data_4BW
# 
_chem_comp.id                                    4BW 
_chem_comp.name                                  "2-amino-9-[(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-9-(6-amino-9H-purin-9-yl)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-yl]-1,9-dihydro-6H-purin-6-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H24 N10 O13 P2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         
;3',3' cGAMP; c-GMP-AMP; c[G(3',5')pA(3',5')p]
;
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-02-25 
_chem_comp.pdbx_modified_date                    2020-05-26 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        674.411 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     4BW 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4YAZ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
4BW OAC   O1  O 0 1 N N N 77.231 -23.289 81.075 9.602   1.177  2.545  OAC   4BW 1  
4BW CBC   C1  C 0 1 N N N 78.352 -22.749 80.368 9.014   0.561  1.673  CBC   4BW 2  
4BW NAT   N1  N 0 1 N N N 78.173 -22.094 79.198 9.596   -0.490 1.054  NAT   4BW 3  
4BW CBA   C2  C 0 1 N N N 79.215 -21.590 78.541 8.927   -1.175 0.084  CBA   4BW 4  
4BW NAA   N2  N 0 1 N N N 78.962 -20.890 77.272 9.544   -2.238 -0.526 NAA   4BW 5  
4BW NAS   N3  N 0 1 N N N 80.461 -21.678 78.977 7.709   -0.847 -0.283 NAS   4BW 6  
4BW CBG   C3  C 0 1 Y N N 80.715 -22.325 80.165 7.069   0.182  0.285  CBG   4BW 7  
4BW CBE   C4  C 0 1 Y N N 79.663 -22.889 80.904 7.702   0.925  1.286  CBE   4BW 8  
4BW NAR   N4  N 0 1 Y N N 80.208 -23.450 82.018 6.836   1.890  1.680  NAR   4BW 9  
4BW CAL   C5  C 0 1 Y N N 81.546 -23.260 81.968 5.737   1.789  0.992  CAL   4BW 10 
4BW NBQ   N5  N 0 1 Y N N 81.871 -22.582 80.875 5.833   0.745  0.118  NBQ   4BW 11 
4BW CBO   C6  C 0 1 N N R 83.188 -22.204 80.477 4.802   0.309  -0.827 CBO   4BW 12 
4BW CBI   C7  C 0 1 N N R 83.337 -20.867 80.402 3.977   -0.829 -0.206 CBI   4BW 13 
4BW OAG   O2  O 0 1 N N N 84.179 -20.480 79.324 4.202   -2.049 -0.915 OAG   4BW 14 
4BW OAX   O3  O 0 1 N N N 84.211 -22.689 81.527 3.919   1.395  -1.113 OAX   4BW 15 
4BW CBK   C8  C 0 1 N N R 84.801 -21.374 82.185 2.571   0.920  -1.163 CBK   4BW 16 
4BW CAN   C9  C 0 1 N N N 84.762 -21.530 83.693 1.631   1.957  -0.545 CAN   4BW 17 
4BW OAV   O4  O 0 1 N N N 83.409 -21.420 84.153 0.317   1.405  -0.440 OAV   4BW 18 
4BW PBR   P1  P 0 1 N N N 83.155 -21.085 85.726 -1.019  2.303  -0.485 PBR   4BW 19 
4BW "O3'" O5  O 0 1 N N N 83.326 -19.565 86.112 -2.211  1.459  -1.163 "O3'" 4BW 20 
4BW OAH   O6  O 0 1 N N N 83.833 -22.001 86.726 -0.743  3.631  -1.351 OAH   4BW 21 
4BW OAD   O7  O 0 1 N N N 81.674 -21.340 85.869 -1.404  2.683  0.892  OAD   4BW 22 
4BW CBM   C10 C 0 1 N N S 83.992 -20.405 81.826 2.510   -0.385 -0.354 CBM   4BW 23 
4BW OAZ   O8  O 0 1 N N N 84.734 -19.160 81.663 1.759   -1.373 -1.061 OAZ   4BW 24 
4BW PBS   P2  P 0 1 N N N 83.916 -17.783 81.540 0.537   -2.187 -0.400 PBS   4BW 25 
4BW OAI   O9  O 0 1 N N N 82.915 -17.743 80.395 0.851   -2.483 1.016  OAI   4BW 26 
