data_01T
#

_chem_comp.id                                   01T
_chem_comp.name                                 "[5-(aminomethyl)-6-(2,2-dimethylpropyl)-2-ethyl-4-(4-methylphenyl)pyridin-3-yl]acetic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C22 H30 N2 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        TAK-100
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2010-08-06
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       354.486
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    01T
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3O95
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
01T  C5    C5    C  0  1  Y  N  N  20.194  31.731  32.357  -2.066  -0.041  -0.405  C5    01T   1  
01T  C6    C6    C  0  1  N  N  N  21.221  32.657  32.996  -3.322  -0.732  -0.871  C6    01T   2  
01T  C7    C7    C  0  1  N  N  N  22.322  33.131  32.033  -4.151  -1.155   0.343  C7    01T   3  
01T  C8    C8    C  0  1  N  N  N  23.076  34.318  32.607  -4.618   0.090   1.100  C8    01T   4  
01T  C10   C10   C  0  1  N  N  N  23.317  32.012  31.769  -5.370  -1.954  -0.125  C10   01T   5  
01T  C15   C15   C  0  1  Y  N  N  18.332  29.999  31.196   0.180   1.254   0.444  C15   01T   6  
01T  C17   C17   C  0  1  N  N  N  16.563  28.171  31.478   2.099   2.615  -0.277  C17   01T   7  
01T  C20   C20   C  0  1  Y  N  N  16.852  31.969  30.671   1.563  -0.823   0.203  C20   01T   8  
01T  C21   C21   C  0  1  Y  N  N  15.661  31.752  31.373   2.170  -1.010   1.443  C21   01T   9  
01T  C22   C22   C  0  1  Y  N  N  14.468  32.297  30.911   3.372  -1.683   1.526  C22   01T  10  
01T  C24   C24   C  0  1  N  N  N  13.191  33.673  29.244   5.286  -2.907   0.477  C24   01T  11  
01T  C26   C26   C  0  1  Y  N  N  16.857  32.756  29.522   2.171  -1.323  -0.947  C26   01T  12  
01T  O19   O19   O  0  1  N  N  N  16.351  28.550  32.648   3.216   3.338  -0.100  O19   01T  13  
01T  O18   O18   O  0  1  N  N  N  16.169  27.065  31.045   1.656   2.450  -1.389  O18   01T  14  
01T  C16   C16   C  0  1  N  N  N  17.320  29.069  30.536   1.397   2.009   0.911  C16   01T  15  
01T  C3    C3    C  0  1  Y  N  N  19.522  29.510  31.760  -1.042   1.888   0.341  C3    01T  16  
01T  C2    C2    C  0  1  N  N  N  19.838  28.021  31.751  -1.154   3.347   0.701  C2    01T  17  
01T  C1    C1    C  0  1  N  N  N  21.151  27.747  31.051  -0.891   4.200  -0.542  C1    01T  18  
01T  N4    N4    N  0  1  Y  N  N  20.412  30.387  32.328  -2.111   1.235  -0.073  N4    01T  19  
01T  C9    C9    C  0  1  N  N  N  21.798  33.605  30.695  -3.296  -2.024   1.268  C9    01T  20  
01T  C11   C11   C  0  1  Y  N  N  19.015  32.239  31.806  -0.887  -0.752  -0.326  C11   01T  21  
01T  C12   C12   C  0  1  N  N  N  18.715  33.733  31.835  -0.847  -2.211  -0.702  C12   01T  22  
01T  N13   N13   N  0  1  N  N  N  17.654  34.009  32.790  -0.398  -2.345  -2.095  N13   01T  23  
01T  C14   C14   C  0  1  Y  N  N  18.100  31.376  31.214   0.271  -0.100   0.108  C14   01T  24  
01T  C25   C25   C  0  1  Y  N  N  15.662  33.298  29.058   3.373  -1.995  -0.852  C25   01T  25  
01T  C23   C23   C  0  1  Y  N  N  14.475  33.075  29.754   3.974  -2.173   0.381  C23   01T  26  
