data_3ZR
# 
_chem_comp.id                                    3ZR 
_chem_comp.name                                  "diethyl [(1R,2S)-2-[(N-{[(3-chlorobenzyl)oxy]carbonyl}-3-cyclohexyl-L-alanyl)amino]-1-hydroxy-3-(2-oxo-2H-pyrrol-3-yl)propyl]phosphonate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H39 Cl N3 O8 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-12-18 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        612.051 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     3ZR 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4XBB 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
3ZR C13 C1  C  0 1 N N S N N N 39.481 38.740 12.559 -0.803 -1.422 -0.004 C13 3ZR 1  
3ZR C14 C2  C  0 1 N N N N N N 40.210 39.859 11.826 -0.603 -2.660 -0.880 C14 3ZR 2  
3ZR C15 C3  C  0 1 N N N N N N 39.537 41.229 12.004 0.701  -3.358 -0.488 C15 3ZR 3  
3ZR C16 C4  C  0 1 N N N N N N 38.113 41.262 11.444 0.976  -4.508 -1.459 C16 3ZR 4  
3ZR C17 C5  C  0 1 N N N N N N 37.513 42.666 11.524 2.280  -5.205 -1.067 C17 3ZR 5  
3ZR C18 C6  C  0 1 N N N N N N 38.404 43.705 10.877 2.156  -5.757 0.354  C18 3ZR 6  
3ZR C19 C7  C  0 1 N N N N N N 39.821 43.656 11.433 1.881  -4.607 1.325  C19 3ZR 7  
3ZR C20 C8  C  0 1 N N N N N N 40.396 42.260 11.280 0.577  -3.909 0.933  C20 3ZR 8  
3ZR C21 C9  C  0 1 N N N N N N 40.110 37.416 12.222 0.327  -0.453 -0.237 C21 3ZR 9  
3ZR C24 C10 C  0 1 N N N N N N 38.793 34.275 11.463 2.429  1.388  1.298  C24 3ZR 10 
3ZR C25 C11 C  0 1 N N N N N N 38.977 33.785 12.884 1.136  2.132  1.088  C25 3ZR 11 
3ZR C27 C12 C  0 1 N N N N N N 39.696 33.158 14.904 -1.003 2.874  1.136  C27 3ZR 12 
3ZR C29 C13 C  0 1 N N N N N N 38.041 32.919 13.454 0.908  3.311  0.197  C29 3ZR 13 
3ZR C31 C14 C  0 1 N N R N N N 39.984 35.223 9.391  3.954  -0.350 0.352  C31 3ZR 14 
3ZR O01 O1  O  0 1 N N N N N N 38.242 37.127 14.600 -3.199 -2.113 1.029  O01 3ZR 15 
3ZR C02 C15 C  0 1 N N N N N N 38.912 38.129 14.853 -3.225 -1.236 0.188  C02 3ZR 16 
3ZR O03 O2  O  0 1 N N N N N N 39.156 38.522 16.225 -4.403 -0.720 -0.210 O03 3ZR 17 
3ZR C04 C16 C  0 1 N N N N N N 38.550 37.900 17.368 -5.601 -1.259 0.408  C04 3ZR 18 
3ZR C05 C17 C  0 1 Y N N N N N 37.240 38.578 17.756 -6.814 -0.565 -0.158 C05 3ZR 19 
3ZR C06 C18 C  0 1 Y N N N N N 37.197 39.440 18.683 -7.442 -1.076 -1.278 C06 3ZR 20 
3ZR C07 C19 C  0 1 Y N N N N N 36.118 40.032 19.006 -8.554 -0.440 -1.798 C07 3ZR 21 
3ZR C08 C20 C  0 1 Y N N N N N 34.997 39.715 18.514 -9.039 0.706  -1.197 C08 3ZR 22 
3ZR C09 C21 C  0 1 Y N N N N N 34.950 38.807 17.530 -8.411 1.217  -0.075 C09 3ZR 23 
3ZR CL  CL1 CL 0 0 N N N N N N 33.426 38.311 16.782 -9.019 2.657  0.680  CL  3ZR 24 
3ZR C11 C22 C  0 1 Y N N N N N 36.102 38.249 17.125 -7.301 0.578  0.447  C11 3ZR 25 
3ZR N12 N1  N  0 1 N N N N N N 39.495 38.945 13.979 -2.075 -0.781 -0.347 N12 3ZR 26 
3ZR N22 N2  N  0 1 N N N N N N 39.441 36.739 11.318 1.530  -0.671 0.332  N22 3ZR 27 
3ZR C23 C23 C  0 1 N N S N N N 39.557 35.408 10.829 2.592  0.330  0.205  C23 3ZR 28 
3ZR C26 C24 C  0 1 N N N N N N 40.037 33.912 13.775 -0.049 1.870  1.659  C26 3ZR 29 
