data_78S
# 
_chem_comp.id                                    78S 
_chem_comp.name                                  "(2R)-3-dimethoxyphosphoryloxy-2-[(2Z,6E)-3,7,11-trimethyldodeca-2,6,10-trienoxy]propanoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H35 O7 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-09-23 
_chem_comp.pdbx_modified_date                    2017-09-15 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        418.461 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     78S 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5GWV 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
78S CAC C1  C 0 1 N N N 36.796 19.819 19.598 -7.751  -1.067 1.760  CAC 78S 1  
78S CAW C2  C 0 1 N N N 37.289 19.760 18.151 -8.214  -1.686 0.466  CAW 78S 2  
78S CAD C3  C 0 1 N N N 38.759 19.451 17.862 -9.265  -2.766 0.482  CAD 78S 3  
78S CAJ C4  C 0 1 N N N 36.346 20.135 17.006 -7.702  -1.286 -0.671 CAJ 78S 4  
78S CAM C5  C 0 1 N N N 34.945 20.576 17.437 -6.651  -0.207 -0.687 CAM 78S 5  
78S CAP C6  C 0 1 N N N 34.084 19.364 17.795 -5.411  -0.714 -1.426 CAP 78S 6  
78S CAX C7  C 0 1 N N N 32.894 19.314 16.836 -4.359  0.366  -1.441 CAX 78S 7  
78S CAE C8  C 0 1 N N N 33.146 19.077 15.347 -4.385  1.428  -2.510 CAE 78S 8  
78S CAK C9  C 0 1 N N N 31.473 19.555 17.351 -3.423  0.381  -0.525 CAK 78S 9  
78S CAN C10 C 0 1 N N N 30.370 19.463 16.292 -2.303  1.387  -0.609 CAN 78S 10 
78S CAQ C11 C 0 1 N N N 30.320 20.716 15.413 -2.244  2.194  0.690  CAQ 78S 11 
78S CAY C12 C 0 1 N N N 30.131 21.969 16.271 -1.125  3.199  0.606  CAY 78S 12 
78S CAF C13 C 0 1 N N N 29.130 21.984 17.427 -1.370  4.549  -0.018 CAF 78S 13 
78S CAL C14 C 0 1 N N N 30.951 23.228 15.987 0.061   2.900  1.076  CAL 78S 14 
78S CAO C15 C 0 1 N N N 31.932 23.126 14.818 0.343   1.507  1.578  CAO 78S 15 
78S OAU O1  O 0 1 N N N 32.327 24.447 14.440 1.592   1.055  1.051  OAU 78S 16 
78S CBA C16 C 0 1 N N R 31.237 25.084 13.769 1.956   -0.262 1.469  CBA 78S 17 
78S CAZ C17 C 0 1 N N N 30.601 26.130 14.689 1.412   -1.268 0.487  CAZ 78S 18 
78S OAI O2  O 0 1 N N N 29.382 25.998 14.932 0.856   -0.892 -0.518 OAI 78S 19 
78S OAG O3  O 0 1 N N N 31.369 26.960 15.223 1.545   -2.582 0.729  OAG 78S 20 
78S CAR C18 C 0 1 N N N 31.760 25.735 12.487 3.481   -0.377 1.524  CAR 78S 21 
78S OAV O4  O 0 1 N N N 31.232 27.057 12.356 4.017   -0.236 0.207  OAV 78S 22 
78S PBB P1  P 0 1 N N N 30.307 27.446 11.095 5.594   -0.304 -0.109 PBB 78S 23 
78S OAT O5  O 0 1 N N N 30.100 29.043 11.179 5.844   0.024  -1.666 OAT 78S 24 
78S CAB C19 C 0 1 N N N 30.017 29.702 12.446 7.149   0.145  -2.236 CAB 78S 25 
78S OAH O6  O 0 1 N N N 29.017 26.717 11.090 6.308   0.689  0.725  OAH 78S 26 
78S OAS O7  O 0 1 N N N 31.204 27.167 9.785  6.146   -1.779 0.224  OAS 78S 27 
78S CAA C20 C 0 1 N N N 32.632 27.169 9.864  5.654   -2.957 -0.419 CAA 78S 28 
78S H1  H1  H 0 1 N N N 37.608 19.517 20.275 -8.285  -1.523 2.593  H1  78S 29 