01T  H6    H6    H  0  1  N  N  N  20.691  33.546  33.369  -3.904  -0.049  -1.489  H6    01T  27  
01T  H6A   H6A   H  0  1  N  N  N  21.703  32.112  33.821  -3.056  -1.613  -1.454  H6A   01T  28  
01T  H8    H8    H  0  1  N  N  N  23.856  34.635  31.899  -5.133   0.762   0.413  H8    01T  29  
01T  H8A   H8A   H  0  1  N  N  N  22.376  35.149  32.778  -5.299  -0.205   1.899  H8A   01T  30  
01T  H8B   H8B   H  0  1  N  N  N  23.543  34.030  33.560  -3.755   0.600   1.529  H8B   01T  31  
01T  H10   H10   H  0  1  N  N  N  24.096  32.369  31.079  -5.037  -2.840  -0.665  H10   01T  32  
01T  H10A  H10A  H  0  0  N  N  N  23.781  31.703  32.717  -5.961  -2.255   0.740  H10A  01T  33  
01T  H10B  H10B  H  0  0  N  N  N  22.794  31.155  31.320  -5.979  -1.334  -0.784  H10B  01T  34  
01T  H21   H21   H  0  1  N  N  N  15.668  31.160  32.276   1.701  -0.628   2.338  H21   01T  35  
01T  H22   H22   H  0  1  N  N  N  13.545  32.119  31.443   3.843  -1.828   2.487  H22   01T  36  
01T  H24   H24   H  0  1  N  N  N  13.048  34.669  29.688   6.108  -2.197   0.382  H24   01T  37  
01T  H24A  H24A  H  0  0  N  N  N  13.239  33.764  28.149   5.350  -3.410   1.442  H24A  01T  38  
01T  H24B  H24B  H  0  0  N  N  N  12.348  33.023  29.522   5.349  -3.645  -0.322  H24B  01T  39  
01T  H26   H26   H  0  1  N  N  N  17.781  32.944  28.995   1.702  -1.186  -1.910  H26   01T  40  
01T  HO19  HO19  H  0  0  N  N  N  15.865  27.881  33.115   3.631   3.706  -0.892  HO19  01T  41  
01T  H16   H16   H  0  1  N  N  N  16.584  29.697  30.012   1.092   2.801   1.596  H16   01T  42  
01T  H16A  H16A  H  0  0  N  N  N  17.869  28.426  29.833   2.074   1.326   1.424  H16A  01T  43  
01T  H2    H2    H  0  1  N  N  N  19.906  27.664  32.789  -2.156   3.553   1.077  H2    01T  44  
01T  H2A   H2A   H  0  1  N  N  N  19.034  27.489  31.222  -0.421   3.589   1.470  H2A   01T  45  
01T  H1    H1    H  0  1  N  N  N  21.353  26.666  31.060  -0.972   5.256  -0.282  H1    01T  46  
01T  H1A   H1A   H  0  1  N  N  N  21.093  28.101  30.011   0.111   3.995  -0.918  H1A   01T  47  
01T  H1B   H1B   H  0  1  N  N  N  21.962  28.276  31.573  -1.624   3.958  -1.311  H1B   01T  48  
01T  H9    H9    H  0  1  N  N  N  22.640  33.926  30.064  -2.381  -1.491   1.523  H9    01T  49  
01T  H9A   H9A   H  0  1  N  N  N  21.261  32.783  30.199  -3.854  -2.244   2.178  H9A   01T  50  
01T  H9B   H9B   H  0  1  N  N  N  21.112  34.451  30.849  -3.045  -2.955   0.761  H9B   01T  51  
01T  H12   H12   H  0  1  N  N  N  19.622  34.280  32.131  -0.155  -2.737  -0.045  H12   01T  52  
01T  H12A  H12A  H  0  0  N  N  N  18.397  34.059  30.834  -1.844  -2.640  -0.599  H12A  01T  53  
01T  HN13  HN13  H  0  0  N  N  N  17.463  34.991  32.803  -0.410  -3.311  -2.386  HN13  01T  54  
01T  HN1A  HN1A  H  0  0  N  N  N  16.828  33.513  32.523  -0.956  -1.774  -2.711  HN1A  01T  55  
01T  H25   H25   H  0  1  N  N  N  15.654  33.893  28.157   3.845  -2.383  -1.743  H25   01T  56  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
01T  C11  C5    DOUB  Y  N   1  
01T  N4   C5    SING  Y  N   2  
01T  C5   C6    SING  N  N   3  
01T  C7   C6    SING  N  N   4  
01T  C6   H6    SING  N  N   5  
01T  C6   H6A   SING  N  N   6  
01T  C9   C7    SING  N  N   7  