4BW OAE   O10 O 0 1 N N N 84.945 -16.744 81.184 0.315   -3.566 -1.200 OAE   4BW 27 
4BW "O5'" O11 O 0 1 N N N 83.299 -17.308 82.946 -0.804  -1.300 -0.478 "O5'" 4BW 28 
4BW "C5'" C11 C 0 1 N N N 84.084 -17.534 84.147 -2.106  -1.868 -0.640 "C5'" 4BW 29 
4BW "C4'" C12 C 0 1 N N R 83.160 -17.453 85.298 -3.042  -0.828 -1.258 "C4'" 4BW 30 
4BW "O4'" O12 O 0 1 N N N 81.987 -16.340 84.993 -4.392  -1.296 -1.204 "O4'" 4BW 31 
4BW "C3'" C13 C 0 1 N N S 82.527 -18.578 85.363 -2.972  0.480  -0.454 "C3'" 4BW 32 
4BW "C2'" C14 C 0 1 N N R 81.170 -18.252 86.004 -4.436  0.936  -0.311 "C2'" 4BW 33 
4BW "O2'" O13 O 0 1 N N N 81.280 -18.254 87.329 -4.652  2.148  -1.037 "O2'" 4BW 34 
4BW "C1'" C15 C 0 1 N N R 80.887 -16.798 85.494 -5.269  -0.205 -0.916 "C1'" 4BW 35 
4BW N9    N6  N 0 1 Y N N 79.825 -16.731 84.517 -6.292  -0.631 0.041  N9    4BW 36 
4BW C8    C16 C 0 1 Y N N 79.955 -16.289 83.267 -6.189  -1.664 0.926  C8    4BW 37 
4BW N7    N7  N 0 1 Y N N 78.752 -16.346 82.647 -7.281  -1.759 1.627  N7    4BW 38 
4BW C5    C17 C 0 1 Y N N 77.822 -16.829 83.518 -8.152  -0.797 1.239  C5    4BW 39 
4BW C4    C18 C 0 1 Y N N 78.514 -17.074 84.726 -7.528  -0.061 0.217  C4    4BW 40 
4BW N3    N8  N 0 1 Y N N 77.816 -17.574 85.775 -8.179  0.955  -0.338 N3    4BW 41 
4BW C2    C19 C 0 1 Y N N 76.522 -17.834 85.717 -9.395  1.269  0.059  C2    4BW 42 
4BW N1    N9  N 0 1 Y N N 75.824 -17.619 84.585 -10.024 0.605  1.011  N1    4BW 43 
4BW C6    C20 C 0 1 Y N N 76.434 -17.129 83.491 -9.449  -0.422 1.628  C6    4BW 44 
4BW N6    N10 N 0 1 N N N 75.669 -16.898 82.276 -10.114 -1.109 2.629  N6    4BW 45 
4BW H1    H1  H 0 1 N N N 77.252 -21.988 78.824 10.495  -0.758 1.302  H1    4BW 46 
4BW H2    H2  H 0 1 N N N 79.723 -20.494 76.759 9.081   -2.735 -1.218 H2    4BW 47 
4BW H3    H3  H 0 1 N N N 78.029 -20.811 76.922 10.443  -2.492 -0.266 H3    4BW 48 
4BW H4    H4  H 0 1 N N N 82.248 -23.610 82.710 4.876   2.432  1.099  H4    4BW 49 
4BW H5    H5  H 0 1 N N N 83.434 -22.679 79.516 5.270   -0.038 -1.748 H5    4BW 50 
4BW H6    H6  H 0 1 N N N 82.362 -20.365 80.314 4.232   -0.951 0.847  H6    4BW 51 
4BW H7    H7  H 0 1 N N N 84.257 -19.533 79.307 5.120   -2.353 -0.895 H7    4BW 52 
4BW H8    H8  H 0 1 N N N 85.837 -21.230 81.844 2.285   0.729  -2.196 H8    4BW 53 
4BW H9    H9  H 0 1 N N N 85.164 -22.516 83.970 1.991   2.229  0.447  H9    4BW 54 
4BW H10   H10 H 0 1 N N N 85.372 -20.742 84.158 1.603   2.845  -1.178 H10   4BW 55 
4BW H11   H11 H 0 1 N N N 83.175 -22.504 87.192 -0.035  4.190  -1.000 H11   4BW 56 
4BW H12   H12 H 0 1 N N N 83.170 -20.261 82.542 2.070   -0.203 0.626  H12   4BW 57 
4BW H13   H13 H 0 1 N N N 84.713 -16.339 80.357 -0.407  -4.109 -0.856 H13   4BW 58 
4BW H14   H14 H 0 1 N N N 84.552 -18.529 84.109 -2.044  -2.737 -1.295 H14   4BW 59 
4BW H15   H15 H 0 1 N N N 84.865 -16.765 84.236 -2.493  -2.173 0.333  H15   4BW 60 
4BW H16   H16 H 0 1 N N N 83.691 -17.172 86.219 -2.758  -0.642 -2.293 H16   4BW 61 
4BW H17   H17 H 0 1 N N N 82.332 -18.981 84.358 -2.536  0.297  0.528  H17   4BW 62 
4BW H18   H18 H 0 1 N N N 80.397 -18.937 85.626 -4.689  1.074  0.740  H18   4BW 63 