3ZR N28 N3  N  0 1 N N N N N N 38.487 32.546 14.678 -0.386 3.664  0.305  N28 3ZR 30 
3ZR O30 O3  O  0 1 N N N N N N 36.931 32.543 12.883 1.737  3.850  -0.497 O30 3ZR 31 
3ZR O32 O4  O  0 1 N N N N N N 40.964 36.191 8.985  4.047  -0.956 1.643  O32 3ZR 32 
3ZR O41 O5  O  0 1 N N N N N N 41.114 37.010 12.766 0.155  0.522  -0.938 O41 3ZR 33 
3ZR H1  H1  H  0 1 N N N N N N 38.439 38.726 12.207 -0.817 -1.718 1.045  H1  3ZR 34 
3ZR H2  H2  H  0 1 N N N N N N 40.235 39.617 10.753 -1.439 -3.345 -0.738 H2  3ZR 35 
3ZR H3  H3  H  0 1 N N N N N N 41.238 39.920 12.213 -0.554 -2.360 -1.927 H3  3ZR 36 
3ZR H4  H4  H  0 1 N N N N N N 39.506 41.475 13.076 1.522  -2.642 -0.530 H4  3ZR 37 
3ZR H5  H5  H  0 1 N N N N N N 37.484 40.571 12.025 0.154  -5.223 -1.418 H5  3ZR 38 
3ZR H6  H6  H  0 1 N N N N N N 38.135 40.942 10.392 1.064  -4.115 -2.472 H6  3ZR 39 
3ZR H7  H7  H  0 1 N N N N N N 37.370 42.931 12.582 2.476  -6.025 -1.759 H7  3ZR 40 
3ZR H8  H8  H  0 1 N N N N N N 36.540 42.665 11.012 3.101  -4.490 -1.109 H8  3ZR 41 
3ZR H9  H9  H  0 1 N N N N N N 37.982 44.703 11.064 1.334  -6.472 0.396  H9  3ZR 42 
3ZR H10 H10 H  0 1 N N N N N N 38.440 43.519 9.793  3.085  -6.254 0.634  H10 3ZR 43 
3ZR H11 H11 H  0 1 N N N N N N 40.452 44.371 10.884 1.793  -5.000 2.338  H11 3ZR 44 
3ZR H12 H12 H  0 1 N N N N N N 39.803 43.927 12.499 2.702  -3.892 1.283  H12 3ZR 45 
3ZR H13 H13 H  0 1 N N N N N N 40.439 42.005 10.211 0.381  -3.090 1.625  H13 3ZR 46 
3ZR H14 H14 H  0 1 N N N N N N 41.411 42.242 11.702 -0.245 -4.624 0.975  H14 3ZR 47 
3ZR H15 H15 H  0 1 N N N N N N 37.733 34.559 11.387 3.263  2.089  1.252  H15 3ZR 48 
3ZR H16 H16 H  0 1 N N N N N N 38.985 33.400 10.825 2.415  0.903  2.274  H16 3ZR 49 
3ZR H17 H17 H  0 1 N N N N N N 40.286 33.072 15.804 -2.048 2.939  1.400  H17 3ZR 50 
3ZR H18 H18 H  0 1 N N N N N N 40.681 34.390 9.569  4.063  -1.115 -0.417 H18 3ZR 51 
3ZR H20 H20 H  0 1 N N N N N N 38.348 36.844 17.133 -5.666 -2.328 0.205  H20 3ZR 52 
3ZR H21 H21 H  0 1 N N N N N N 39.247 37.960 18.217 -5.559 -1.096 1.485  H21 3ZR 53 
3ZR H22 H22 H  0 1 N N N N N N 38.105 39.680 19.216 -7.063 -1.971 -1.748 H22 3ZR 54 
3ZR H23 H23 H  0 1 N N N N N N 36.161 40.835 19.727 -9.044 -0.839 -2.674 H23 3ZR 55 
3ZR H24 H24 H  0 1 N N N N N N 34.089 40.170 18.882 -9.907 1.203  -1.604 H24 3ZR 56 
3ZR H25 H25 H  0 1 N N N N N N 36.113 37.547 16.305 -6.811 0.976  1.323  H25 3ZR 57 
3ZR H26 H26 H  0 1 N N N N N N 39.972 39.750 14.333 -2.089 -0.028 -0.959 H26 3ZR 58 
3ZR H27 H27 H  0 1 N N N N N N 38.705 37.262 10.888 1.692  -1.490 0.826  H27 3ZR 59 
3ZR H28 H28 H  0 1 N N N N N N 40.532 35.178 11.284 2.528  0.806  -0.774 H28 3ZR 60 
3ZR H29 H29 H  0 1 N N N N N N 40.944 34.480 13.626 -0.266 1.080  2.362  H29 3ZR 61 
3ZR H30 H30 H  0 1 N N N N N N 41.203 36.039 8.078  3.959  -0.332 2.377  H30 3ZR 62 
3ZR P1  P1  P  0 1 N Y N N N N ?      ?      ?      5.277  0.891  0.166  P1  3ZR 63 
3ZR O1  O6  O  0 1 N Y N N N N ?      ?      ?      5.347  1.723  1.387  O1  3ZR 64 
3ZR O2  O7  O  0 1 N Y N N N N ?      ?      ?      6.686  0.144  -0.056 O2  3ZR 65 
