data_SXR
# 
_chem_comp.id                                    SXR 
_chem_comp.name                                  "N~3~-{(2S)-4-[(dihydroxyphosphanyl)oxy]-2-hydroxy-3,3-dimethylbutanoyl}-N-{2-[(3-oxo-5-phenylpentyl)sulfanyl]ethyl}-beta-alaninamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H35 N2 O7 P S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-10-16 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        502.561 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     SXR 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2MVV 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
SXR P24  P24  P 0 1 N N N N N N 7.011  11.798 -3.966  8.692   2.838  -0.706 P24  SXR 1  
SXR O26  O26  O 0 1 N N N N N N 7.721  10.549 -4.586  7.227   3.490  -0.861 O26  SXR 2  
SXR O23  O23  O 0 1 N N N N N N 7.942  12.960 -3.586  9.442   3.919  0.223  O23  SXR 3  
SXR O27  O27  O 0 1 N N N N N N 5.954  12.384 -4.966  8.416   1.639  0.332  O27  SXR 4  
SXR C28  C28  C 0 1 N N N N N N 4.960  11.551 -5.721  8.047   0.321  -0.081 C28  SXR 5  
SXR C29  C29  C 0 1 N N N N N N 4.003  12.483 -6.471  7.863   -0.567 1.151  C29  SXR 6  
SXR C30  C30  C 0 1 N N N N N N 3.088  13.097 -5.426  9.175   -0.627 1.936  C30  SXR 7  
SXR C31  C31  C 0 1 N N N N N N 4.810  13.582 -7.152  6.763   0.016  2.040  C31  SXR 8  
SXR C32  C32  C 0 1 N N S N N N 3.153  11.685 -7.562  7.468   -1.977 0.709  C32  SXR 9  
SXR O33  O33  O 0 1 N N N N N N 4.008  11.203 -8.601  8.549   -2.570 -0.014 O33  SXR 10 
SXR C34  C34  C 0 1 N N N N N N 2.139  12.616 -8.235  6.252   -1.903 -0.178 C34  SXR 11 
SXR O35  O35  O 0 1 N N N N N N 0.999  12.782 -7.786  6.357   -2.107 -1.369 O35  SXR 12 
SXR N36  N36  N 0 1 N N N N N N 2.579  13.242 -9.307  5.048   -1.610 0.352  N36  SXR 13 
SXR C37  C37  C 0 1 N N N N N N 1.793  14.202 -10.086 3.849   -1.649 -0.488 C37  SXR 14 
SXR C38  C38  C 0 1 N N N N N N 2.373  15.621 -9.969  2.625   -1.278 0.352  C38  SXR 15 
SXR C39  C39  C 0 1 N N N N N N 2.437  16.149 -8.520  1.391   -1.318 -0.512 C39  SXR 16 
SXR O40  O40  O 0 1 N N N N N N 3.298  16.968 -8.170  1.482   -1.613 -1.685 O40  SXR 17 
SXR N41  N41  N 0 1 N N N N N N 1.548  15.622 -7.684  0.187   -1.025 0.018  N41  SXR 18 
SXR C42  C42  C 0 1 N N N N N N 1.444  15.926 -6.264  -1.012  -1.064 -0.823 C42  SXR 19 
SXR C43  C43  C 0 1 N N N N N N -0.005 15.951 -5.798  -2.236  -0.693 0.018  C43  SXR 20 
SXR S1   S1   S 0 1 N N N N N N -0.109 16.406 -4.134  -3.721  -0.741 -1.023 S1   SXR 21 
SXR C11  C11  C 0 1 Y N N N N N 0.040  8.196  -1.008  -12.054 -0.447 0.613  C11  SXR 22 
SXR C10  C10  C 0 1 Y N N N N N -0.591 6.947  -0.947  -13.363 -0.374 0.173  C10  SXR 23 
SXR C9   C9   C 0 1 Y N N N N N -1.447 6.548  -1.975  -13.859 0.816  -0.325 C9   SXR 24 