01T  C10  C7    SING  N  N   8  
01T  C7   C8    SING  N  N   9  
01T  C8   H8    SING  N  N  10  
01T  C8   H8A   SING  N  N  11  
01T  C8   H8B   SING  N  N  12  
01T  C10  H10   SING  N  N  13  
01T  C10  H10A  SING  N  N  14  
01T  C10  H10B  SING  N  N  15  
01T  C16  C15   SING  N  N  16  
01T  C15  C14   DOUB  Y  N  17  
01T  C15  C3    SING  Y  N  18  
01T  C16  C17   SING  N  N  19  
01T  O18  C17   DOUB  N  N  20  
01T  C17  O19   SING  N  N  21  
01T  C26  C20   DOUB  Y  N  22  
01T  C20  C14   SING  Y  N  23  
01T  C20  C21   SING  Y  N  24  
01T  C22  C21   DOUB  Y  N  25  
01T  C21  H21   SING  N  N  26  
01T  C23  C22   SING  Y  N  27  
01T  C22  H22   SING  N  N  28  
01T  C24  C23   SING  N  N  29  
01T  C24  H24   SING  N  N  30  
01T  C24  H24A  SING  N  N  31  
01T  C24  H24B  SING  N  N  32  
01T  C25  C26   SING  Y  N  33  
01T  C26  H26   SING  N  N  34  
01T  O19  HO19  SING  N  N  35  
01T  C16  H16   SING  N  N  36  
01T  C16  H16A  SING  N  N  37  
01T  C2   C3    SING  N  N  38  
01T  C3   N4    DOUB  Y  N  39  
01T  C1   C2    SING  N  N  40  
01T  C2   H2    SING  N  N  41  
01T  C2   H2A   SING  N  N  42  
01T  C1   H1    SING  N  N  43  
01T  C1   H1A   SING  N  N  44  
01T  C1   H1B   SING  N  N  45  
01T  C9   H9    SING  N  N  46  
01T  C9   H9A   SING  N  N  47  
01T  C9   H9B   SING  N  N  48  
01T  C14  C11   SING  Y  N  49  
01T  C11  C12   SING  N  N  50  
01T  C12  N13   SING  N  N  51  
01T  C12  H12   SING  N  N  52  
01T  C12  H12A  SING  N  N  53  
01T  N13  HN13  SING  N  N  54  
01T  N13  HN1A  SING  N  N  55  
01T  C25  C23   DOUB  Y  N  56  
01T  C25  H25   SING  N  N  57  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
01T  SMILES            ACDLabs               12.01  "O=C(O)Cc1c(nc(c(c1c2ccc(cc2)C)CN)CC(C)(C)C)CC"  
01T  SMILES_CANONICAL  CACTVS                3.370  "CCc1nc(CC(C)(C)C)c(CN)c(c2ccc(C)cc2)c1CC(O)=O"  
01T  SMILES            CACTVS                3.370  "CCc1nc(CC(C)(C)C)c(CN)c(c2ccc(C)cc2)c1CC(O)=O"  
01T  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "CCc1c(c(c(c(n1)CC(C)(C)C)CN)c2ccc(cc2)C)CC(=O)O"  
01T  SMILES            "OpenEye OEToolkits"  1.7.0  "CCc1c(c(c(c(n1)CC(C)(C)C)CN)c2ccc(cc2)C)CC(=O)O"  
01T  InChI             InChI                 1.03   "InChI=1S/C22H30N2O2/c1-6-18-16(11-20(25)26)21(15-9-7-14(2)8-10-15)17(13-23)19(24-18)12-22(3,4)5/h7-10H,6,11-13,23H2,1-5H3,(H,25,26)"  
01T  InChIKey          InChI                 1.03   HQVOROHHYWZJLD-UHFFFAOYSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
01T  "SYSTEMATIC NAME"  ACDLabs               12.01  "[5-(aminomethyl)-6-(2,2-dimethylpropyl)-2-ethyl-4-(4-methylphenyl)pyridin-3-yl]acetic acid"  
01T  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.0  "2-[5-(aminomethyl)-6-(2,2-dimethylpropyl)-2-ethyl-4-(4-methylphenyl)pyridin-3-yl]ethanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
01T  "Create component"      2010-08-06  RCSB  
01T  "Modify aromatic_flag"  2011-06-04  RCSB  
01T  "Modify descriptor"     2011-06-04  RCSB  
01T  "Modify synonyms"       2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     01T
_pdbx_chem_comp_synonyms.name        TAK-100
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
