data_24S
#

_chem_comp.id                                   24S
_chem_comp.name                                 "N-({(2Z)-2-[(2-nitrophenyl)methylidene]hydrazino}carbonothioyl)-beta-D-glucopyranosylamine"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C14 H18 N4 O7 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;2-nitrobenzaldehyde-4-(beta-D-glucopyranosyl) thiosemicarbazone;
N-({(2Z)-2-[(2-nitrophenyl)methylidene]hydrazino}carbonothioyl)-beta-D-glucosylamine;
N-({(2Z)-2-[(2-nitrophenyl)methylidene]hydrazino}carbonothioyl)-D-glucosylamine;
N-({(2Z)-2-[(2-nitrophenyl)methylidene]hydrazino}carbonothioyl)-glucosylamine
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2010-05-03
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       386.380
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    24S
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3MSC
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  24S  "2-nitrobenzaldehyde-4-(beta-D-glucopyranosyl) thiosemicarbazone"                       PDB  ?  
2  24S  "N-({(2Z)-2-[(2-nitrophenyl)methylidene]hydrazino}carbonothioyl)-beta-D-glucosylamine"  PDB  ?  
3  24S  "N-({(2Z)-2-[(2-nitrophenyl)methylidene]hydrazino}carbonothioyl)-D-glucosylamine"       PDB  ?  
4  24S  "N-({(2Z)-2-[(2-nitrophenyl)methylidene]hydrazino}carbonothioyl)-glucosylamine"         PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
24S  C1    C1    C   0  1  N  N  R  18.958  13.190  58.447   2.388  -0.292   0.332  C1    24S   1  
24S  C2    C2    C   0  1  N  N  R  17.644  13.525  59.178   3.131  -1.615   0.130  C2    24S   2  
24S  O2    O2    O   0  1  N  N  N  16.896  14.485  58.417   2.665  -2.574   1.081  O2    24S   3  
24S  C3    C3    C   0  1  N  N  S  17.980  14.120  60.558   4.632  -1.384   0.330  C3    24S   4  
24S  O3    O3    O   0  1  N  N  N  16.783  14.397  61.288   5.341  -2.598   0.072  O3    24S   5  
24S  C4    C4    C   0  1  N  N  S  18.916  13.196  61.361   5.104  -0.298  -0.641  C4    24S   6  
24S  O4    O4    O   0  1  N  N  N  19.345  13.869  62.561   6.488  -0.023  -0.414  O4    24S   7  
24S  C5    C5    C   0  1  N  N  R  20.139  12.784  60.508   4.285   0.974  -0.410  C5    24S   8  
24S  O5    O5    O   0  1  N  N  N  19.705  12.225  59.229   2.897   0.683  -0.581  O5    24S   9  
24S  C6    C6    C   0  1  N  N  N  21.019  11.764  61.248   4.709   2.045  -1.417  C6    24S  10  
24S  O6    O6    O   0  1  N  N  N  21.806  11.023  60.308   4.029   3.268  -1.127  O6    24S  11  
24S  NAL   NAL   N   0  1  N  N  N  18.745  12.649  57.091   0.958  -0.492   0.086  NAL   24S  12  
24S  CAM   CAM   C   0  1  N  N  N  18.649  13.432  56.015   0.048   0.189   0.810  CAM   24S  13  
24S  NAN   NAN   N   0  1  N  N  N  18.467  12.865  54.830  -1.268   0.005   0.584  NAN   24S  14  
24S  SAO   SAO   S   0  1  N  N  N  18.755  15.162  56.118   0.563   1.289   2.017  SAO   24S  15  
24S  NAP   NAP   N   0  1  N  N  N  18.370  13.587  53.843  -1.689  -0.814  -0.472  NAP   24S  16  
24S  CAQ   CAQ   C   0  1  N  N  N  18.180  13.169  52.603  -2.948  -0.881  -0.778  CAQ   24S  17  
24S  CAR   CAR   C   0  1  Y  N  N  18.042  11.873  52.098  -3.864   0.204  -0.377  CAR   24S  18  