SXR C8   C8   C 0 1 Y N N N N N -1.677 7.392  -3.064  -13.047 1.934  -0.383 C8   SXR 25 
SXR C7   C7   C 0 1 Y N N N N N -1.049 8.640  -3.122  -11.738 1.861  0.057  C7   SXR 26 
SXR C6   C6   C 0 1 Y N N N N N -0.180 9.059  -2.093  -11.242 0.670  0.556  C6   SXR 27 
SXR C5   C5   C 0 1 N N N N N N 0.500  10.397 -2.149  -9.816  0.591  1.036  C5   SXR 28 
SXR C4   C4   C 0 1 N N N N N N -0.395 11.524 -2.638  -8.908  0.186  -0.127 C4   SXR 29 
SXR C3   C3   C 0 1 N N N N N N -0.058 12.890 -2.056  -7.482  0.107  0.354  C3   SXR 30 
SXR O3   O3   O 0 1 N N N N N N 0.616  12.983 -1.019  -7.219  0.349  1.508  O3   SXR 31 
SXR C2   C2   C 0 1 N N N N N N -0.554 14.142 -2.750  -6.384  -0.275 -0.605 C2   SXR 32 
SXR C1   C1   C 0 1 N N N N N N 0.535  14.997 -3.359  -5.043  -0.281 0.132  C1   SXR 33 
SXR H1   H1   H 0 1 N N N N N N 7.073  9.884  -4.789  6.620   2.967  -1.401 H1   SXR 34 
SXR H2   H2   H 0 1 N N N N N N 7.429  13.671 -3.220  9.692   4.730  -0.241 H2   SXR 35 
SXR H28A H28A H 0 0 N N N N N N 5.488  10.907 -6.440  7.113   0.365  -0.641 H28A SXR 36 
SXR H28B H28B H 0 0 N N N N N N 4.391  10.926 -5.017  8.831   -0.094 -0.715 H28B SXR 37 
SXR H30A H30A H 0 0 N N N N N N 2.377  13.779 -5.916  9.484   0.382  2.207  H30A SXR 38 
SXR H30B H30B H 0 0 N N N N N N 2.534  12.299 -4.909  9.030   -1.217 2.841  H30B SXR 39 
SXR H30C H30C H 0 0 N N N N N N 3.690  13.658 -4.696  9.946   -1.090 1.321  H30C SXR 40 
SXR H31A H31A H 0 0 N N N N N N 4.129  14.256 -7.693  5.864   0.178  1.446  H31A SXR 41 
SXR H31B H31B H 0 0 N N N N N N 5.365  14.153 -6.393  6.543   -0.680 2.849  H31B SXR 42 
SXR H31C H31C H 0 0 N N N N N N 5.519  13.130 -7.861  7.098   0.965  2.458  H31C SXR 43 
SXR H32A H32A H 0 0 N N N N N N 2.625  10.858 -7.066  7.242   -2.583 1.586  H32A SXR 44 
SXR H33A H33A H 0 0 N N N N N N 3.491  10.731 -9.243  8.805   -2.083 -0.809 H33A SXR 45 
SXR H36A H36A H 0 0 N N N N N N 3.512  13.049 -9.610  4.976   -1.374 1.290  H36A SXR 46 
SXR H37A H37A H 0 0 N N N N N N 1.800  13.898 -11.143 3.956   -0.937 -1.307 H37A SXR 47 
SXR H37B H37B H 0 0 N N N N N N 0.758  14.205 -9.712  3.721   -2.653 -0.894 H37B SXR 48 
SXR H38A H38A H 0 0 N N N N N N 3.393  15.614 -10.381 2.518   -1.990 1.171  H38A SXR 49 
SXR H38B H38B H 0 0 N N N N N N 1.743  16.303 -10.559 2.753   -0.275 0.757  H38B SXR 50 
SXR H41A H41A H 0 0 N N N N N N 0.897  14.963 -8.061  0.115   -0.789 0.956  H41A SXR 51 
SXR H42A H42A H 0 0 N N N N N N 1.988  15.158 -5.694  -0.905  -0.352 -1.641 H42A SXR 52 
SXR H42B H42B H 0 0 N N N N N N 1.896  16.911 -6.076  -1.140  -2.067 -1.228 H42B SXR 53 
SXR H43A H43A H 0 0 N N N N N N -0.566 16.676 -6.406  -2.343  -1.405 0.837  H43A SXR 54 
