data_RVO
# 
_chem_comp.id                                    RVO 
_chem_comp.name                                  "5-chloro-6-{(3R)-3-[(pyridin-4-yl)oxy]pyrrolidin-1-yl}pyrimidin-4-amine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H14 Cl N5 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-06-23 
_chem_comp.pdbx_modified_date                    2022-07-08 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        291.736 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     RVO 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5SOK 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
RVO C16  C1  C  0 1 Y N N -54.101 -26.290 10.102 -4.865 0.183  1.265  C16  RVO 1  
RVO C17  C2  C  0 1 N N N -52.901 -29.559 6.515  -0.214 0.908  0.448  C17  RVO 2  
RVO C15  C3  C  0 1 Y N N -54.882 -25.933 11.221 -6.148 0.109  0.763  C15  RVO 3  
RVO C13  C4  C  0 1 Y N N -55.943 -27.983 11.255 -5.366 -0.086 -1.399 C13  RVO 4  
RVO C12  C5  C  0 1 Y N N -55.221 -28.428 10.148 -4.055 -0.007 -0.976 C12  RVO 5  
RVO C11  C6  C  0 1 Y N N -54.272 -27.555 9.555  -3.788 0.124  0.384  C11  RVO 6  
RVO C19  C7  C  0 1 Y N N -50.084 -28.947 3.516  3.356  2.375  -0.216 C19  RVO 7  
RVO C02  C8  C  0 1 Y N N -48.297 -29.035 4.966  4.460  0.354  -0.138 C02  RVO 8  
RVO C03  C9  C  0 1 Y N N -49.177 -29.176 6.045  3.249  -0.288 0.104  C03  RVO 9  
RVO C05  C10 C  0 1 Y N N -50.560 -29.193 5.766  2.094  0.487  0.175  C05  RVO 10 
RVO C07  C11 C  0 1 N N N -51.451 -29.743 8.323  0.502  -1.042 -0.680 C07  RVO 11 
RVO C08  C12 C  0 1 N N N -52.938 -30.096 8.772  -1.035 -1.180 -0.537 C08  RVO 12 
RVO C09  C13 C  0 1 N N R -53.643 -29.326 7.993  -1.474 0.248  -0.142 C09  RVO 13 
RVO N01  N1  N  0 1 N N N -46.854 -29.027 5.203  5.638  -0.374 -0.220 N01  RVO 14 
RVO N06  N2  N  0 1 N N N -51.612 -29.349 6.791  0.863  -0.105 0.414  N06  RVO 15 
RVO N14  N3  N  0 1 Y N N -55.768 -26.764 11.768 -6.360 -0.022 -0.533 N14  RVO 16 
RVO N18  N4  N  0 1 Y N N -50.960 -29.082 4.510  2.190  1.805  0.012  N18  RVO 17 
RVO N20  N5  N  0 1 Y N N -48.773 -28.929 3.726  4.470  1.677  -0.291 N20  RVO 18 
RVO O10  O1  O  0 1 N N N -53.468 -27.952 8.377  -2.512 0.194  0.840  O10  RVO 19 
RVO CL04 CL1 CL 0 0 N N N -48.520 -29.318 7.695  3.179  -2.010 0.310  CL04 RVO 20 
RVO H161 H1  H  0 0 N N N -53.388 -25.597 9.681  -4.699 0.289  2.327  H161 RVO 21 
RVO H172 H2  H  0 0 N N N -53.269 -28.838 5.770  0.069  1.772  -0.154 H172 RVO 22 
RVO H171 H3  H  0 0 N N N -53.065 -30.583 6.147  -0.403 1.215  1.477  H171 RVO 23 
RVO H151 H4  H  0 0 N N N -54.757 -24.950 11.650 -6.989 0.158  1.438  H151 RVO 24 
RVO H131 H5  H  0 0 N N N -56.665 -28.645 11.710 -5.581 -0.193 -2.452 H131 RVO 25 
RVO H121 H6  H  0 0 N N N -55.381 -29.419 9.749  -3.246 -0.061 -1.690 H121 RVO 26 
RVO H191 H7  H  0 0 N N N -50.452 -28.849 2.505  3.399  3.446  -0.349 H191 RVO 27 
RVO H071 H8  H  0 0 N N N -50.788 -30.613 8.438  0.990  -2.007 -0.537 H071 RVO 28 
RVO H072 H9  H  0 0 N N N -51.053 -28.900 8.907  0.762  -0.622 -1.652 H072 RVO 29 
