data_ZBU
# 
_chem_comp.id                                    ZBU 
_chem_comp.name                                  "(S)-1'-(2',3'-DIHYDROXYPROPYL)-5-BROMO-URACIL" 
_chem_comp.type                                  "RNA LINKING" 
_chem_comp.pdbx_type                             ATOMN 
_chem_comp.formula                               "C7 H10 Br N2 O7 P" 
_chem_comp.mon_nstd_parent_comp_id               U 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-04-16 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        345.041 
_chem_comp.one_letter_code                       U 
_chem_comp.three_letter_code                     ZBU 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2XC6 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
ZBU O1P  O1P  O  0 1 N N N 2.267  13.914 -13.020 5.863  1.211  -1.464 O1P  ZBU 1  
ZBU P    P    P  0 1 N N N 2.993  12.812 -13.745 5.206  0.603  -0.125 P    ZBU 2  
ZBU O2P  O2P  O  0 1 N N N 4.225  12.224 -13.113 5.362  1.570  0.984  O2P  ZBU 3  
ZBU O3G  O3G  O  0 1 N N N 2.104  11.498 -13.762 3.641  0.320  -0.376 O3G  ZBU 4  
ZBU C3G  C3G  C  0 1 N N N 0.937  11.406 -12.976 2.756  -0.124 0.654  C3G  ZBU 5  
ZBU C2G  C2G  C  0 1 N N S 0.453  9.965  -13.040 1.348  -0.293 0.079  C2G  ZBU 6  
ZBU O2G  O2G  O  0 1 N N N -0.660 9.815  -12.169 1.353  -1.340 -0.893 O2G  ZBU 7  
ZBU C1G  C1G  C  0 1 N N N 0.040  9.654  -14.478 0.376  -0.647 1.206  C1G  ZBU 8  
ZBU N1   N1   N  0 1 N N N -0.478 8.244  -14.685 -0.972 -0.809 0.655  N1   ZBU 9  
ZBU C2   C2   C  0 1 N N N 0.345  7.186  -14.969 -1.376 -2.019 0.227  C2   ZBU 10 
ZBU O2   O2   O  0 1 N N N 1.531  7.238  -15.018 -0.617 -2.966 0.303  O2   ZBU 11 
ZBU N3   N3   N  0 1 N N N -0.289 5.968  -15.149 -2.609 -2.196 -0.282 N3   ZBU 12 
ZBU C6   C6   C  0 1 N N N -1.821 8.079  -14.653 -1.810 0.271  0.586  C6   ZBU 13 
ZBU C5   C5   C  0 1 N N N -2.404 6.904  -14.838 -3.053 0.122  0.079  C5   ZBU 14 
ZBU BR5  BR5  BR 0 0 N N N -4.253 6.823  -14.723 -4.229 1.599  -0.028 BR5  ZBU 15 
ZBU C4   C4   C  0 1 N N N -1.628 5.734  -15.106 -3.463 -1.157 -0.373 C4   ZBU 16 
ZBU O4   O4   O  0 1 N N N -2.077 4.609  -15.297 -4.579 -1.316 -0.835 O4   ZBU 17 
ZBU O3P  O3P  O  0 1 N Y N 3.216  12.987 -15.304 5.946  -0.775 0.257  O3P  ZBU 18 
ZBU H1P  H1P  H  0 1 N N N 2.114  13.654 -12.119 6.807  1.406  -1.385 H1P  ZBU 19 
ZBU H3P  H3P  H  0 1 N N N 2.374  13.022 -15.743 5.885  -1.457 -0.426 H3P  ZBU 20 
ZBU H3G1 H3G1 H  0 0 N N N 1.159  11.685 -11.935 3.105  -1.079 1.047  H3G1 ZBU 21 
ZBU H3G2 H3G2 H  0 0 N N N 0.163  12.090 -13.353 2.734  0.613  1.457  H3G2 ZBU 22 
ZBU H2G  H2G  H  0 1 N N N 1.250  9.273  -12.730 1.034  0.639  -0.392 H2G  ZBU 23 
ZBU HA   HA   H  0 1 N N N -0.356 9.782  -11.269 1.624  -2.200 -0.543 HA   ZBU 24 