24S  CAS   CAS   C   0  1  Y  N  N  17.362  10.808  52.730  -5.235  -0.040  -0.265  CAS   24S  19  
24S  CAT   CAT   C   0  1  Y  N  N  17.288   9.575  52.073  -6.085   0.979   0.111  CAT   24S  20  
24S  CAU   CAU   C   0  1  Y  N  N  17.855   9.387  50.812  -5.582   2.241   0.377  CAU   24S  21  
24S  CAV   CAV   C   0  1  Y  N  N  18.508  10.445  50.185  -4.226   2.489   0.268  CAV   24S  22  
24S  CAW   CAW   C   0  1  Y  N  N  18.593  11.676  50.828  -3.363   1.478  -0.102  CAW   24S  23  
24S  NAX   NAX   N   1  1  N  N  N  16.790  10.880  53.943  -5.774  -1.389  -0.550  NAX   24S  24  
24S  OAY   OAY   O   0  1  N  N  N  16.883   9.757  54.815  -5.014  -2.314  -0.776  OAY   24S  25  
24S  OAZ   OAZ   O  -1  1  N  N  N  16.087  12.035  54.408  -6.978  -1.574  -0.558  OAZ   24S  26  
24S  H1    H1    H   0  1  N  N  N  19.515  14.132  58.337   2.536   0.056   1.355  H1    24S  27  
24S  H2    H2    H   0  1  N  N  N  17.044  12.611  59.296   2.950  -1.984  -0.879  H2    24S  28  
24S  HO2   HO2   H   0  1  N  Y  N  16.087  14.689  58.871   1.719  -2.766   1.015  HO2   24S  29  
24S  H3    H3    H   0  1  N  N  N  18.516  15.067  60.396   4.819  -1.064   1.355  H3    24S  30  
24S  HO3   HO3   H   0  1  N  Y  N  17.006  14.763  62.136   5.087  -3.332   0.647  HO3   24S  31  
24S  H4    H4    H   0  1  N  N  N  18.367  12.283  61.635   4.964  -0.641  -1.667  H4    24S  32  
24S  HO4   HO4   H   0  1  N  Y  N  19.922  13.299  63.055   7.067  -0.788  -0.539  HO4   24S  33  
24S  H5    H5    H   0  1  N  N  N  20.737  13.689  60.325   4.458   1.339   0.603  H5    24S  34  
24S  H61   H6    H   0  1  N  N  N  21.687  12.296  61.942   5.786   2.203  -1.348  H61   24S  35  
24S  H62   H6A   H   0  1  N  N  N  20.377  11.071  61.811   4.454   1.717  -2.425  H62   24S  36  
24S  HO6   HO6   H   0  1  N  Y  N  22.347  10.395  60.772   4.251   3.993  -1.728  HO6   24S  37  
24S  HNAL  HNAL  H   0  0  N  N  N  18.670  11.659  56.974   0.666  -1.115  -0.597  HNAL  24S  38  
24S  HNAN  HNAN  H   0  0  N  N  N  18.410  11.870  54.743  -1.923   0.439   1.152  HNAN  24S  39  
24S  HAQ   HAQ   H   0  1  N  N  N  18.122  13.953  51.863  -3.326  -1.731  -1.327  HAQ   24S  40  
24S  HAT   HAT   H   0  1  N  N  N  16.781   8.751  52.552  -7.145   0.792   0.197  HAT   24S  41  
24S  HAU   HAU   H   0  1  N  N  N  17.788   8.426  50.325  -6.253   3.035   0.670  HAU   24S  42  
24S  HAV   HAV   H   0  1  N  N  N  18.945  10.311  49.207  -3.841   3.477   0.476  HAV   24S  43  
24S  HAW   HAW   H   0  1  N  N  N  19.095  12.496  50.336  -2.304   1.674  -0.187  HAW   24S  44  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
24S  C1   C2    SING  N  N   1  
24S  C1   O5    SING  N  N   2  
24S  C2   C3    SING  N  N   3  
24S  O2   C2    SING  N  N   4  
24S  C3   O3    SING  N  N   5  
24S  C3   C4    SING  N  N   6  
24S  C4   O4    SING  N  N   7  
24S  C5   C4    SING  N  N   8  
24S  C5   C6    SING  N  N   9  
24S  O5   C5    SING  N  N  10  
24S  O6   C6    SING  N  N  11  
24S  NAL  C1    SING  N  N  12  
24S  CAM  NAL   SING  N  N  13  
24S  CAM  SAO   DOUB  N  N  14  
