data_VBY
#

_chem_comp.id                                   VBY
_chem_comp.name                                 "5-(acryloylamino)-2-methyl-N-[(1R)-1-(naphthalen-1-yl)ethyl]benzamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C23 H22 N2 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-07-24
_chem_comp.pdbx_modified_date                   2020-07-31
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       358.433
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    VBY
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7JIW
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
VBY  C1   C1   C  0  1  N  N  N  49.760  31.543   0.394  -0.182  -1.743   0.132  C1   VBY   1  
VBY  C10  C2   C  0  1  Y  N  N  48.358  33.583   0.833  -2.502  -2.578  -0.216  C10  VBY   2  
VBY  C11  C3   C  0  1  Y  N  N  53.169  28.287  -1.726   4.742   1.649  -0.219  C11  VBY   3  
VBY  C12  C4   C  0  1  Y  N  N  54.352  28.837  -1.201   4.094   2.811   0.232  C12  VBY   4  
VBY  C13  C5   C  0  1  Y  N  N  50.725  33.860   0.215  -2.165  -0.250   0.327  C13  VBY   5  
VBY  C14  C6   C  0  1  Y  N  N  50.718  27.931  -1.508   4.734  -0.765  -0.553  C14  VBY   6  
VBY  C16  C7   C  0  1  N  N  N  47.197  32.652   1.120  -1.943  -3.953  -0.477  C16  VBY   7  
VBY  C17  C8   C  0  1  Y  N  N  48.229  34.970   0.906  -3.865  -2.367  -0.264  C17  VBY   8  
VBY  C18  C9   C  0  1  Y  N  N  53.179  27.586  -2.937   6.031   1.701  -0.777  C18  VBY   9  
VBY  C19  C10  C  0  1  Y  N  N  50.579  35.258   0.326  -3.535  -0.046   0.266  C19  VBY  10  
VBY  C20  C11  C  0  1  Y  N  N  50.778  27.227  -2.729   5.980  -0.675  -1.093  C20  VBY  11  
VBY  C21  C12  C  0  1  Y  N  N  49.328  35.788   0.654  -4.384  -1.109  -0.024  C21  VBY  12  
VBY  C22  C13  C  0  1  Y  N  N  51.985  27.054  -3.435   6.627   0.555  -1.203  C22  VBY  13  
VBY  C24  C14  C  0  1  N  N  N  51.419  37.133  -0.875  -5.125   1.662  -0.195  C24  VBY  14  
VBY  C25  C15  C  0  1  N  N  N  52.576  37.946  -1.378  -5.751   2.950   0.138  C25  VBY  15  
VBY  C27  C16  C  0  1  N  N  N  53.850  37.762  -1.025  -6.797   3.382  -0.561  C27  VBY  16  
VBY  C3   C17  C  0  1  Y  N  N  49.658  33.023   0.459  -1.642  -1.520   0.080  C3   VBY  17  
VBY  C4   C18  C  0  1  Y  N  N  53.161  29.755   0.749   2.203   1.492   0.887  C4   VBY  18  
VBY  C5   C19  C  0  1  Y  N  N  51.936  29.247   0.328   2.800   0.345   0.461  C5   VBY  19  
VBY  C6   C20  C  0  1  N  N  R  50.723  29.503   1.161   2.085  -0.975   0.593  C6   VBY  20  
VBY  C8   C21  C  0  1  Y  N  N  51.882  28.472  -0.972   4.085   0.398  -0.102  C8   VBY  21  
VBY  C9   C22  C  0  1  Y  N  N  54.346  29.561   0.009   2.848   2.721   0.773  C9   VBY  22  
VBY  N2   N1   N  0  1  N  N  N  50.594  30.929   1.234   0.637  -0.754   0.541  N2   VBY  23  
VBY  O7   O1   O  0  1  N  N  N  49.036  30.949  -0.422   0.280  -2.820  -0.189  O7   VBY  24  
VBY  N01  N2   N  0  1  N  N  N  51.612  36.063  -0.082  -4.065   1.224   0.513  N01  VBY  25  
VBY  O26  O2   O  0  1  N  N  N  50.318  37.549  -1.222  -5.564   0.991  -1.110  O26  VBY  26  
VBY  C01  C23  C  0  1  N  N  N  50.755  28.849   2.533   2.454  -1.624   1.929  C01  VBY  27  
VBY  H1   H1   H  0  1  N  N  N  55.282  28.702  -1.734   4.582   3.771   0.150  H1   VBY  28  
VBY  H2   H2   H  0  1  N  N  N  51.681  33.442  -0.064  -1.504   0.573   0.553  H2   VBY  29  
VBY  H3   H3   H  0  1  N  N  N  49.776  28.049  -0.993   4.246  -1.725  -0.470  H3   VBY  30  
VBY  H4   H4   H  0  1  N  N  N  47.187  32.396   2.190  -1.625  -4.024  -1.517  H4   VBY  31  
VBY  H5   H5   H  0  1  N  N  N  46.253  33.150   0.854  -1.089  -4.128   0.177  H5   VBY  32  
VBY  H6   H6   H  0  1  N  N  N  47.308  31.734   0.524  -2.711  -4.701  -0.280  H6   VBY  33  
VBY  H7   H7   H  0  1  N  N  N  47.276  35.410   1.158  -4.530  -3.189  -0.489  H7   VBY  34  