ZBU H1G1 H1G1 H  0 0 N N N -0.761 10.354 -14.759 0.690  -1.579 1.677  H1G1 ZBU 25 
ZBU H1G2 H1G2 H  0 0 N N N 0.943  9.756  -15.098 0.372  0.152  1.947  H1G2 ZBU 26 
ZBU H6   H6   H  0 1 N N N -2.444 8.942  -14.469 -1.480 1.238  0.936  H6   ZBU 27 
ZBU H3   H3   H  0 1 N N N 0.298  5.179  -15.329 -2.884 -3.075 -0.586 H3   ZBU 28 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ZBU O1P P    SING N N 1  
ZBU P   O2P  DOUB N N 2  
ZBU P   O3G  SING N N 3  
ZBU P   O3P  SING N N 4  
ZBU O3G C3G  SING N N 5  
ZBU C3G C2G  SING N N 6  
ZBU C2G O2G  SING N N 7  
ZBU C2G C1G  SING N N 8  
ZBU C1G N1   SING N N 9  
ZBU N1  C2   SING N N 10 
ZBU N1  C6   SING N N 11 
ZBU C2  O2   DOUB N N 12 
ZBU C2  N3   SING N N 13 
ZBU N3  C4   SING N N 14 
ZBU C6  C5   DOUB N N 15 
ZBU C5  BR5  SING N N 16 
ZBU C5  C4   SING N N 17 
ZBU C4  O4   DOUB N N 18 
ZBU O1P H1P  SING N N 19 
ZBU O3P H3P  SING N N 20 
ZBU C3G H3G1 SING N N 21 
ZBU C3G H3G2 SING N N 22 
ZBU C2G H2G  SING N N 23 
ZBU O2G HA   SING N N 24 
ZBU C1G H1G1 SING N N 25 
ZBU C1G H1G2 SING N N 26 
ZBU C6  H6   SING N N 27 
ZBU N3  H3   SING N N 28 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
ZBU SMILES           ACDLabs              10.04 "O=P(O)(O)OCC(O)CN1C=C(Br)C(=O)NC1=O"                                                                                     
ZBU SMILES_CANONICAL CACTVS               3.352 "O[C@H](CO[P](O)(O)=O)CN1C=C(Br)C(=O)NC1=O"                                                                               
ZBU SMILES           CACTVS               3.352 "O[CH](CO[P](O)(O)=O)CN1C=C(Br)C(=O)NC1=O"                                                                                
ZBU SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "C1=C(C(=O)NC(=O)N1C[C@@H](COP(=O)(O)O)O)Br"                                                                              
ZBU SMILES           "OpenEye OEToolkits" 1.6.1 "C1=C(C(=O)NC(=O)N1CC(COP(=O)(O)O)O)Br"                                                                                   
ZBU InChI            InChI                1.03  "InChI=1S/C7H10BrN2O7P/c8-5-2-10(7(13)9-6(5)12)1-4(11)3-17-18(14,15)16/h2,4,11H,1,3H2,(H,9,12,13)(H2,14,15,16)/t4-/m0/s1" 
ZBU InChIKey         InChI                1.03  FBWWPOSBYNOMBJ-BYPYZUCNSA-N                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
ZBU "SYSTEMATIC NAME" ACDLabs              10.04 "(2S)-3-(5-bromo-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-2-hydroxypropyl dihydrogen phosphate" 
ZBU "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "[(2S)-3-(5-bromo-2,4-dioxo-pyrimidin-1-yl)-2-hydroxy-propyl] dihydrogen phosphate"             
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
ZBU "Create component"  2010-04-16 EBI  
ZBU "Modify descriptor" 2011-06-04 RCSB 
# 
