data_HER
# 
_chem_comp.id                                    HER 
_chem_comp.name                                  "7-methoxy-3,5-bis(oxidanyl)-2-[3,4,5-tris(oxidanyl)phenyl]chromen-4-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C16 H12 O8" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2020-12-23 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        332.262 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     HER 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7DPU 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
HER C4  C1  C 0 1 Y N N N N N 13.505 14.747 39.244 4.134  0.470  0.781  C4  HER 1  
HER C5  C2  C 0 1 Y N N N N N 13.232 13.773 40.189 2.782  0.755  0.740  C5  HER 2  
HER C6  C3  C 0 1 Y N N N N N 14.233 13.387 41.091 1.921  -0.056 -0.005 C6  HER 3  
HER C7  C4  C 0 1 N N N N N N 14.045 12.302 42.060 0.478  0.246  -0.052 C7  HER 4  
HER C8  C5  C 0 1 Y N N N N N 14.527 11.599 44.291 -1.734 -0.559 0.114  C8  HER 5  
HER C10 C6  C 0 1 N N N N N N 13.547 9.996  42.701 -1.302 1.833  -0.344 C10 HER 6  
HER C13 C7  C 0 1 Y N N N N N 15.010 11.060 46.545 -3.977 -1.398 0.286  C13 HER 7  
HER C15 C8  C 0 1 Y N N N N N 14.059 9.389  45.100 -3.632 0.939  -0.154 C15 HER 8  
HER C1  C9  C 0 1 Y N N N N N 15.514 13.935 40.968 2.430  -1.152 -0.706 C1  HER 9  
HER C11 C10 C 0 1 N N N N N N 13.600 11.056 41.731 0.083  1.527  -0.296 C11 HER 10 
HER C12 C11 C 0 1 Y N N N N N 15.015 11.998 45.523 -2.609 -1.615 0.318  C12 HER 11 
HER C14 C12 C 0 1 Y N N N N N 14.533 9.753  46.339 -4.489 -0.126 0.050  C14 HER 12 
HER C16 C13 C 0 1 N N N N N N 16.059 12.613 48.012 -6.226 -2.150 0.442  C16 HER 13 
HER C2  C14 C 0 1 Y N N N N N 15.782 14.901 40.024 3.783  -1.432 -0.661 C2  HER 14 
HER C3  C15 C 0 1 Y N N N N N 14.777 15.316 39.155 4.638  -0.623 0.082  C3  HER 15 
HER C9  C16 C 0 1 Y N N N N N 14.045 10.316 44.033 -2.248 0.727  -0.124 C9  HER 16 
HER O1  O1  O 0 1 N N N N N N 14.548 12.549 43.312 -0.399 -0.754 0.142  O1  HER 17 
HER O2  O2  O 0 1 N N N N N N 13.098 8.863  42.389 -1.693 2.970  -0.555 O2  HER 18 
HER O3  O3  O 0 1 N N N N N N 13.151 10.788 40.479 1.009  2.505  -0.491 O3  HER 19 
HER O4  O4  O 0 1 N N N N N N 13.604 8.131  44.902 -4.129 2.181  -0.385 O4  HER 20 
HER O5  O5  O 0 1 N N N N N N 15.469 11.335 47.795 -4.827 -2.438 0.487  O5  HER 21 
HER O6  O6  O 0 1 N N N N N N 17.024 15.466 39.922 4.280  -2.499 -1.343 O6  HER 22 
HER O7  O7  O 0 1 N N N N N N 15.052 16.274 38.223 5.969  -0.901 0.125  O7  HER 23 
HER O8  O8  O 0 1 N N N N N N 12.556 15.183 38.362 4.973  1.261  1.502  O8  HER 24 
HER H1  H1  H 0 1 N N N N N N 12.255 13.314 40.231 2.391  1.602  1.283  H1  HER 25 
HER H2  H2  H 0 1 N N N N N N 16.304 13.596 41.622 1.767  -1.781 -1.283 H2  HER 26 
HER H3  H3  H 0 1 N N N N N N 15.385 13.000 45.682 -2.224 -2.607 0.502  H3  HER 27 
HER H4  H4  H 0 1 N N N N N N 14.539 9.039  47.149 -5.557 0.029  0.029  H4  HER 28 
HER H5  H5  H 0 1 N N N N N N 16.382 12.695 49.060 -6.483 -1.747 -0.538 H5  HER 29 
HER H6  H6  H 0 1 N N N N N N 16.929 12.732 47.350 -6.792 -3.065 0.618  H6  HER 30 
