data_C6S
# 
_chem_comp.id                                    C6S 
_chem_comp.name                                  "(3R)-3-(cyclohexylcarbonylamino)-2-oxidanyl-3,4-dihydro-1,2-benzoxaborinine-8-carboxylic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C16 H20 B N O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-12-08 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        317.145 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     C6S 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5FQ9 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
C6S O01  O01  O 0 1 N N N N N N -11.533 -20.242 17.579 0.120  1.877  -1.406 O01  C6S 1  
C6S B02  B02  B 0 1 N N N N N N -11.420 -20.240 16.132 0.697  0.952  -0.496 B02  C6S 2  
C6S O03  O03  O 0 1 N N N N N N -12.563 -19.560 15.621 2.072  1.013  -0.138 O03  C6S 3  
C6S C04  C04  C 0 1 Y N N N N N -13.654 -20.421 15.199 2.688  -0.192 -0.032 C04  C6S 4  
C6S C05  C05  C 0 1 Y N N N N N -13.370 -21.552 14.437 2.021  -1.400 -0.038 C05  C6S 5  
C6S C06  C06  C 0 1 N N N N N N -11.884 -21.807 14.105 0.526  -1.522 -0.188 C06  C6S 6  
C6S C07  C07  C 0 1 N N R N N N -11.130 -21.665 15.391 -0.157 -0.195 0.177  C07  C6S 7  
C6S N08  N08  N 0 1 N N N N N N -11.620 -22.722 16.254 -1.525 -0.173 -0.346 N08  C6S 8  
C6S C09  C09  C 0 1 N N N N N N -11.143 -24.072 16.079 -2.529 0.310  0.413  C09  C6S 9  
C6S O10  O10  O 0 1 N N N N N N -10.297 -24.311 15.222 -2.299 0.728  1.528  O10  C6S 10 
C6S C11  C11  C 0 1 N N N N N N -11.729 -25.155 17.030 -3.937 0.333  -0.125 C11  C6S 11 
C6S C12  C12  C 0 1 N N N N N N -10.841 -26.389 17.054 -4.875 0.926  0.928  C12  C6S 12 
C6S C13  C13  C 0 1 N N N N N N -11.437 -27.443 17.969 -6.304 0.949  0.382  C13  C6S 13 
C6S C14  C14  C 0 1 N N N N N N -12.858 -27.796 17.600 -6.746 -0.478 0.050  C14  C6S 14 
C6S C15  C15  C 0 1 N N N N N N -13.764 -26.594 17.462 -5.808 -1.071 -1.003 C15  C6S 15 
C6S C16  C16  C 0 1 N N N N N N -13.154 -25.499 16.597 -4.378 -1.094 -0.457 C16  C6S 16 
C6S C17  C17  C 0 1 Y N N N N N -14.438 -22.377 14.053 2.741  -2.581 0.092  C17  C6S 17 
C6S C18  C18  C 0 1 Y N N N N N -15.756 -22.047 14.431 4.117  -2.569 0.218  C18  C6S 18 
C6S C19  C19  C 0 1 Y N N N N N -16.021 -20.895 15.201 4.799  -1.372 0.216  C19  C6S 19 
C6S C20  C20  C 0 1 Y N N N N N -14.939 -20.098 15.582 4.092  -0.176 0.092  C20  C6S 20 
C6S C21  C21  C 0 1 N N N N N N -15.056 -18.841 16.383 4.815  1.108  0.089  C21  C6S 21 
C6S O22  O22  O 0 1 N N N N N N -15.877 -18.761 17.307 4.202  2.151  -0.020 O22  C6S 22 
C6S O23  O23  O 0 1 N N N N N N -14.320 -17.866 16.101 6.158  1.125  0.208  O23  C6S 23 
C6S H01  H01  H 0 1 N N N N N N -12.331 -19.795 17.835 0.743  2.534  -1.747 H01  C6S 24 
C6S H07  H07  H 0 1 N N N N N N -10.048 -21.761 15.217 -0.169 -0.064 1.259  H07  C6S 25 
C6S H061 H061 H 0 0 N N N N N N -11.754 -22.821 13.698 0.286  -1.781 -1.219 H061 C6S 26 
C6S H062 H062 H 0 0 N N N N N N -11.527 -21.069 13.372 0.160  -2.307 0.473  H062 C6S 27 
C6S H17  H17  H 0 1 N N N N N N -14.251 -23.265 13.468 2.216  -3.525 0.096  H17  C6S 28 
C6S H08  H08  H 0 1 N N N N N N -12.288 -22.515 16.969 -1.709 -0.507 -1.238 H08  C6S 29 
C6S H11  H11  H 0 1 N N N N N N -11.767 -24.733 18.045 -3.971 0.943  -1.028 H11  C6S 30 
C6S H121 H121 H 0 0 N N N N N N -10.757 -26.797 16.036 -4.841 0.316  1.830  H121 C6S 31 
C6S H122 H122 H 0 0 N N N N N N -9.842  -26.111 17.421 -4.560 1.942  1.164  H122 C6S 32 
C6S H161 H161 H 0 0 N N N N N N -13.777 -24.596 16.676 -3.710 -1.516 -1.207 H161 C6S 33 
C6S H162 H162 H 0 0 N N N N N N -13.135 -25.841 15.552 -4.344 -1.704 0.445  H162 C6S 34 
C6S H131 H131 H 0 0 N N N N N N -10.821 -28.352 17.907 -6.973 1.371  1.131  H131 C6S 35 
