data_RXR
# 
_chem_comp.id                                    RXR 
_chem_comp.name                                  "[2,2,5,5-tetramethyl-3,4-bis(sulfanylmethyl)-2,5-dihydro-1H-pyrrol-1-yl]oxidanyl radical" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C10 H18 N O S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "3,4-bis(thiomethyl)-2,2,5,5-tetramethyl-1H-Pyrrol-1-yloxyl radical" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-01-08 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        232.386 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     RXR 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   Y 
_chem_comp.pdbx_model_coordinates_db_code        3L2X 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
RXR N1   N1   N 0 1 N N N N N N 44.140 -6.287  1.001  ? ? ? N1   RXR 1  
RXR O1   O1   O 0 1 N N N N N N 44.973 -5.785  1.819  ? ? ? O1   RXR 2  
RXR C2   C2   C 0 1 N N N N N N 44.158 -7.687  0.598  ? ? ? C2   RXR 3  
RXR C3   C3   C 0 1 N N N N N N 42.930 -7.767  -0.270 ? ? ? C3   RXR 4  
RXR C4   C4   C 0 1 N N N N N N 42.390 -6.568  -0.471 ? ? ? C4   RXR 5  
RXR C5   C5   C 0 1 N N N N N N 43.073 -5.517  0.372  ? ? ? C5   RXR 6  
RXR C6   C6   C 0 1 N N N N N N 43.615 -4.403  -0.515 ? ? ? C6   RXR 7  
RXR C7   C7   C 0 1 N N N N N N 42.101 -4.972  1.413  ? ? ? C7   RXR 8  
RXR C8   C8   C 0 1 N N N N N N 45.387 -8.011  -0.242 ? ? ? C8   RXR 9  
RXR C9   C9   C 0 1 N N N N N N 44.021 -8.646  1.775  ? ? ? C9   RXR 10 
RXR SD   SD   S 0 1 N N N N N N 40.960 -9.568  0.099  ? ? ? SD   RXR 11 
RXR CE   CE   C 0 1 N N N N N N 42.399 -9.076  -0.804 ? ? ? CE   RXR 12 
RXR C10  C10  C 0 1 N N N N N N 41.255 -6.282  -1.431 ? ? ? C10  RXR 13 
RXR S10  S10  S 0 1 N N N N N N 41.899 -5.847  -3.071 ? ? ? S10  RXR 14 
RXR H6   H6   H 0 1 N N N N N N 42.777 -3.852  -0.966 ? ? ? H6   RXR 15 
RXR H6A  H6A  H 0 1 N N N N N N 44.222 -3.715  0.091  ? ? ? H6A  RXR 16 
RXR H6B  H6B  H 0 1 N N N N N N 44.238 -4.838  -1.311 ? ? ? H6B  RXR 17 
RXR H7   H7   H 0 1 N N N N N N 41.309 -4.397  0.911  ? ? ? H7   RXR 18 
RXR H7A  H7A  H 0 1 N N N N N N 41.651 -5.809  1.968  ? ? ? H7A  RXR 19 
RXR H7B  H7B  H 0 1 N N N N N N 42.642 -4.317  2.112  ? ? ? H7B  RXR 20 
RXR H8   H8   H 0 1 N N N N N N 45.367 -9.073  -0.527 ? ? ? H8   RXR 21 
RXR H8A  H8A  H 0 1 N N N N N N 45.386 -7.388  -1.149 ? ? ? H8A  RXR 22 
RXR H8B  H8B  H 0 1 N N N N N N 46.295 -7.806  0.343  ? ? ? H8B  RXR 23 
RXR H9   H9   H 0 1 N N N N N N 44.041 -9.683  1.408  ? ? ? H9   RXR 24 
RXR H9A  H9A  H 0 1 N N N N N N 44.855 -8.488  2.475  ? ? ? H9A  RXR 25 
RXR H9B  H9B  H 0 1 N N N N N N 43.068 -8.459  2.291  ? ? ? H9B  RXR 26 
RXR HSD  HSD  H 0 1 N N N N N N 40.646 -10.688 -0.482 ? ? ? HSD  RXR 27 
RXR HE   HE   H 0 1 N N N N N N 42.136 -8.954  -1.865 ? ? ? HE   RXR 28 
RXR HEA  HEA  H 0 1 N N N N N N 43.174 -9.850  -0.700 ? ? ? HEA  RXR 29 
RXR H10  H10  H 0 1 N N N N N N 40.624 -7.178  -1.519 ? ? ? H10  RXR 30 
RXR H10A H10A H 0 0 N N N N N N 40.660 -5.442  -1.044 ? ? ? H10A RXR 31 
