data_K5M
#

_chem_comp.id                                   K5M
_chem_comp.name                                 "4-[3-(methylsulfonyl)phenoxy]-N-[(1S,3S,5S)-2-oxobicyclo[3.1.0]hexan-3-yl]butanamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C17 H21 N O5 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-10-31
_chem_comp.pdbx_modified_date                   2019-03-29
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       351.417
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    K5M
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6MWZ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
K5M  C10   C1   C  0  1  Y  N  N  12.228  -22.563   9.398   2.747   0.449  -0.030  C10   K5M   1  
K5M  C13   C2   C  0  1  Y  N  N  10.925  -23.777   7.196   5.264   1.560  -0.321  C13   K5M   2  
K5M  C21   C3   C  0  1  N  N  N  20.736  -19.739  11.202  -6.965   0.994   0.856  C21   K5M   3  
K5M  C22   C4   C  0  1  N  N  S  21.488  -19.296  10.094  -8.231   0.231   0.411  C22   K5M   4  
K5M  C24   C5   C  0  1  N  N  N  21.727  -17.954   9.357  -8.288  -1.277   0.667  C24   K5M   5  
K5M  C02   C6   C  0  1  N  N  N  19.112  -19.275   9.478  -6.282  -0.512  -0.890  C02   K5M   6  
K5M  C03   C7   C  0  1  N  N  S  19.205  -19.195  10.868  -5.804   0.056   0.442  C03   K5M   7  
K5M  C05   C8   C  0  1  N  N  N  16.795  -19.439  11.676  -3.374   0.177   0.307  C05   K5M   8  
K5M  C06   C9   C  0  1  N  N  N  15.694  -20.350  12.274  -2.096   0.955   0.126  C06   K5M   9  
K5M  C07   C10  C  0  1  N  N  N  14.348  -20.255  11.480  -0.902   0.003   0.214  C07   K5M  10  
K5M  C08   C11  C  0  1  N  N  N  14.106  -21.226  10.277   0.396   0.793   0.031  C08   K5M  11  
K5M  C11   C12  C  0  1  Y  N  N  12.008  -23.949   9.359   2.884   1.813  -0.245  C11   K5M  12  
K5M  C12   C13  C  0  1  Y  N  N  11.371  -24.556   8.264   4.142   2.365  -0.390  C12   K5M  13  
K5M  C14   C14  C  0  1  Y  N  N  11.134  -22.398   7.244   5.130   0.202  -0.101  C14   K5M  14  
K5M  C16   C15  C  0  1  N  N  N  11.124  -19.591   6.216   7.020  -0.811   1.741  C16   K5M  15  
K5M  C19   C16  C  0  1  Y  N  N  11.771  -21.799   8.333   3.875  -0.356   0.045  C19   K5M  16  
K5M  C23   C17  C  0  1  N  N  S  20.551  -18.871   8.921  -7.780  -0.729  -0.705  C23   K5M  17  
K5M  N04   N1   N  0  1  N  N  N  18.146  -20.003  11.483  -4.561   0.812   0.266  N04   K5M  18  
K5M  O01   O1   O  0  1  N  N  N  18.242  -19.561   8.732  -5.620  -0.738  -1.874  O01   K5M  19  
K5M  O09   O2   O  0  1  N  N  N  12.875  -21.924  10.502   1.511  -0.097   0.113  O09   K5M  20  
K5M  O17   O3   O  0  1  N  N  N  10.956  -21.781   4.576   6.099  -2.107  -0.402  O17   K5M  21  
K5M  O18   O4   O  0  1  N  N  N   9.100  -21.326   5.815   7.535  -0.129  -0.786  O18   K5M  22  
K5M  O20   O5   O  0  1  N  N  N  16.560  -18.311  11.360  -3.333  -1.022   0.488  O20   K5M  23  
K5M  S15   S1   S  0  1  N  N  N  10.565  -21.302   5.905   6.563  -0.821  -0.014  S15   K5M  24  
K5M  H131  H1   H  0  0  N  N  N  10.429  -24.231   6.351   6.246   1.994  -0.435  H131  K5M  25  
K5M  H212  H2   H  0  0  N  N  N  20.756  -20.836  11.278  -6.890   1.949   0.337  H212  K5M  26  
K5M  H211  H3   H  0  0  N  N  N  21.115  -19.299  12.136  -6.968   1.145   1.936  H211  K5M  27  
K5M  H221  H4   H  0  0  N  N  N  22.207  -20.053   9.748  -9.160   0.797   0.335  H221  K5M  28  
K5M  H241  H5   H  0  0  N  N  N  22.603  -17.836   8.702  -7.558  -1.697   1.358  H241  K5M  29  
K5M  H242  H6   H  0  0  N  N  N  21.521  -17.002   9.869  -9.271  -1.747   0.680  H242  K5M  30  
K5M  H031  H7   H  0  0  N  N  N  19.136  -18.153  11.213  -5.671  -0.740   1.176  H031  K5M  31  
K5M  H061  H8   H  0  0  N  N  N  15.512  -20.048  13.316  -2.102   1.441  -0.850  H061  K5M  32  
K5M  H062  H9   H  0  0  N  N  N  16.046  -21.392  12.251  -2.017   1.710   0.908  H062  K5M  33  
K5M  H071  H10  H  0  0  N  N  N  14.278  -19.230  11.086  -0.896  -0.484   1.190  H071  K5M  34  