78S H2  H2  H 0 1 N N N 36.483 20.846 19.837 -6.680  -1.233 1.880  H2  78S 30 
78S H3  H3  H 0 1 N N N 35.942 19.137 19.722 -7.952  0.004  1.742  H3  78S 31 
78S H4  H4  H 0 1 N N N 39.274 19.204 18.802 -10.253 -2.311 0.406  H4  78S 32 
78S H5  H5  H 0 1 N N N 38.825 18.596 17.173 -9.109  -3.437 -0.362 H5  78S 33 
78S H6  H6  H 0 1 N N N 39.235 20.330 17.403 -9.194  -3.329 1.412  H6  78S 34 
78S H7  H7  H 0 1 N N N 36.647 20.092 15.970 -8.034  -1.730 -1.598 H7  78S 35 
78S H8  H8  H 0 1 N N N 35.027 21.233 18.316 -7.042  0.674  -1.195 H8  78S 36 
78S H9  H9  H 0 1 N N N 34.469 21.126 16.611 -6.382  0.054  0.337  H9  78S 37 
78S H10 H10 H 0 1 N N N 33.723 19.458 18.830 -5.019  -1.595 -0.917 H10 78S 38 
78S H11 H11 H 0 1 N N N 34.679 18.444 17.696 -5.679  -0.974 -2.450 H11 78S 39 
78S H12 H12 H 0 1 N N N 34.222 18.925 15.176 -3.497  1.336  -3.135 H12 78S 40 
78S H13 H13 H 0 1 N N N 32.593 18.184 15.019 -5.276  1.303  -3.125 H13 78S 41 
78S H14 H14 H 0 1 N N N 32.804 19.951 14.774 -4.400  2.413  -2.044 H14 78S 42 
78S H15 H15 H 0 1 N N N 31.263 19.774 18.387 -3.453  -0.327 0.290  H15 78S 43 
78S H16 H16 H 0 1 N N N 29.400 19.344 16.797 -1.357  0.866  -0.756 H16 78S 44 
78S H17 H17 H 0 1 N N N 30.561 18.588 15.654 -2.481  2.060  -1.447 H17 78S 45 
78S H18 H18 H 0 1 N N N 29.479 20.630 14.709 -3.190  2.714  0.837  H18 78S 46 
78S H19 H19 H 0 1 N N N 31.262 20.801 14.851 -2.066  1.520  1.528  H19 78S 47 
78S H20 H20 H 0 1 N N N 29.146 22.970 17.914 -1.697  5.250  0.750  H20 78S 48 
78S H21 H21 H 0 1 N N N 28.120 21.782 17.040 -0.447  4.912  -0.472 H21 78S 49 
78S H22 H22 H 0 1 N N N 29.404 21.210 18.159 -2.141  4.461  -0.783 H22 78S 50 
78S H23 H23 H 0 1 N N N 30.845 24.129 16.573 0.836   3.651  1.103  H23 78S 51 
78S H24 H24 H 0 1 N N N 31.445 22.627 13.967 0.389   1.516  2.667  H24 78S 52 
78S H25 H25 H 0 1 N N N 32.816 22.548 15.125 -0.452  0.836  1.253  H25 78S 53 
78S H26 H26 H 0 1 N N N 30.473 24.340 13.500 1.541   -0.458 2.457  H26 78S 54 
78S H27 H27 H 0 1 N N N 30.884 27.484 15.850 1.180   -3.189 0.071  H27 78S 55 
78S H28 H28 H 0 1 N N N 31.450 25.132 11.621 3.881   0.408  2.165  H28 78S 56 
78S H29 H29 H 0 1 N N N 32.858 25.784 12.526 3.757   -1.352 1.926  H29 78S 57 
78S H30 H30 H 0 1 N N N 29.877 30.782 12.290 7.690   0.950  -1.738 H30 78S 58 
78S H31 H31 H 0 1 N N N 29.165 29.300 13.013 7.691   -0.792 -2.105 H31 78S 59 
78S H32 H32 H 0 1 N N N 30.946 29.531 13.010 7.062   0.369  -3.299 H32 78S 60 
78S H33 H33 H 0 1 N N N 33.055 26.960 8.870  6.178   -3.829 -0.029 H33 78S 61 
78S H34 H34 H 0 1 N N N 32.979 28.154 10.210 4.586   -3.058 -0.226 H34 78S 62 
78S H35 H35 H 0 1 N N N 32.961 26.395 10.573 5.823   -2.882 -1.493 H35 78S 63 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
78S OAS CAA SING N N 1  
78S OAS PBB SING N N 2  
78S OAH PBB DOUB N N 3  
78S PBB OAT SING N N 4  
78S PBB OAV SING N N 5  
78S OAT CAB SING N N 6  
78S OAV CAR SING N N 7  
78S CAR CBA SING N N 8  
78S CBA OAU SING N N 9  
78S CBA CAZ SING N N 10 