4BW H19   H19 H 0 1 N N N 80.437 -18.052 87.717 -5.558  2.483  -0.982 H19   4BW 64 
4BW H20   H20 H 0 1 N N N 80.587 -16.206 86.371 -5.746  0.136  -1.835 H20   4BW 65 
4BW H21   H21 H 0 1 N N N 80.874 -15.940 82.819 -5.328  -2.308 1.029  H21   4BW 66 
4BW H22   H22 H 0 1 N N N 76.017 -18.224 86.588 -9.897  2.102  -0.413 H22   4BW 67 
4BW H23   H23 H 0 1 N N N 74.715 -17.155 82.428 -9.685  -1.859 3.070  H23   4BW 68 
4BW H24   H24 H 0 1 N N N 75.718 -15.930 82.030 -11.009 -0.841 2.889  H24   4BW 69 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
4BW NAA   CBA   SING N N 1  
4BW CBA   NAS   DOUB N N 2  
4BW CBA   NAT   SING N N 3  
4BW NAS   CBG   SING N N 4  
4BW NAT   CBC   SING N N 5  
4BW OAG   CBI   SING N N 6  
4BW CBG   NBQ   SING Y N 7  
4BW CBG   CBE   DOUB Y N 8  
4BW CBC   CBE   SING N N 9  
4BW CBC   OAC   DOUB N N 10 
4BW OAI   PBS   DOUB N N 11 
4BW CBI   CBO   SING N N 12 
4BW CBI   CBM   SING N N 13 
4BW CBO   NBQ   SING N N 14 
4BW CBO   OAX   SING N N 15 
4BW NBQ   CAL   SING Y N 16 
4BW CBE   NAR   SING Y N 17 
4BW OAE   PBS   SING N N 18 
4BW OAX   CBK   SING N N 19 
4BW PBS   OAZ   SING N N 20 
4BW PBS   "O5'" SING N N 21 
4BW OAZ   CBM   SING N N 22 
4BW CBM   CBK   SING N N 23 
4BW CAL   NAR   DOUB Y N 24 
4BW CBK   CAN   SING N N 25 
4BW N6    C6    SING N N 26 
4BW N7    C8    DOUB Y N 27 
4BW N7    C5    SING Y N 28 
4BW "O5'" "C5'" SING N N 29 
4BW C8    N9    SING Y N 30 
4BW C6    C5    DOUB Y N 31 
4BW C6    N1    SING Y N 32 
4BW C5    C4    SING Y N 33 
4BW CAN   OAV   SING N N 34 
4BW "C5'" "C4'" SING N N 35 
4BW OAV   PBR   SING N N 36 
4BW N9    C4    SING Y N 37 
4BW N9    "C1'" SING N N 38 
4BW N1    C2    DOUB Y N 39 
4BW C4    N3    DOUB Y N 40 
4BW "O4'" "C4'" SING N N 41 
4BW "O4'" "C1'" SING N N 42 
4BW "C4'" "C3'" SING N N 43 
4BW "C3'" "C2'" SING N N 44 
4BW "C3'" "O3'" SING N N 45 
4BW "C1'" "C2'" SING N N 46 
4BW C2    N3    SING Y N 47 
4BW PBR   OAD   DOUB N N 48 
4BW PBR   "O3'" SING N N 49 
4BW PBR   OAH   SING N N 50 
4BW "C2'" "O2'" SING N N 51 
4BW NAT   H1    SING N N 52 
4BW NAA   H2    SING N N 53 
4BW NAA   H3    SING N N 54 
4BW CAL   H4    SING N N 55 
4BW CBO   H5    SING N N 56 
4BW CBI   H6    SING N N 57 
4BW OAG   H7    SING N N 58 
4BW CBK   H8    SING N N 59 
4BW CAN   H9    SING N N 60 
4BW CAN   H10   SING N N 61 
4BW OAH   H11   SING N N 62 
4BW CBM   H12   SING N N 63 
4BW OAE   H13   SING N N 64 
4BW "C5'" H14   SING N N 65 
4BW "C5'" H15   SING N N 66 
4BW "C4'" H16   SING N N 67 
4BW "C3'" H17   SING N N 68 
4BW "C2'" H18   SING N N 69 
4BW "O2'" H19   SING N N 70 
4BW "C1'" H20   SING N N 71 
4BW C8    H21   SING N N 72 
4BW C2    H22   SING N N 73 
4BW N6    H23   SING N N 74 
4BW N6    H24   SING N N 75 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
4BW SMILES           ACDLabs              12.01 "O=C7NC(=Nc1c7ncn1C6OC5COP(=O)(O)OC4C(OC(n2c3ncnc(N)c3nc2)C4O)COP(=O)(OC5C6O)O)N"                                                                                                                                                                                                              