SXR H43B H43B H 0 0 N N N N N N -0.442 14.950 -5.926  -2.108  0.311  0.423  H43B SXR 55 
SXR H11A H11A H 0 0 N N N N N N 0.703  8.498  -0.211  -11.668 -1.375 1.007  H11A SXR 56 
SXR H10A H10A H 0 0 N N N N N N -0.415 6.293  -0.105  -13.997 -1.247 0.218  H10A SXR 57 
SXR H9A  H9A  H 0 1 N N N N N N -1.933 5.584  -1.928  -14.881 0.873  -0.670 H9A  SXR 58 
SXR H8A  H8A  H 0 1 N N N N N N -2.338 7.081  -3.859  -13.434 2.863  -0.772 H8A  SXR 59 
SXR H7A  H7A  H 0 1 N N N N N N -1.231 9.291  -3.964  -11.104 2.733  0.012  H7A  SXR 60 
SXR H5A  H5A  H 0 1 N N N N N N 0.852  10.649 -1.138  -9.506  1.564  1.417  H5A  SXR 61 
SXR H5B  H5B  H 0 1 N N N N N N 1.361  10.319 -2.829  -9.741  -0.151 1.831  H5B  SXR 62 
SXR H4A  H4A  H 0 1 N N N N N N -0.306 11.584 -3.733  -9.217  -0.787 -0.508 H4A  SXR 63 
SXR H4B  H4B  H 0 1 N N N N N N -1.433 11.281 -2.368  -8.983  0.928  -0.921 H4B  SXR 64 
SXR H2A  H2A  H 0 1 N N N N N N -1.242 13.840 -3.553  -6.582  -1.269 -1.007 H2A  SXR 65 
SXR H2B  H2B  H 0 1 N N N N N N -1.097 14.751 -2.012  -6.347  0.447  -1.421 H2B  SXR 66 
SXR H1A  H1A  H 0 1 N N N N N N 1.082  14.400 -4.104  -5.080  -1.003 0.948  H1A  SXR 67 
SXR H1B  H1B  H 0 1 N N N N N N 1.226  15.313 -2.564  -4.845  0.712  0.534  H1B  SXR 68 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
SXR P24 O26  SING N N 1  
SXR P24 O23  SING N N 2  
SXR P24 O27  SING N N 3  
SXR O27 C28  SING N N 4  
SXR C28 C29  SING N N 5  
SXR C29 C30  SING N N 6  
SXR C29 C31  SING N N 7  
SXR C29 C32  SING N N 8  
SXR C32 O33  SING N N 9  
SXR C32 C34  SING N N 10 
SXR C34 O35  DOUB N N 11 
SXR C34 N36  SING N N 12 
SXR N36 C37  SING N N 13 
SXR C37 C38  SING N N 14 
SXR C38 C39  SING N N 15 
SXR C39 O40  DOUB N N 16 
SXR C39 N41  SING N N 17 
SXR N41 C42  SING N N 18 
SXR C42 C43  SING N N 19 
SXR C43 S1   SING N N 20 
SXR S1  C1   SING N N 21 
SXR C11 C10  DOUB Y N 22 
SXR C11 C6   SING Y N 23 
SXR C10 C9   SING Y N 24 
SXR C9  C8   DOUB Y N 25 
SXR C8  C7   SING Y N 26 
SXR C7  C6   DOUB Y N 27 
SXR C6  C5   SING N N 28 
SXR C5  C4   SING N N 29 
SXR C4  C3   SING N N 30 
SXR C3  O3   DOUB N N 31 
SXR C3  C2   SING N N 32 
SXR C2  C1   SING N N 33 
SXR O26 H1   SING N N 34 
SXR O23 H2   SING N N 35 
SXR C28 H28A SING N N 36 
SXR C28 H28B SING N N 37 
SXR C30 H30A SING N N 38 
SXR C30 H30B SING N N 39 
SXR C30 H30C SING N N 40 
SXR C31 H31A SING N N 41 
SXR C31 H31B SING N N 42 
SXR C31 H31C SING N N 43 
SXR C32 H32A SING N N 44 
SXR O33 H33A SING N N 45 
SXR N36 H36A SING N N 46 
SXR C37 H37A SING N N 47 
SXR C37 H37B SING N N 48 
SXR C38 H38A SING N N 49 
SXR C38 H38B SING N N 50 
SXR N41 H41A SING N N 51 
SXR C42 H42A SING N N 52 
SXR C42 H42B SING N N 53 
SXR C43 H43A SING N N 54 
SXR C43 H43B SING N N 55 
SXR C11 H11A SING N N 56 
