data_VSM
# 
_chem_comp.id                                    VSM 
_chem_comp.name                                  "[(3~{S},5~{S},8~{S},13~{R},14~{R})-5,14-dimethyl-16-oxidanylidene-1,2,3,4,6,7,8,11,12,13,15,17-dodecahydrocyclopenta[a]phenanthren-3-yl] sulfamate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H29 N O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-03-31 
_chem_comp.pdbx_modified_date                    2024-04-05 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        367.503 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VSM 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8OLM 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VSM C1  C1  C 0 1 N N N N N N -3.547 4.995  13.895 -0.811 -1.502 -0.081 C1  VSM 1  
VSM C2  C2  C 0 1 N N N N N N -3.498 3.493  14.357 -2.214 -1.326 -0.630 C2  VSM 2  
VSM C3  C3  C 0 1 N N S N N N -4.868 2.991  14.695 -2.780 0.045  -0.278 C3  VSM 3  
VSM O3  O1  O 0 1 N N N N N N -4.828 1.518  15.016 -4.109 0.159  -0.791 O3  VSM 4  
VSM C4  C4  C 0 1 N N N N N N -5.687 3.048  13.480 -1.897 1.128  -0.900 C4  VSM 5  
VSM C5  C5  C 0 1 N N S N N N -5.580 4.368  12.665 -0.518 1.092  -0.237 C5  VSM 6  
VSM C6  C6  C 0 1 N N N N N N -5.684 4.046  11.121 0.387  2.085  -0.970 C6  VSM 7  
VSM C7  C7  C 0 1 N N N N N N -6.086 5.365  10.300 1.809  1.950  -0.429 C7  VSM 8  
VSM C8  C8  C 0 1 N N S N N N -4.825 6.286  10.505 2.355  0.568  -0.747 C8  VSM 9  
VSM C9  C9  C 0 1 N N N N N N -4.124 6.177  11.816 1.330  -0.516 -0.543 C9  VSM 10 
VSM C10 C10 C 0 1 N N N N N N -4.360 5.127  12.751 0.059  -0.290 -0.305 C10 VSM 11 
VSM C11 C11 C 0 1 N N N N N N -2.919 6.981  11.889 1.764  -1.970 -0.613 C11 VSM 12 
VSM C12 C12 C 0 1 N N N N N N -3.102 8.402  11.293 3.056  -2.181 0.194  C12 VSM 13 
VSM C13 C13 C 0 1 N N R N N N -3.752 8.323  9.935  4.065  -1.154 -0.288 C13 VSM 14 
VSM C14 C14 C 0 1 N N R N N N -5.107 7.776  10.069 3.541  0.243  0.145  C14 VSM 15 
VSM C15 C15 C 0 1 N N N N N N -5.543 7.943  8.597  4.769  1.133  -0.027 C15 VSM 16 
VSM C16 C16 C 0 1 N N N N N N -4.853 9.118  8.173  5.972  0.222  0.190  C16 VSM 17 
VSM C17 C17 C 0 1 N N N N N N -3.955 9.622  9.147  5.431  -1.192 0.406  C17 VSM 18 
VSM C18 C18 C 0 1 N N N N N N -6.079 8.587  10.995 3.100  0.207  1.609  C18 VSM 19 
VSM C   C19 C 0 1 N N N N N N -6.681 5.212  13.284 -0.649 1.515  1.227  C   VSM 20 
VSM O16 O2  O 0 1 N N N N N N -5.021 9.640  7.031  7.133  0.554  0.191  O16 VSM 21 
VSM S22 S1  S 0 1 N N N N N N -5.523 1.038  16.370 -5.194 -0.191 0.218  S22 VSM 22 
VSM O20 O3  O 0 1 N N N N N N -7.006 1.432  16.394 -6.418 -0.220 -0.503 O20 VSM 23 
VSM O21 O4  O 0 1 N N N N N N -4.801 1.522  17.608 -4.705 -1.296 0.965  O21 VSM 24 
VSM N19 N1  N 0 1 N N N N N N -5.335 -0.521 16.295 -5.306 1.077  1.277  N19 VSM 25 
VSM H1  H1  H 0 1 N N N N N N -2.528 5.335  13.658 -0.875 -1.696 0.990  H1  VSM 26 