HER H7  H7  H 0 1 N N N N N N 15.321 13.399 47.793 -6.472 -1.418 1.212  H7  HER 31 
HER H8  H8  H 0 1 N N N N N N 12.853 9.887  40.435 0.629  3.378  -0.657 H8  HER 32 
HER H9  H9  H 0 1 N N N N N N 13.311 8.038  44.003 -4.269 2.704  0.416  H9  HER 33 
HER H10 H10 H 0 1 N N N N N N 17.600 15.086 40.575 4.553  -2.295 -2.247 H10 HER 34 
HER H11 H11 H 0 1 N N N N N N 15.959 16.546 38.306 6.224  -1.494 0.845  H11 HER 35 
HER H12 H12 H 0 1 N N N N N N 11.740 14.724 38.522 5.087  0.981  2.420  H12 HER 36 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
HER O7  C3  SING N N 1  
HER O8  C4  SING N N 2  
HER C3  C4  DOUB Y N 3  
HER C3  C2  SING Y N 4  
HER C4  C5  SING Y N 5  
HER O6  C2  SING N N 6  
HER C2  C1  DOUB Y N 7  
HER C5  C6  DOUB Y N 8  
HER O3  C11 SING N N 9  
HER C1  C6  SING Y N 10 
HER C6  C7  SING N N 11 
HER C11 C7  DOUB N N 12 
HER C11 C10 SING N N 13 
HER C7  O1  SING N N 14 
HER O2  C10 DOUB N N 15 
HER C10 C9  SING N N 16 
HER O1  C8  SING N N 17 
HER C9  C8  DOUB Y N 18 
HER C9  C15 SING Y N 19 
HER C8  C12 SING Y N 20 
HER O4  C15 SING N N 21 
HER C15 C14 DOUB Y N 22 
HER C12 C13 DOUB Y N 23 
HER C14 C13 SING Y N 24 
HER C13 O5  SING N N 25 
HER O5  C16 SING N N 26 
HER C5  H1  SING N N 27 
HER C1  H2  SING N N 28 
HER C12 H3  SING N N 29 
HER C14 H4  SING N N 30 
HER C16 H5  SING N N 31 
HER C16 H6  SING N N 32 
HER C16 H7  SING N N 33 
HER O3  H8  SING N N 34 
HER O4  H9  SING N N 35 
HER O6  H10 SING N N 36 
HER O7  H11 SING N N 37 
HER O8  H12 SING N N 38 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
HER InChI            InChI                1.03  "InChI=1S/C16H12O8/c1-23-7-4-8(17)12-11(5-7)24-16(15(22)14(12)21)6-2-9(18)13(20)10(19)3-6/h2-5,17-20,22H,1H3" 
HER InChIKey         InChI                1.03  BDZXSHDKBKYQKJ-UHFFFAOYSA-N                                                                                   
HER SMILES_CANONICAL CACTVS               3.385 "COc1cc(O)c2C(=O)C(=C(Oc2c1)c3cc(O)c(O)c(O)c3)O"                                                              
HER SMILES           CACTVS               3.385 "COc1cc(O)c2C(=O)C(=C(Oc2c1)c3cc(O)c(O)c(O)c3)O"                                                              
HER SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1cc(c2c(c1)OC(=C(C2=O)O)c3cc(c(c(c3)O)O)O)O"                                                              
HER SMILES           "OpenEye OEToolkits" 2.0.7 "COc1cc(c2c(c1)OC(=C(C2=O)O)c3cc(c(c(c3)O)O)O)O"                                                              
# 
_pdbx_chem_comp_identifier.comp_id           HER 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "7-methoxy-3,5-bis(oxidanyl)-2-[3,4,5-tris(oxidanyl)phenyl]chromen-4-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
HER "Create component" 2020-12-23 PDBJ 
HER "Initial release"  2021-05-12 RCSB 
HER "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            HER 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C5 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