24S  NAN  CAM   SING  N  N  15  
24S  NAP  NAN   SING  N  N  16  
24S  CAQ  NAP   DOUB  N  N  17  
24S  CAR  CAQ   SING  N  N  18  
24S  CAR  CAS   SING  Y  N  19  
24S  CAS  NAX   SING  N  N  20  
24S  CAT  CAS   DOUB  Y  N  21  
24S  CAU  CAT   SING  Y  N  22  
24S  CAV  CAU   DOUB  Y  N  23  
24S  CAV  CAW   SING  Y  N  24  
24S  CAW  CAR   DOUB  Y  N  25  
24S  NAX  OAZ   SING  N  N  26  
24S  NAX  OAY   DOUB  N  N  27  
24S  C1   H1    SING  N  N  28  
24S  C2   H2    SING  N  N  29  
24S  O2   HO2   SING  N  Z  30  
24S  C3   H3    SING  N  N  31  
24S  O3   HO3   SING  N  N  32  
24S  C4   H4    SING  N  N  33  
24S  O4   HO4   SING  N  N  34  
24S  C5   H5    SING  N  N  35  
24S  C6   H61   SING  N  N  36  
24S  C6   H62   SING  N  N  37  
24S  O6   HO6   SING  N  N  38  
24S  NAL  HNAL  SING  N  N  39  
24S  NAN  HNAN  SING  N  N  40  
24S  CAQ  HAQ   SING  N  N  41  
24S  CAT  HAT   SING  N  N  42  
24S  CAU  HAU   SING  N  N  43  
24S  CAV  HAV   SING  N  N  44  
24S  CAW  HAW   SING  N  N  45  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
24S  SMILES            ACDLabs               12.01  "S=C(NC1OC(C(O)C(O)C1O)CO)N/N=C\c2ccccc2[N+]([O-])=O"  
24S  SMILES_CANONICAL  CACTVS                3.370  "OC[C@H]1O[C@@H](NC(=S)N\N=C/c2ccccc2[N+]([O-])=O)[C@H](O)[C@@H](O)[C@@H]1O"  
24S  SMILES            CACTVS                3.370  "OC[CH]1O[CH](NC(=S)NN=Cc2ccccc2[N+]([O-])=O)[CH](O)[CH](O)[CH]1O"  
24S  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "c1ccc(c(c1)/C=N\NC(=S)N[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)[N+](=O)[O-]"  
24S  SMILES            "OpenEye OEToolkits"  1.7.0  "c1ccc(c(c1)C=NNC(=S)NC2C(C(C(C(O2)CO)O)O)O)[N+](=O)[O-]"  
24S  InChI             InChI                 1.03   "InChI=1S/C14H18N4O7S/c19-6-9-10(20)11(21)12(22)13(25-9)16-14(26)17-15-5-7-3-1-2-4-8(7)18(23)24/h1-5,9-13,19-22H,6H2,(H2,16,17,26)/b15-5-/t9-,10-,11+,12-,13-/m1/s1"  
24S  InChIKey          InChI                 1.03   HIBBBAGNJNCOKR-ARDSGTFASA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
24S  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-{[(2Z)-2-(2-nitrobenzylidene)hydrazinyl]carbothioyl}-beta-D-glucopyranosylamine"  
24S  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.0  "1-[(Z)-(2-nitrophenyl)methylideneamino]-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]thiourea"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
24S  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
24S  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
24S  "CARBOHYDRATE ANOMER"                  beta      PDB  ?  
24S  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
24S  "Create component"          2010-05-03  RCSB  
24S  "Modify aromatic_flag"      2011-06-04  RCSB  
24S  "Modify descriptor"         2011-06-04  RCSB  
24S  "Other modification"        2020-07-03  RCSB  
24S  "Modify synonyms"           2020-07-17  RCSB  
24S  "Modify internal type"      2020-07-17  RCSB  
24S  "Modify linking type"       2020-07-17  RCSB  
24S  "Modify atom id"            2020-07-17  RCSB  
24S  "Modify component atom id"  2020-07-17  RCSB  
24S  "Modify leaving atom flag"  2020-07-17  RCSB  
##