3ZR O3  O8  O  0 1 N Y N N N N ?      ?      ?      4.959  1.827  -1.105 O3  3ZR 66 
3ZR C5  C25 C  0 1 N Y N N N N ?      ?      ?      5.755  2.961  -1.453 C5  3ZR 67 
3ZR C6  C26 C  0 1 N Y N N N N ?      ?      ?      5.178  3.623  -2.707 C6  3ZR 68 
3ZR C7  C27 C  0 1 N Y N N N N ?      ?      ?      7.932  0.839  -0.132 C7  3ZR 69 
3ZR C8  C28 C  0 1 N Y N N N N ?      ?      ?      9.065  -0.166 -0.347 C8  3ZR 70 
3ZR H19 H19 H  0 1 N N N N N N ?      ?      ?      5.749  3.676  -0.630 H19 3ZR 71 
3ZR H31 H31 H  0 1 N N N N N N ?      ?      ?      6.778  2.641  -1.650 H31 3ZR 72 
3ZR H32 H32 H  0 1 N N N N N N ?      ?      ?      5.184  2.908  -3.530 H32 3ZR 73 
3ZR H33 H33 H  0 1 N N N N N N ?      ?      ?      4.155  3.943  -2.510 H33 3ZR 74 
3ZR H34 H34 H  0 1 N N N N N N ?      ?      ?      5.785  4.489  -2.973 H34 3ZR 75 
3ZR H35 H35 H  0 1 N N N N N N ?      ?      ?      7.906  1.542  -0.965 H35 3ZR 76 
3ZR H36 H36 H  0 1 N N N N N N ?      ?      ?      8.101  1.384  0.798  H36 3ZR 77 
3ZR H37 H37 H  0 1 N N N N N N ?      ?      ?      9.091  -0.868 0.487  H37 3ZR 78 
3ZR H38 H38 H  0 1 N N N N N N ?      ?      ?      8.896  -0.710 -1.276 H38 3ZR 79 
3ZR H39 H39 H  0 1 N N N N N N ?      ?      ?      10.015 0.365  -0.404 H39 3ZR 80 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
3ZR O32 C31 SING N N 1  
3ZR C31 C23 SING N N 2  
3ZR C23 N22 SING N N 3  
3ZR C23 C24 SING N N 4  
3ZR C18 C19 SING N N 5  
3ZR C18 C17 SING N N 6  
3ZR C20 C19 SING N N 7  
3ZR C20 C15 SING N N 8  
3ZR N22 C21 SING N N 9  
3ZR C16 C17 SING N N 10 
3ZR C16 C15 SING N N 11 
3ZR C24 C25 SING N N 12 
3ZR C14 C15 SING N N 13 
3ZR C14 C13 SING N N 14 
3ZR C21 C13 SING N N 15 
3ZR C21 O41 DOUB N N 16 
3ZR C13 N12 SING N N 17 
3ZR O30 C29 DOUB N N 18 
3ZR C25 C29 SING N N 19 
3ZR C25 C26 DOUB N N 20 
3ZR C29 N28 SING N N 21 
3ZR C26 C27 SING N N 22 
3ZR N12 C02 SING N N 23 
3ZR O01 C02 DOUB N N 24 
3ZR N28 C27 DOUB N N 25 
3ZR C02 O03 SING N N 26 
3ZR O03 C04 SING N N 27 
3ZR CL  C09 SING N N 28 
3ZR C11 C09 DOUB Y N 29 
3ZR C11 C05 SING Y N 30 
3ZR C04 C05 SING N N 31 
3ZR C09 C08 SING Y N 32 
3ZR C05 C06 DOUB Y N 33 
3ZR C08 C07 DOUB Y N 34 
3ZR C06 C07 SING Y N 35 
3ZR C13 H1  SING N N 36 
3ZR C14 H2  SING N N 37 
3ZR C14 H3  SING N N 38 
3ZR C15 H4  SING N N 39 
3ZR C16 H5  SING N N 40 
3ZR C16 H6  SING N N 41 
3ZR C17 H7  SING N N 42 
3ZR C17 H8  SING N N 43 
3ZR C18 H9  SING N N 44 
3ZR C18 H10 SING N N 45 
3ZR C19 H11 SING N N 46 
3ZR C19 H12 SING N N 47 
3ZR C20 H13 SING N N 48 
3ZR C20 H14 SING N N 49 
3ZR C24 H15 SING N N 50 
3ZR C24 H16 SING N N 51 
3ZR C27 H17 SING N N 52 
3ZR C31 H18 SING N N 53 
3ZR C04 H20 SING N N 54 
3ZR C04 H21 SING N N 55 
3ZR C06 H22 SING N N 56 
3ZR C07 H23 SING N N 57 
3ZR C08 H24 SING N N 58 
3ZR C11 H25 SING N N 59 
3ZR N12 H26 SING N N 60 
3ZR N22 H27 SING N N 61 
3ZR C23 H28 SING N N 62 
3ZR C26 H29 SING N N 63 
3ZR O32 H30 SING N N 64 
3ZR C31 P1  SING N N 65 
3ZR P1  O1  DOUB N N 66 
3ZR P1  O2  SING N N 67 
3ZR P1  O3  SING N N 68 
3ZR O3  C5  SING N N 69 
3ZR C5  C6  SING N N 70 
3ZR O2  C7  SING N N 71 