VSM H2  H2  H 0 1 N N N N N N -3.960 5.611  14.707 -0.348 -2.361 -0.566 H2  VSM 27 
VSM H3  H3  H 0 1 N N N N N N -3.080 2.880  13.545 -2.188 -1.434 -1.715 H3  VSM 28 
VSM H4  H4  H 0 1 N N N N N N -2.855 3.411  15.246 -2.861 -2.098 -0.211 H4  VSM 29 
VSM H5  H5  H 0 1 N N N N N N -5.315 3.567  15.519 -2.796 0.165  0.805  H5  VSM 30 
VSM H6  H6  H 0 1 N N N N N N -6.739 2.914  13.773 -1.793 0.943  -1.969 H6  VSM 31 
VSM H7  H7  H 0 1 N N N N N N -5.381 2.219  12.825 -2.354 2.105  -0.742 H7  VSM 32 
VSM H8  H8  H 0 1 N N N N N N -6.450 3.273  10.963 0.381  1.864  -2.038 H8  VSM 33 
VSM H9  H9  H 0 1 N N N N N N -4.712 3.677  10.761 0.026  3.100  -0.805 H9  VSM 34 
VSM H10 H10 H 0 1 N N N N N N -6.992 5.832  10.715 2.445  2.706  -0.890 H10 VSM 35 
VSM H11 H11 H 0 1 N N N N N N -6.245 5.138  9.235  1.800  2.096  0.651  H11 VSM 36 
VSM H12 H12 H 0 1 N N N N N N -4.100 5.921  9.763  2.688  0.550  -1.785 H12 VSM 37 
VSM H15 H15 H 0 1 N N N N N N -2.121 6.468  11.333 0.976  -2.602 -0.204 H15 VSM 38 
VSM H16 H16 H 0 1 N N N N N N -2.626 7.079  12.945 1.942  -2.244 -1.653 H16 VSM 39 
VSM H17 H17 H 0 1 N N N N N N -2.118 8.884  11.196 2.858  -2.036 1.256  H17 VSM 40 
VSM H18 H18 H 0 1 N N N N N N -3.737 8.998  11.965 3.440  -3.187 0.023  H18 VSM 41 
VSM H19 H19 H 0 1 N N N N N N -3.157 7.640  9.310  4.171  -1.205 -1.371 H19 VSM 42 
VSM H20 H20 H 0 1 N N N N N N -6.632 8.079  8.523  4.792  1.554  -1.032 H20 VSM 43 
VSM H21 H21 H 0 1 N N N N N N -5.241 7.072  7.997  4.762  1.932  0.715  H21 VSM 44 
VSM H22 H22 H 0 1 N N N N N N -3.019 9.990  8.701  5.317  -1.402 1.469  H22 VSM 45 
VSM H23 H23 H 0 1 N N N N N N -4.407 10.416 9.760  6.082  -1.929 -0.065 H23 VSM 46 
VSM H24 H24 H 0 1 N N N N N N -5.770 8.469  12.044 3.944  -0.080 2.236  H24 VSM 47 
VSM H25 H25 H 0 1 N N N N N N -6.044 9.651  10.720 2.746  1.195  1.906  H25 VSM 48 
VSM H26 H26 H 0 1 N N N N N N -7.105 8.209  10.870 2.295  -0.518 1.729  H26 VSM 49 
VSM H27 H27 H 0 1 N N N N N N -6.477 5.353  14.356 0.334  1.506  1.698  H27 VSM 50 
VSM H28 H28 H 0 1 N N N N N N -6.716 6.192  12.785 -1.068 2.520  1.280  H28 VSM 51 
VSM H29 H29 H 0 1 N N N N N N -7.648 4.702  13.159 -1.307 0.819  1.748  H29 VSM 52 
VSM H30 H30 H 0 1 N N N N N N -5.738 -0.945 17.106 -6.154 1.282  1.701  H30 VSM 53 
VSM H31 H31 H 0 1 N N N N N N -5.787 -0.872 15.475 -4.523 1.616  1.474  H31 VSM 54 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VSM O16 C16 DOUB N N 1  
VSM C16 C15 SING N N 2  
VSM C16 C17 SING N N 3  
VSM C15 C14 SING N N 4  
VSM C17 C13 SING N N 5  
VSM C13 C14 SING N N 6  
VSM C13 C12 SING N N 7  
VSM C14 C8  SING N N 8  
VSM C14 C18 SING N N 9  
VSM C7  C8  SING N N 10 
VSM C7  C6  SING N N 11 
VSM C8  C9  SING N N 12 
VSM C6  C5  SING N N 13 
VSM C12 C11 SING N N 14 
VSM C9  C11 SING N N 15 