K5M  H072  H11  H  0  0  N  N  N  13.536  -20.427  12.201  -0.981  -0.753  -0.568  H072  K5M  35  
K5M  H081  H12  H  0  0  N  N  N  14.935  -21.946  10.208   0.390   1.279  -0.945  H081  K5M  36  
K5M  H082  H13  H  0  0  N  N  N  14.042  -20.650   9.342   0.475   1.548   0.813  H082  K5M  37  
K5M  H111  H14  H  0  0  N  N  N  12.335  -24.560  10.187   2.008   2.442  -0.299  H111  K5M  38  
K5M  H121  H15  H  0  0  N  N  N  11.226  -25.626   8.249   4.249   3.427  -0.557  H121  K5M  39  
K5M  H161  H16  H  0  0  N  N  N  10.808  -19.278   7.222   7.907  -1.427   1.889  H161  K5M  40  
K5M  H163  H17  H  0  0  N  N  N  12.221  -19.545   6.146   7.230   0.211   2.056  H163  K5M  41  
K5M  H162  H18  H  0  0  N  N  N  10.680  -18.919   5.467   6.197  -1.212   2.333  H162  K5M  42  
K5M  H191  H19  H  0  0  N  N  N  11.910  -20.728   8.347   3.771  -1.417   0.217  H191  K5M  43  
K5M  H231  H20  H  0  0  N  N  N  20.786  -19.420   7.997  -8.375  -0.906  -1.600  H231  K5M  44  
K5M  H041  H21  H  0  0  N  N  N  18.340  -20.940  11.773  -4.594   1.771   0.122  H041  K5M  45  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
K5M  O17  S15   DOUB  N  N   1  
K5M  O18  S15   DOUB  N  N   2  
K5M  S15  C16   SING  N  N   3  
K5M  S15  C14   SING  N  N   4  
K5M  C13  C14   DOUB  Y  N   5  
K5M  C13  C12   SING  Y  N   6  
K5M  C14  C19   SING  Y  N   7  
K5M  C12  C11   DOUB  Y  N   8  
K5M  C19  C10   DOUB  Y  N   9  
K5M  O01  C02   DOUB  N  N  10  
K5M  C23  C24   SING  N  N  11  
K5M  C23  C02   SING  N  N  12  
K5M  C23  C22   SING  N  N  13  
K5M  C24  C22   SING  N  N  14  
K5M  C11  C10   SING  Y  N  15  
K5M  C10  O09   SING  N  N  16  
K5M  C02  C03   SING  N  N  17  
K5M  C22  C21   SING  N  N  18  
K5M  C08  O09   SING  N  N  19  
K5M  C08  C07   SING  N  N  20  
K5M  C03  C21   SING  N  N  21  
K5M  C03  N04   SING  N  N  22  
K5M  O20  C05   DOUB  N  N  23  
K5M  C07  C06   SING  N  N  24  
K5M  N04  C05   SING  N  N  25  
K5M  C05  C06   SING  N  N  26  
K5M  C13  H131  SING  N  N  27  
K5M  C21  H212  SING  N  N  28  
K5M  C21  H211  SING  N  N  29  
K5M  C22  H221  SING  N  N  30  
K5M  C24  H241  SING  N  N  31  
K5M  C24  H242  SING  N  N  32  
K5M  C03  H031  SING  N  N  33  
K5M  C06  H061  SING  N  N  34  
K5M  C06  H062  SING  N  N  35  
K5M  C07  H071  SING  N  N  36  
K5M  C07  H072  SING  N  N  37  
K5M  C08  H081  SING  N  N  38  
K5M  C08  H082  SING  N  N  39  
K5M  C11  H111  SING  N  N  40  
K5M  C12  H121  SING  N  N  41  
K5M  C16  H161  SING  N  N  42  
K5M  C16  H163  SING  N  N  43  
K5M  C16  H162  SING  N  N  44  
K5M  C19  H191  SING  N  N  45  
K5M  C23  H231  SING  N  N  46  
K5M  N04  H041  SING  N  N  47  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
K5M  SMILES            ACDLabs               12.01  "c3(OCCCC(NC2CC1CC1C2=O)=O)cccc(c3)S(C)(=O)=O"  
K5M  InChI             InChI                 1.03   "InChI=1S/C17H21NO5S/c1-24(21,22)13-5-2-4-12(10-13)23-7-3-6-16(19)18-15-9-11-8-14(11)17(15)20/h2,4-5,10-11,14-15H,3,6-9H2,1H3,(H,18,19)/t11-,14-,15-/m0/s1"  
K5M  InChIKey          InChI                 1.03   MNLBJMNPVMBTLW-CQDKDKBSSA-N  
K5M  SMILES_CANONICAL  CACTVS                3.385  "C[S](=O)(=O)c1cccc(OCCCC(=O)N[C@H]2C[C@@H]3C[C@@H]3C2=O)c1"  
K5M  SMILES            CACTVS                3.385  "C[S](=O)(=O)c1cccc(OCCCC(=O)N[CH]2C[CH]3C[CH]3C2=O)c1"  
K5M  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "CS(=O)(=O)c1cccc(c1)OCCCC(=O)N[C@H]2C[C@@H]3C[C@@H]3C2=O"  
K5M  SMILES            "OpenEye OEToolkits"  2.0.6  "CS(=O)(=O)c1cccc(c1)OCCCC(=O)NC2CC3CC3C2=O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
K5M  "SYSTEMATIC NAME"  ACDLabs               12.01  "4-[3-(methylsulfonyl)phenoxy]-N-[(1S,3S,5S)-2-oxobicyclo[3.1.0]hexan-3-yl]butanamide"  
K5M  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "4-(3-methylsulfonylphenoxy)-~{N}-[(1~{S},3~{S},5~{S})-2-oxidanylidene-3-bicyclo[3.1.0]hexanyl]butanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
K5M  "Create component"  2018-10-31  RCSB  
K5M  "Initial release"   2019-04-03  RCSB  
##