SXR C10 H10A SING N N 57 
SXR C9  H9A  SING N N 58 
SXR C8  H8A  SING N N 59 
SXR C7  H7A  SING N N 60 
SXR C5  H5A  SING N N 61 
SXR C5  H5B  SING N N 62 
SXR C4  H4A  SING N N 63 
SXR C4  H4B  SING N N 64 
SXR C2  H2A  SING N N 65 
SXR C2  H2B  SING N N 66 
SXR C1  H1A  SING N N 67 
SXR C1  H1B  SING N N 68 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
SXR SMILES           ACDLabs              12.01 "O=C(NCCC(=O)NCCSCCC(=O)CCc1ccccc1)C(O)C(C)(C)COP(O)O"                                                                                                                             
SXR InChI            InChI                1.03  "InChI=1S/C22H35N2O7PS/c1-22(2,16-31-32(29)30)20(27)21(28)24-12-10-19(26)23-13-15-33-14-11-18(25)9-8-17-6-4-3-5-7-17/h3-7,20,27,29-30H,8-16H2,1-2H3,(H,23,26)(H,24,28)/t20-/m1/s1" 
SXR InChIKey         InChI                1.03  FUUCQARVEOTYOO-HXUWFJFHSA-N                                                                                                                                                        
SXR SMILES_CANONICAL CACTVS               3.385 "CC(C)(COP(O)O)[C@H](O)C(=O)NCCC(=O)NCCSCCC(=O)CCc1ccccc1"                                                                                                                         
SXR SMILES           CACTVS               3.385 "CC(C)(COP(O)O)[CH](O)C(=O)NCCC(=O)NCCSCCC(=O)CCc1ccccc1"                                                                                                                          
SXR SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(C)(COP(O)O)[C@@H](C(=O)NCCC(=O)NCCSCCC(=O)CCc1ccccc1)O"                                                                                                                        
SXR SMILES           "OpenEye OEToolkits" 1.7.6 "CC(C)(COP(O)O)C(C(=O)NCCC(=O)NCCSCCC(=O)CCc1ccccc1)O"                                                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
SXR "SYSTEMATIC NAME" ACDLabs              12.01 "N~3~-{(2S)-4-[(dihydroxyphosphanyl)oxy]-2-hydroxy-3,3-dimethylbutanoyl}-N-{2-[(3-oxo-5-phenylpentyl)sulfanyl]ethyl}-beta-alaninamide"                                
SXR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(3S)-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-4-[[3-oxidanylidene-3-[2-(3-oxidanylidene-5-phenyl-pentyl)sulfanylethylamino]propyl]amino]butyl] dihydrogen phosphite" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
SXR "Create component" 2014-10-16 RCSB 
SXR "Initial release"  2015-10-21 RCSB 
SXR "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            SXR 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               P24 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
