data_G2Q
# 
_chem_comp.id                                    G2Q 
_chem_comp.name                                  "GUANOSINE DIPHOSPHATE RIBOSE" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H23 N5 O14 P2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-08-24 
_chem_comp.pdbx_modified_date                    2011-11-25 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        559.316 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     G2Q 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3ZWO 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
G2Q N1     N1     N 0 1 N N N 20.646 5.452  -55.152 -7.299 -3.418 0.023  N1     G2Q 1  
G2Q C2     C2     C 0 1 N N N 21.754 6.046  -55.699 -7.082 -2.674 -1.040 C2     G2Q 2  
G2Q N2     N2     N 0 1 N N N 22.820 5.999  -54.863 -7.814 -2.912 -2.172 N2     G2Q 3  
G2Q N3     N3     N 0 1 N N N 21.677 6.594  -56.964 -6.159 -1.677 -1.057 N3     G2Q 4  
G2Q C4     C4     C 0 1 Y N N 20.502 6.537  -57.678 -5.405 -1.406 0.055  C4     G2Q 5  
G2Q C5     C5     C 0 1 Y N N 19.369 5.923  -57.130 -5.601 -2.169 1.201  C5     G2Q 6  
G2Q C6     C6     C 0 1 N N N 19.456 5.382  -55.852 -6.611 -3.230 1.160  C6     G2Q 7  
G2Q O6     O6     O 0 1 N N N 18.497 4.827  -55.318 -6.822 -3.928 2.139  O6     G2Q 8  
G2Q N7     N7     N 0 1 Y N N 18.349 5.980  -57.995 -4.746 -1.709 2.144  N7     G2Q 9  
G2Q C8     C8     C 0 1 Y N N 18.790 6.614  -59.067 -4.051 -0.725 1.648  C8     G2Q 10 
G2Q N9     N9     N 0 1 Y N N 20.085 6.949  -58.898 -4.429 -0.506 0.355  N9     G2Q 11 
G2Q PA     PA     P 0 1 N N N 17.879 12.093 -61.947 1.427  2.804  0.400  PA     G2Q 12 
G2Q PB     PB     P 0 1 N N N 16.714 9.823  -63.334 4.061  1.466  0.633  PB     G2Q 13 
G2Q "C1'"  "C1'"  C 0 1 N N R 20.878 7.728  -59.930 -3.883 0.512  -0.546 "C1'"  G2Q 14 
G2Q O1A    O1A    O 0 1 N N N 17.954 12.988 -63.119 1.300  2.891  1.872  O1A    G2Q 15 
G2Q O1B    O1B    O 0 1 N N N 17.971 9.879  -64.144 3.975  1.401  2.110  O1B    G2Q 16 
G2Q C1X    C1X    C 0 1 N N N 15.798 5.484  -60.106 7.184  -2.626 -2.094 C1X    G2Q 17 
G2Q "C2'"  "C2'"  C 0 1 N N R 20.219 7.655  -61.285 -4.716 1.810  -0.458 "C2'"  G2Q 18 
G2Q "O2'"  "O2'"  O 0 1 N N N 20.910 6.636  -61.950 -5.655 1.877  -1.533 "O2'"  G2Q 19 
G2Q O2A    O2A    O 0 1 N N N 17.631 12.626 -60.576 1.778  4.258  -0.195 O2A    G2Q 20 
G2Q O2B    O2B    O 0 1 N N N 15.381 9.745  -64.030 5.078  2.638  0.206  O2B    G2Q 21 
G2Q C2X    C2X    C 0 1 N N S 14.440 5.770  -59.444 8.191  -2.753 -0.922 C2X    G2Q 22 
G2Q O2X    O2X    O 0 1 N N N 13.477 4.722  -59.619 8.815  -4.038 -0.923 O2X    G2Q 23 
G2Q "C3'"  "C3'"  C 0 1 N N S 20.524 9.007  -61.955 -3.667 2.938  -0.580 "C3'"  G2Q 24 
G2Q "O3'"  "O3'"  O 0 1 N N N 21.623 8.904  -62.898 -3.924 3.737  -1.737 "O3'"  G2Q 25 
G2Q O3A    O3A    O 0 1 N N N 16.677 11.068 -62.287 2.603  1.771  0.024  O3A    G2Q 26 
G2Q C3X    C3X    C 0 1 N N S 13.948 6.997  -60.201 7.274  -2.584 0.313  C3X    G2Q 27 
G2Q O3X    O3X    O 0 1 N N N 12.636 6.767  -60.651 6.924  -3.860 0.854  O3X    G2Q 28 
G2Q "C4'"  "C4'"  C 0 1 N N R 20.903 9.922  -60.773 -2.325 2.188  -0.728 "C4'"  G2Q 29 