RVO H082 H10 H  0 0 N N N -53.104 -29.853 9.832  -1.485 -1.475 -1.485 H082 RVO 30 
RVO H081 H11 H  0 0 N N N -53.167 -31.158 8.599  -1.286 -1.895 0.247  H081 RVO 31 
RVO H091 H12 H  0 0 N N N -54.704 -29.604 7.910  -1.814 0.798  -1.020 H091 RVO 32 
RVO H011 H13 H  0 0 N N N -46.373 -28.935 4.331  5.622  -1.337 -0.108 H011 RVO 33 
RVO H012 H14 H  0 0 N N N -46.618 -28.257 5.796  6.478  0.081  -0.388 H012 RVO 34 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
RVO C19 N20  DOUB Y N 1  
RVO C19 N18  SING Y N 2  
RVO N20 C02  SING Y N 3  
RVO N18 C05  DOUB Y N 4  
RVO C02 N01  SING N N 5  
RVO C02 C03  DOUB Y N 6  
RVO C05 C03  SING Y N 7  
RVO C05 N06  SING N N 8  
RVO C03 CL04 SING N N 9  
RVO C17 N06  SING N N 10 
RVO C17 C09  SING N N 11 
RVO N06 C07  SING N N 12 
RVO C09 O10  SING N N 13 
RVO C09 C08  SING N N 14 
RVO C07 C08  SING N N 15 
RVO O10 C11  SING N N 16 
RVO C11 C16  DOUB Y N 17 
RVO C11 C12  SING Y N 18 
RVO C16 C15  SING Y N 19 
RVO C12 C13  DOUB Y N 20 
RVO C15 N14  DOUB Y N 21 
RVO C13 N14  SING Y N 22 
RVO C16 H161 SING N N 23 
RVO C17 H172 SING N N 24 
RVO C17 H171 SING N N 25 
RVO C15 H151 SING N N 26 
RVO C13 H131 SING N N 27 
RVO C12 H121 SING N N 28 
RVO C19 H191 SING N N 29 
RVO C07 H071 SING N N 30 
RVO C07 H072 SING N N 31 
RVO C08 H082 SING N N 32 
RVO C08 H081 SING N N 33 
RVO C09 H091 SING N N 34 
RVO N01 H011 SING N N 35 
RVO N01 H012 SING N N 36 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
RVO SMILES           ACDLabs              12.01 "Clc1c(ncnc1N)N1CCC(C1)Oc1ccncc1"                                                                                                  
RVO InChI            InChI                1.06  "InChI=1S/C13H14ClN5O/c14-11-12(15)17-8-18-13(11)19-6-3-10(7-19)20-9-1-4-16-5-2-9/h1-2,4-5,8,10H,3,6-7H2,(H2,15,17,18)/t10-/m1/s1" 
RVO InChIKey         InChI                1.06  SILGAHKEYSAGRL-SNVBAGLBSA-N                                                                                                        
RVO SMILES_CANONICAL CACTVS               3.385 "Nc1ncnc(N2CC[C@H](C2)Oc3ccncc3)c1Cl"                                                                                              
RVO SMILES           CACTVS               3.385 "Nc1ncnc(N2CC[CH](C2)Oc3ccncc3)c1Cl"                                                                                               
RVO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cnccc1O[C@@H]2CCN(C2)c3c(c(ncn3)N)Cl"                                                                                           
RVO SMILES           "OpenEye OEToolkits" 2.0.7 "c1cnccc1OC2CCN(C2)c3c(c(ncn3)N)Cl"                                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
RVO "SYSTEMATIC NAME" ACDLabs              12.01 "5-chloro-6-{(3R)-3-[(pyridin-4-yl)oxy]pyrrolidin-1-yl}pyrimidin-4-amine"   
RVO "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-chloranyl-6-[(3~{R})-3-pyridin-4-yloxypyrrolidin-1-yl]pyrimidin-4-amine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
RVO "Create component" 2022-06-23 RCSB 
RVO "Initial release"  2022-07-13 RCSB 
# 