C6S H132 H132 H 0 0 N N N N N N -11.425 -27.061 19.001 -6.339 1.559  -0.521 H132 C6S 36 
C6S H141 H141 H 0 0 N N N N N N -12.845 -28.333 16.640 -6.712 -1.088 0.952  H141 C6S 37 
C6S H142 H142 H 0 0 N N N N N N -13.268 -28.452 18.382 -7.764 -0.462 -0.339 H142 C6S 38 
C6S H151 H151 H 0 0 N N N N N N -14.711 -26.917 17.006 -6.122 -2.087 -1.240 H151 C6S 39 
C6S H152 H152 H 0 0 N N N N N N -13.961 -26.184 18.464 -5.842 -0.461 -1.906 H152 C6S 40 
C6S H18  H18  H 0 1 N N N N N N -16.573 -22.684 14.127 4.658  -3.498 0.319  H18  C6S 41 
C6S H19  H19  H 0 1 N N N N N N -17.030 -20.637 15.487 5.875  -1.360 0.311  H19  C6S 42 
C6S H23  H23  H 0 1 N N N N N N -14.513 -17.143 16.686 6.588  1.992  0.201  H23  C6S 43 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
C6S O01 B02  SING N N 1  
C6S B02 O03  SING N N 2  
C6S B02 C07  SING N N 3  
C6S O03 C04  SING N N 4  
C6S C04 C05  SING Y N 5  
C6S C04 C20  DOUB Y N 6  
C6S C05 C06  SING N N 7  
C6S C05 C17  DOUB Y N 8  
C6S C06 C07  SING N N 9  
C6S C07 N08  SING N N 10 
C6S N08 C09  SING N N 11 
C6S C09 O10  DOUB N N 12 
C6S C09 C11  SING N N 13 
C6S C11 C12  SING N N 14 
C6S C11 C16  SING N N 15 
C6S C12 C13  SING N N 16 
C6S C13 C14  SING N N 17 
C6S C14 C15  SING N N 18 
C6S C15 C16  SING N N 19 
C6S C17 C18  SING Y N 20 
C6S C18 C19  DOUB Y N 21 
C6S C19 C20  SING Y N 22 
C6S C20 C21  SING N N 23 
C6S C21 O22  DOUB N N 24 
C6S C21 O23  SING N N 25 
C6S O01 H01  SING N N 26 
C6S C07 H07  SING N N 27 
C6S C06 H061 SING N N 28 
C6S C06 H062 SING N N 29 
C6S C17 H17  SING N N 30 
C6S N08 H08  SING N N 31 
C6S C11 H11  SING N N 32 
C6S C12 H121 SING N N 33 
C6S C12 H122 SING N N 34 
C6S C16 H161 SING N N 35 
C6S C16 H162 SING N N 36 
C6S C13 H131 SING N N 37 
C6S C13 H132 SING N N 38 
C6S C14 H141 SING N N 39 
C6S C14 H142 SING N N 40 
C6S C15 H151 SING N N 41 
C6S C15 H152 SING N N 42 
C6S C18 H18  SING N N 43 
C6S C19 H19  SING N N 44 
C6S O23 H23  SING N N 45 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
C6S InChI            InChI                1.03  "InChI=1S/C16H20BNO5/c19-15(10-5-2-1-3-6-10)18-13-9-11-7-4-8-12(16(20)21)14(11)23-17(13)22/h4,7-8,10,13,22H,1-3,5-6,9H2,(H,18,19)(H,20,21)/t13-/m0/s1" 
C6S InChIKey         InChI                1.03  ZRHUJXRVIMMHFG-ZDUSSCGKSA-N                                                                                                                            
C6S SMILES_CANONICAL CACTVS               3.385 "OB1Oc2c(C[C@@H]1NC(=O)C3CCCCC3)cccc2C(O)=O"                                                                                                           
C6S SMILES           CACTVS               3.385 "OB1Oc2c(C[CH]1NC(=O)C3CCCCC3)cccc2C(O)=O"                                                                                                             
C6S SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "B1([C@H](Cc2cccc(c2O1)C(=O)O)NC(=O)C3CCCCC3)O"                                                                                                        
C6S SMILES           "OpenEye OEToolkits" 1.7.6 "B1(C(Cc2cccc(c2O1)C(=O)O)NC(=O)C3CCCCC3)O"                                                                                                            
# 
_pdbx_chem_comp_identifier.comp_id           C6S 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   1.7.6 
_pdbx_chem_comp_identifier.identifier        "(3R)-3-(cyclohexylcarbonylamino)-2-oxidanyl-3,4-dihydro-1,2-benzoxaborinine-8-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
C6S "Create component" 2015-12-08 EBI  
C6S "Initial release"  2016-08-17 RCSB 
C6S "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            C6S 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               B02 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