G2Q "O4'"  "O4'"  O 0 1 N N N 20.677 9.129  -59.580 -2.556 0.896  -0.125 "O4'"  G2Q 30 
G2Q C4X    C4X    C 0 1 N N R 14.914 7.195  -61.406 6.025  -1.868 -0.237 C4X    G2Q 31 
G2Q O4X    O4X    O 0 1 N N N 15.633 5.942  -61.494 6.257  -1.619 -1.634 O4X    G2Q 32 
G2Q "C5'"  "C5'"  C 0 1 N N N 19.953 11.113 -60.679 -1.214 2.932  0.017  "C5'"  G2Q 33 
G2Q "O5'"  "O5'"  O 0 1 N N N 19.223 11.243 -61.904 0.037  2.288  -0.228 "O5'"  G2Q 34 
G2Q C5X    C5X    C 0 1 N N N 15.868 8.418  -61.138 5.818  -0.543 0.500  C5X    G2Q 35 
G2Q O5X    O5X    O 0 1 N N N 16.856 8.604  -62.188 4.597  0.058  0.065  O5X    G2Q 36 
G2Q HN2    HN2    H 0 1 N N N 22.733 5.565  -53.966 -8.478 -3.619 -2.180 HN2    G2Q 37 
G2Q HN2A   HN2A   H 0 0 N N N 23.693 6.398  -55.143 -7.669 -2.374 -2.966 HN2A   G2Q 38 
G2Q HN3    HN3    H 0 1 N N N 22.480 7.035  -57.364 -6.033 -1.152 -1.863 HN3    G2Q 39 
G2Q H8     H8     H 0 1 N N N 18.202 6.831  -59.946 -3.293 -0.169 2.178  H8     G2Q 40 
G2Q "H1'"  "H1'"  H 0 1 N N N 21.912 7.352  -59.951 -3.864 0.140  -1.570 "H1'"  G2Q 41 
G2Q H1X    H1X    H 0 1 N N N 16.041 4.412  -60.067 7.690  -2.297 -3.001 H1X    G2Q 42 
G2Q H1XA   H1XA   H 0 0 N N N 16.609 6.029  -59.601 6.671  -3.573 -2.263 H1XA   G2Q 43 
G2Q "H2'"  "H2'"  H 0 1 N N N 19.136 7.465  -61.273 -5.231 1.870  0.502  "H2'"  G2Q 44 
G2Q "HO2'" "HO2'" H 0 0 N N N 20.551 6.526  -62.822 -6.205 2.672  -1.526 "HO2'" G2Q 45 
G2Q HO2A   HO2A   H 0 0 N N N 17.541 13.571 -60.615 1.876  4.275  -1.157 HO2A   G2Q 46 
G2Q HO2B   HO2B   H 0 0 N N N 15.514 9.741  -64.971 5.184  2.738  -0.750 HO2B   G2Q 47 
G2Q H2X    H2X    H 0 1 N N N 14.555 5.885  -58.356 8.937  -1.960 -0.964 H2X    G2Q 48 
G2Q HO2X   HO2X   H 0 0 N N N 12.665 4.962  -59.188 9.329  -4.225 -1.721 HO2X   G2Q 49 
G2Q "H3'"  "H3'"  H 0 1 N N N 19.672 9.384  -62.540 -3.663 3.555  0.319  "H3'"  G2Q 50 
G2Q "HO3'" "HO3'" H 0 0 N N N 21.784 9.754  -63.292 -4.782 4.183  -1.724 "HO3'" G2Q 51 
G2Q H3X    H3X    H 0 1 N N N 13.937 7.894  -59.565 7.763  -1.971 1.071  H3X    G2Q 52 
G2Q HO3X   HO3X   H 0 0 N N N 12.325 7.530  -61.124 7.680  -4.377 1.163  HO3X   G2Q 53 
G2Q "H4'"  "H4'"  H 0 1 N N N 21.935 10.285 -60.892 -2.066 2.077  -1.781 "H4'"  G2Q 54 
G2Q H4X    H4X    H 0 1 N N N 14.398 7.426  -62.350 5.148  -2.503 -0.112 H4X    G2Q 55 
G2Q "H5'"  "H5'"  H 0 1 N N N 19.249 10.955 -59.849 -1.168 3.962  -0.336 "H5'"  G2Q 56 
G2Q "H5'A" "H5'A" H 0 0 N N N 20.533 12.030 -60.500 -1.425 2.923  1.086  "H5'A" G2Q 57 
G2Q H5X    H5X    H 0 1 N N N 15.254 9.329  -61.074 5.770  -0.728 1.573  H5X    G2Q 58 
G2Q H5XA   H5XA   H 0 0 N N N 16.398 8.243  -60.190 6.650  0.127  0.283  H5XA   G2Q 59 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
G2Q C6    N1     SING N N 1  
G2Q C2    N1     DOUB N N 2  
G2Q N3    C2     SING N N 3  
G2Q C2    N2     SING N N 4  
G2Q N2    HN2    SING N N 5  
G2Q N2    HN2A   SING N N 6  
G2Q C4    N3     SING N N 7  
G2Q N3    HN3    SING N N 8  
G2Q N9    C4     SING Y N 9  
G2Q C4    C5     DOUB Y N 10 
G2Q N7    C5     SING Y N 11 
G2Q C5    C6     SING N N 12 
G2Q C6    O6     DOUB N N 13 
G2Q C8    N7     DOUB Y N 14 
G2Q C8    N9     SING Y N 15 