VSM C9  C10 DOUB N N 16 
VSM C5  C10 SING N N 17 
VSM C5  C   SING N N 18 
VSM C5  C4  SING N N 19 
VSM C10 C1  SING N N 20 
VSM C4  C3  SING N N 21 
VSM C1  C2  SING N N 22 
VSM C2  C3  SING N N 23 
VSM C3  O3  SING N N 24 
VSM O3  S22 SING N N 25 
VSM N19 S22 SING N N 26 
VSM S22 O20 DOUB N N 27 
VSM S22 O21 DOUB N N 28 
VSM C1  H1  SING N N 29 
VSM C1  H2  SING N N 30 
VSM C2  H3  SING N N 31 
VSM C2  H4  SING N N 32 
VSM C3  H5  SING N N 33 
VSM C4  H6  SING N N 34 
VSM C4  H7  SING N N 35 
VSM C6  H8  SING N N 36 
VSM C6  H9  SING N N 37 
VSM C7  H10 SING N N 38 
VSM C7  H11 SING N N 39 
VSM C8  H12 SING N N 40 
VSM C11 H15 SING N N 41 
VSM C11 H16 SING N N 42 
VSM C12 H17 SING N N 43 
VSM C12 H18 SING N N 44 
VSM C13 H19 SING N N 45 
VSM C15 H20 SING N N 46 
VSM C15 H21 SING N N 47 
VSM C17 H22 SING N N 48 
VSM C17 H23 SING N N 49 
VSM C18 H24 SING N N 50 
VSM C18 H25 SING N N 51 
VSM C18 H26 SING N N 52 
VSM C   H27 SING N N 53 
VSM C   H28 SING N N 54 
VSM C   H29 SING N N 55 
VSM N19 H30 SING N N 56 
VSM N19 H31 SING N N 57 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VSM InChI            InChI                1.06  "InChI=1S/C19H29NO4S/c1-18-8-7-17-15(5-3-12-9-13(21)10-19(12,17)2)16(18)6-4-14(11-18)24-25(20,22)23/h12,14,17H,3-11H2,1-2H3,(H2,20,22,23)/t12-,14+,17-,18+,19-/m1/s1" 
VSM InChIKey         InChI                1.06  DJFIEPZQLUEUTN-ZOLDJLEQSA-N                                                                                                                                           
VSM SMILES_CANONICAL CACTVS               3.385 "C[C@@]12CC[C@@H]3C(=C1CC[C@@H](C2)O[S](N)(=O)=O)CC[C@@H]4CC(=O)C[C@@]34C"                                                                                            
VSM SMILES           CACTVS               3.385 "C[C]12CC[CH]3C(=C1CC[CH](C2)O[S](N)(=O)=O)CC[CH]4CC(=O)C[C]34C"                                                                                                      
VSM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@]12CC[C@@H]3C(=C1CC[C@@H](C2)OS(=O)(=O)N)CC[C@H]4[C@]3(CC(=O)C4)C"                                                                                              
VSM SMILES           "OpenEye OEToolkits" 2.0.7 "CC12CCC3C(=C1CCC(C2)OS(=O)(=O)N)CCC4C3(CC(=O)C4)C"                                                                                                                   
# 
_pdbx_chem_comp_identifier.comp_id           VSM 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[(3~{S},5~{S},8~{S},13~{R},14~{R})-5,14-dimethyl-16-oxidanylidene-1,2,3,4,6,7,8,11,12,13,15,17-dodecahydrocyclopenta[a]phenanthren-3-yl] sulfamate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VSM "Create component"     2023-03-31 PDBE 
VSM "Modify aromatic_flag" 2024-04-03 PDBE 
VSM "Initial release"      2024-04-10 RCSB 
# 