3ZR C7  C8  SING N N 72 
3ZR C5  H19 SING N N 73 
3ZR C5  H31 SING N N 74 
3ZR C6  H32 SING N N 75 
3ZR C6  H33 SING N N 76 
3ZR C6  H34 SING N N 77 
3ZR C7  H35 SING N N 78 
3ZR C7  H36 SING N N 79 
3ZR C8  H37 SING N N 80 
3ZR C8  H38 SING N N 81 
3ZR C8  H39 SING N N 82 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
3ZR SMILES           ACDLabs              12.01 "O=C1N=CC=C1CC(NC(=O)C(NC(=O)OCc2cccc(Cl)c2)CC3CCCCC3)C(O)P(=O)(OCC)OCC"                                                                                                                                                                   
3ZR InChI            InChI                1.03  "InChI=1S/C28H39ClN3O8P/c1-3-39-41(37,40-4-2)27(35)24(17-21-13-14-30-25(21)33)31-26(34)23(16-19-9-6-5-7-10-19)32-28(36)38-18-20-11-8-12-22(29)15-20/h8,11-15,19,23-24,27,35H,3-7,9-10,16-18H2,1-2H3,(H,31,34)(H,32,36)/t23-,24-,27?/m0/s1" 
3ZR InChIKey         InChI                1.03  MWLFTRMZFWFMSR-HFKGTQBBSA-N                                                                                                                                                                                                                
3ZR SMILES_CANONICAL CACTVS               3.385 "CCO[P](=O)(OCC)[C@@H](O)[C@H](CC1=CC=NC1=O)NC(=O)[C@H](CC2CCCCC2)NC(=O)OCc3cccc(Cl)c3"                                                                                                                                                    
3ZR SMILES           CACTVS               3.385 "CCO[P](=O)(OCC)[CH](O)[CH](CC1=CC=NC1=O)NC(=O)[CH](CC2CCCCC2)NC(=O)OCc3cccc(Cl)c3"                                                                                                                                                        
3ZR SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CCOP(=O)([C@H]([C@H](CC1=CC=NC1=O)NC(=O)[C@H](CC2CCCCC2)NC(=O)OCc3cccc(c3)Cl)O)OCC"                                                                                                                                                       
3ZR SMILES           "OpenEye OEToolkits" 1.9.2 "CCOP(=O)(C(C(CC1=CC=NC1=O)NC(=O)C(CC2CCCCC2)NC(=O)OCc3cccc(c3)Cl)O)OCC"                                                                                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
3ZR "SYSTEMATIC NAME" ACDLabs              12.01 "diethyl [(1R,2S)-2-[(N-{[(3-chlorobenzyl)oxy]carbonyl}-3-cyclohexyl-L-alanyl)amino]-1-hydroxy-3-(2-oxo-2H-pyrrol-3-yl)propyl]phosphonate"                                       
3ZR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(3-chlorophenyl)methyl N-[(2S)-3-cyclohexyl-1-[[(1R,2S)-1-diethoxyphosphoryl-1-oxidanyl-3-(2-oxidanylidenepyrrol-3-yl)propan-2-yl]amino]-1-oxidanylidene-propan-2-yl]carbamate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
3ZR "Create component" 2014-12-18 RCSB 
3ZR "Initial release"  2015-03-25 RCSB 
3ZR "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            3ZR 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C31 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