G2Q C8    H8     SING N N 16 
G2Q "C1'" N9     SING N N 17 
G2Q O1A   PA     DOUB N N 18 
G2Q O3A   PA     SING N N 19 
G2Q PA    "O5'"  SING N N 20 
G2Q PA    O2A    SING N N 21 
G2Q O1B   PB     DOUB N N 22 
G2Q O2B   PB     SING N N 23 
G2Q PB    O3A    SING N N 24 
G2Q PB    O5X    SING N N 25 
G2Q "C2'" "C1'"  SING N N 26 
G2Q "C1'" "O4'"  SING N N 27 
G2Q "C1'" "H1'"  SING N N 28 
G2Q O4X   C1X    SING N N 29 
G2Q C1X   C2X    SING N N 30 
G2Q C1X   H1X    SING N N 31 
G2Q C1X   H1XA   SING N N 32 
G2Q "C3'" "C2'"  SING N N 33 
G2Q "O2'" "C2'"  SING N N 34 
G2Q "C2'" "H2'"  SING N N 35 
G2Q "O2'" "HO2'" SING N N 36 
G2Q O2A   HO2A   SING N N 37 
G2Q O2B   HO2B   SING N N 38 
G2Q C3X   C2X    SING N N 39 
G2Q O2X   C2X    SING N N 40 
G2Q C2X   H2X    SING N N 41 
G2Q O2X   HO2X   SING N N 42 
G2Q "O3'" "C3'"  SING N N 43 
G2Q "C3'" "C4'"  SING N N 44 
G2Q "C3'" "H3'"  SING N N 45 
G2Q "O3'" "HO3'" SING N N 46 
G2Q C4X   C3X    SING N N 47 
G2Q O3X   C3X    SING N N 48 
G2Q C3X   H3X    SING N N 49 
G2Q O3X   HO3X   SING N N 50 
G2Q "C4'" "C5'"  SING N N 51 
G2Q "C4'" "O4'"  SING N N 52 
G2Q "C4'" "H4'"  SING N N 53 
G2Q O4X   C4X    SING N N 54 
G2Q C4X   C5X    SING N N 55 
G2Q C4X   H4X    SING N N 56 
G2Q "O5'" "C5'"  SING N N 57 
G2Q "C5'" "H5'"  SING N N 58 
G2Q "C5'" "H5'A" SING N N 59 
G2Q O5X   C5X    SING N N 60 
G2Q C5X   H5X    SING N N 61 
G2Q C5X   H5XA   SING N N 62 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
G2Q InChI            InChI                1.03  
"InChI=1S/C15H23N5O14P2/c16-15-18-12-8(13(25)19-15)17-4-20(12)14-11(24)10(23)7(33-14)3-32-36(28,29)34-35(26,27)31-2-6-9(22)5(21)1-30-6/h4-7,9-11,14,21-24H,1-3H2,(H,26,27)(H,28,29)(H3,16,18,19,25)/t5-,6+,7+,9-,10+,11+,14+/m0/s1" 
G2Q InChIKey         InChI                1.03  NOLLEWZDVQOFJY-ZVIMGNLFSA-N 
G2Q SMILES           ACDLabs              12.01 "O=P(O)(OCC1OCC(O)C1O)OP(=O)(O)OCC4OC(n2cnc3c2NC(=NC3=O)N)C(O)C4O" 
G2Q SMILES_CANONICAL CACTVS               3.370 "NC1=NC(=O)c2ncn([C@@H]3O[C@H](CO[P](O)(=O)O[P](O)(=O)OC[C@H]4OC[C@H](O)[C@@H]4O)[C@@H](O)[C@H]3O)c2N1" 
G2Q SMILES           CACTVS               3.370 "NC1=NC(=O)c2ncn([CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH]4OC[CH](O)[CH]4O)[CH](O)[CH]3O)c2N1" 
G2Q SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)OC[C@@H]4[C@H]([C@H](CO4)O)O)O)O)NC(=NC2=O)N" 
G2Q SMILES           "OpenEye OEToolkits" 1.7.2 "c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OCC4C(C(CO4)O)O)O)O)NC(=NC2=O)N" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
G2Q "SYSTEMATIC NAME" ACDLabs              12.01 "[(2R,3S,4R,5R)-5-(2-amino-6-oxo-3,6-dihydro-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl [(2R,3S,4S)-3,4-dihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate (non-preferred name)" 
G2Q "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "[[(2R,3S,4R,5R)-5-(2-azanyl-6-oxidanylidene-3H-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2R,3S,4S)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate"              
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
G2Q "Create component" 2011-08-24 EBI 
# 