RXR HS10 HS10 H 0 0 N N N N N N 40.806 -5.640  -3.744 ? ? ? HS10 RXR 32 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
RXR N1  O1   SING N N 1  
RXR N1  C2   SING N N 2  
RXR N1  C5   SING N N 3  
RXR C2  C3   SING N N 4  
RXR C2  C8   SING N N 5  
RXR C2  C9   SING N N 6  
RXR C3  C4   DOUB N N 7  
RXR C3  CE   SING N N 8  
RXR C4  C5   SING N N 9  
RXR C4  C10  SING N N 10 
RXR C5  C6   SING N N 11 
RXR C5  C7   SING N N 12 
RXR C6  H6   SING N N 13 
RXR C6  H6A  SING N N 14 
RXR C6  H6B  SING N N 15 
RXR C7  H7   SING N N 16 
RXR C7  H7A  SING N N 17 
RXR C7  H7B  SING N N 18 
RXR C8  H8   SING N N 19 
RXR C8  H8A  SING N N 20 
RXR C8  H8B  SING N N 21 
RXR C9  H9   SING N N 22 
RXR C9  H9A  SING N N 23 
RXR C9  H9B  SING N N 24 
RXR SD  CE   SING N N 25 
RXR SD  HSD  SING N N 26 
RXR CE  HE   SING N N 27 
RXR CE  HEA  SING N N 28 
RXR C10 S10  SING N N 29 
RXR C10 H10  SING N N 30 
RXR C10 H10A SING N N 31 
RXR S10 HS10 SING N N 32 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
RXR SMILES           ACDLabs              12.01 "ON1C(C(=C(CS)C1(C)C)CS)(C)C"                                                 
RXR SMILES_CANONICAL CACTVS               3.370 "CC1(C)N([O])C(C)(C)C(=C1CS)CS"                                               
RXR SMILES           CACTVS               3.370 "CC1(C)N([O])C(C)(C)C(=C1CS)CS"                                               
RXR SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CC1(C(=C(C(N1[O])(C)C)CS)CS)C"                                               
RXR SMILES           "OpenEye OEToolkits" 1.7.0 "CC1(C(=C(C(N1[O])(C)C)CS)CS)C"                                               
RXR InChI            InChI                1.03  "InChI=1S/C10H19NOS2/c1-9(2)7(5-13)8(6-14)10(3,4)11(9)12/h12-14H,5-6H2,1-4H3" 
RXR InChIKey         InChI                1.03  PZEXYXPQVHSRCF-UHFFFAOYSA-N                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
RXR "SYSTEMATIC NAME" ACDLabs              12.01 "2,2,5,5-tetramethyl-3,4-bis(sulfanylmethyl)-2,5-dihydro-1H-pyrrol-1-ol"            
RXR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "[1-$l^{1}-oxidanyl-2,2,5,5-tetramethyl-4-(sulfanylmethyl)pyrrol-3-yl]methanethiol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
RXR "Create component"  2010-01-08 RCSB 
RXR "Modify descriptor" 2011-06-04 RCSB 
RXR "Modify synonyms"   2021-03-13 RCSB 
RXR "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      RXR 
_pdbx_chem_comp_synonyms.name         "3,4-bis(thiomethyl)-2,2,5,5-tetramethyl-1H-Pyrrol-1-yloxyl radical" 
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_pcm.pcm_id 
_pdbx_chem_comp_pcm.comp_id 
_pdbx_chem_comp_pcm.modified_residue_id 
_pdbx_chem_comp_pcm.type 
_pdbx_chem_comp_pcm.category 
_pdbx_chem_comp_pcm.position 
_pdbx_chem_comp_pcm.polypeptide_position 
_pdbx_chem_comp_pcm.comp_id_linking_atom 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 
1 RXR CYS None Crosslinker "Amino-acid side chain" "Any position" S10 SG ? ? 
2 RXR CYS None Crosslinker "Amino-acid side chain" "Any position" SD  SG ? ? 
# 
