3,(H,17,18)(H2,19,20,21)/b11-3+" 
3LM InChIKey         InChI                1.03  LPFNPHQQDYAHKU-QDEBKDIKSA-N                                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
3LM "SYSTEMATIC NAME" ACDLabs              12.01 "(2E)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]-4-(methylsulfanyl)but-2-enoic acid" 
3LM "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(E)-2-[[3-hydroxy-2-methyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]-4-methylsulfanyl-but-2-enoic acid"       
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
3LM "Create component"     2010-03-03 PDBJ 
3LM "Modify aromatic_flag" 2011-06-04 RCSB 
3LM "Modify descriptor"    2011-06-04 RCSB 
# 