4BW InChI            InChI                1.03  "InChI=1S/C20H24N10O13P2/c21-14-8-15(24-3-23-14)29(4-25-8)18-10(31)12-6(40-18)1-38-45(36,37)43-13-7(2-39-44(34,35)42-12)41-19(11(13)32)30-5-26-9-16(30)27-20(22)28-17(9)33/h3-7,10-13,18-19,31-32H,1-2H2,(H,34,35)(H,36,37)(H2,21,23,24)(H3,22,27,28,33)/t6-,7-,10-,11-,12-,13-,18-,19-/m1/s1" 
4BW InChIKey         InChI                1.03  RFCBNSCSPXMEBK-INFSMZHSSA-N                                                                                                                                                                                                                                                                    
4BW SMILES_CANONICAL CACTVS               3.385 "NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@@H]4CO[P](O)(=O)O[C@H]5[C@@H](O)[C@@H](O[C@@H]5CO[P](O)(=O)O[C@H]4[C@H]3O)n6cnc7c(N)ncnc67"                                                                                                                                                                   
4BW SMILES           CACTVS               3.385 "NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH]4CO[P](O)(=O)O[CH]5[CH](O)[CH](O[CH]5CO[P](O)(=O)O[CH]4[CH]3O)n6cnc7c(N)ncnc67"                                                                                                                                                                                
4BW SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@H]4[C@H](O3)COP(=O)(O[C@@H]5[C@@H](COP(=O)(O4)O)O[C@H]([C@@H]5O)n6cnc7c6N=C(NC7=O)N)O)O)N"                                                                                                                                                                  
4BW SMILES           "OpenEye OEToolkits" 1.9.2 "c1nc(c2c(n1)n(cn2)C3C(C4C(O3)COP(=O)(OC5C(COP(=O)(O4)O)OC(C5O)n6cnc7c6N=C(NC7=O)N)O)O)N"                                                                                                                                                                                                      
# 
_pdbx_chem_comp_identifier.comp_id           4BW 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           ACDLabs 
_pdbx_chem_comp_identifier.program_version   12.01 
_pdbx_chem_comp_identifier.identifier        "2-amino-9-[(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-9-(6-amino-9H-purin-9-yl)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-yl]-1,9-dihydro-6H-purin-6-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
4BW "Create component" 2015-02-25 RCSB 
4BW "Initial release"  2015-04-15 RCSB 
4BW "Modify synonyms"  2015-07-16 RCSB 
4BW "Modify synonyms"  2020-05-26 PDBE 
# 
loop_
_pdbx_chem_comp_synonyms.ordinal 
_pdbx_chem_comp_synonyms.comp_id 
_pdbx_chem_comp_synonyms.name 
_pdbx_chem_comp_synonyms.provenance 
_pdbx_chem_comp_synonyms.type 
1 4BW 
;3',3' cGAMP
;
? ? 
2 4BW c-GMP-AMP               ? ? 
3 4BW "c[G(3',5')pA(3',5')p]" ? ? 
# 