78S OAU CAO SING N N 11 
78S CAZ OAI DOUB N N 12 
78S CAZ OAG SING N N 13 
78S CAO CAL SING N N 14 
78S CAE CAX SING N N 15 
78S CAQ CAY SING N N 16 
78S CAQ CAN SING N N 17 
78S CAL CAY DOUB N Z 18 
78S CAY CAF SING N N 19 
78S CAN CAK SING N N 20 
78S CAX CAK DOUB N E 21 
78S CAX CAP SING N N 22 
78S CAJ CAM SING N N 23 
78S CAJ CAW DOUB N N 24 
78S CAM CAP SING N N 25 
78S CAD CAW SING N N 26 
78S CAW CAC SING N N 27 
78S CAC H1  SING N N 28 
78S CAC H2  SING N N 29 
78S CAC H3  SING N N 30 
78S CAD H4  SING N N 31 
78S CAD H5  SING N N 32 
78S CAD H6  SING N N 33 
78S CAJ H7  SING N N 34 
78S CAM H8  SING N N 35 
78S CAM H9  SING N N 36 
78S CAP H10 SING N N 37 
78S CAP H11 SING N N 38 
78S CAE H12 SING N N 39 
78S CAE H13 SING N N 40 
78S CAE H14 SING N N 41 
78S CAK H15 SING N N 42 
78S CAN H16 SING N N 43 
78S CAN H17 SING N N 44 
78S CAQ H18 SING N N 45 
78S CAQ H19 SING N N 46 
78S CAF H20 SING N N 47 
78S CAF H21 SING N N 48 
78S CAF H22 SING N N 49 
78S CAL H23 SING N N 50 
78S CAO H24 SING N N 51 
78S CAO H25 SING N N 52 
78S CBA H26 SING N N 53 
78S OAG H27 SING N N 54 
78S CAR H28 SING N N 55 
78S CAR H29 SING N N 56 
78S CAB H30 SING N N 57 
78S CAB H31 SING N N 58 
78S CAB H32 SING N N 59 
78S CAA H33 SING N N 60 
78S CAA H34 SING N N 61 
78S CAA H35 SING N N 62 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
78S InChI            InChI                1.03  "InChI=1S/C20H35O7P/c1-16(2)9-7-10-17(3)11-8-12-18(4)13-14-26-19(20(21)22)15-27-28(23,24-5)25-6/h9,11,13,19H,7-8,10,12,14-15H2,1-6H3,(H,21,22)/b17-11+,18-13-/t19-/m1/s1" 
78S InChIKey         InChI                1.03  SUINKCORNPNGEZ-MQDURZRJSA-N                                                                                                                                               
78S SMILES_CANONICAL CACTVS               3.385 "CO[P](=O)(OC)OC[C@@H](OC\C=C(C)/CC/C=C(C)/CCC=C(C)C)C(O)=O"                                                                                                              
78S SMILES           CACTVS               3.385 "CO[P](=O)(OC)OC[CH](OCC=C(C)CCC=C(C)CCC=C(C)C)C(O)=O"                                                                                                                    
78S SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC(=CCC/C(=C/CC/C(=C\CO[C@H](COP(=O)(OC)OC)C(=O)O)/C)/C)C"                                                                                                               
78S SMILES           "OpenEye OEToolkits" 2.0.6 "CC(=CCCC(=CCCC(=CCOC(COP(=O)(OC)OC)C(=O)O)C)C)C"                                                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
78S "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{R})-3-dimethoxyphosphoryloxy-2-[(2~{Z},6~{E})-3,7,11-trimethyldodeca-2,6,10-trienoxy]propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
78S "Create component" 2016-09-23 PDBJ 
78S "Initial release"  2017-09-20 RCSB 
# 