VBY  H8   H8   H  0  1  N  N  N  54.102  27.457  -3.483   6.545   2.647  -0.868  H8   VBY  35  
VBY  H9   H9   H  0  1  N  N  N  49.870  26.807  -3.136   6.476  -1.570  -1.439  H9   VBY  36  
VBY  H10  H10  H  0  1  N  N  N  49.210  36.860   0.714  -5.451  -0.950  -0.063  H10  VBY  37  
VBY  H11  H11  H  0  1  N  N  N  51.988  26.507  -4.366   7.617   0.598  -1.632  H11  VBY  38  
VBY  H12  H12  H  0  1  N  N  N  52.362  38.740  -2.078  -5.361   3.546   0.950  H12  VBY  39  
VBY  H13  H13  H  0  1  N  N  N  54.621  38.396  -1.437  -7.257   4.328  -0.316  H13  VBY  40  
VBY  H14  H14  H  0  1  N  N  N  54.109  36.980  -0.327  -7.187   2.786  -1.372  H14  VBY  41  
VBY  H15  H15  H  0  1  N  N  N  53.206  30.315   1.671   1.214   1.448   1.320  H15  VBY  42  
VBY  H16  H16  H  0  1  N  N  N  49.853  29.099   0.622   2.381  -1.632  -0.224  H16  VBY  43  
VBY  H17  H17  H  0  1  N  N  N  55.272  29.977   0.378   2.353   3.616   1.119  H17  VBY  44  
VBY  H18  H18  H  0  1  N  N  N  51.120  31.454   1.903   0.268   0.105   0.802  H18  VBY  45  
VBY  H19  H19  H  0  1  N  N  N  52.541  35.847   0.220  -3.669   1.791   1.194  H19  VBY  46  
VBY  H20  H20  H  0  1  N  N  N  49.828  29.088   3.075   3.531  -1.789   1.967  H20  VBY  47  
VBY  H21  H21  H  0  1  N  N  N  50.841  27.758   2.417   2.157  -0.967   2.746  H21  VBY  48  
VBY  H22  H22  H  0  1  N  N  N  51.619  29.227   3.099   1.937  -2.579   2.024  H22  VBY  49  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
VBY  C22  C18  DOUB  Y  N   1  
VBY  C22  C20  SING  Y  N   2  
VBY  C18  C11  SING  Y  N   3  
VBY  C20  C14  DOUB  Y  N   4  
VBY  C11  C12  DOUB  Y  N   5  
VBY  C11  C8   SING  Y  N   6  
VBY  C14  C8   SING  Y  N   7  
VBY  C25  C27  DOUB  N  N   8  
VBY  C25  C24  SING  N  N   9  
VBY  O26  C24  DOUB  N  N  10  
VBY  C12  C9   SING  Y  N  11  
VBY  C8   C5   DOUB  Y  N  12  
VBY  C24  N01  SING  N  N  13  
VBY  O7   C1   DOUB  N  N  14  
VBY  N01  C19  SING  N  N  15  
VBY  C9   C4   DOUB  Y  N  16  
VBY  C13  C19  DOUB  Y  N  17  
VBY  C13  C3   SING  Y  N  18  
VBY  C19  C21  SING  Y  N  19  
VBY  C5   C4   SING  Y  N  20  
VBY  C5   C6   SING  N  N  21  
VBY  C1   C3   SING  N  N  22  
VBY  C1   N2   SING  N  N  23  
VBY  C3   C10  DOUB  Y  N  24  
VBY  C21  C17  DOUB  Y  N  25  
VBY  C10  C17  SING  Y  N  26  
VBY  C10  C16  SING  N  N  27  
VBY  C6   N2   SING  N  N  28  
VBY  C6   C01  SING  N  N  29  
VBY  C12  H1   SING  N  N  30  
VBY  C13  H2   SING  N  N  31  
VBY  C14  H3   SING  N  N  32  
VBY  C16  H4   SING  N  N  33  
VBY  C16  H5   SING  N  N  34  
VBY  C16  H6   SING  N  N  35  
VBY  C17  H7   SING  N  N  36  
VBY  C18  H8   SING  N  N  37  
VBY  C20  H9   SING  N  N  38  
VBY  C21  H10  SING  N  N  39  
VBY  C22  H11  SING  N  N  40  
VBY  C25  H12  SING  N  N  41  
VBY  C27  H13  SING  N  N  42  
VBY  C27  H14  SING  N  N  43  
VBY  C4   H15  SING  N  N  44  
VBY  C6   H16  SING  N  N  45  
VBY  C9   H17  SING  N  N  46  
VBY  N2   H18  SING  N  N  47  
VBY  N01  H19  SING  N  N  48  
VBY  C01  H20  SING  N  N  49  
VBY  C01  H21  SING  N  N  50  
VBY  C01  H22  SING  N  N  51  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
VBY  SMILES            ACDLabs               12.01  "C(c1c(ccc(c1)NC(\C=C)=O)C)(NC(c3cccc2c3cccc2)C)=O"  
VBY  InChI             InChI                 1.03   "InChI=1S/C23H22N2O2/c1-4-22(26)25-18-13-12-15(2)21(14-18)23(27)24-16(3)19-11-7-9-17-8-5-6-10-20(17)19/h4-14,16H,1H2,2-3H3,(H,24,27)(H,25,26)/t16-/m1/s1"  
VBY  InChIKey          InChI                 1.03   QMJFETCLZITVFG-MRXNPFEDSA-N  
VBY  SMILES_CANONICAL  CACTVS                3.385  "C[C@@H](NC(=O)c1cc(NC(=O)C=C)ccc1C)c2cccc3ccccc23"  
VBY  SMILES            CACTVS                3.385  "C[CH](NC(=O)c1cc(NC(=O)C=C)ccc1C)c2cccc3ccccc23"  
VBY  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1ccc(cc1C(=O)N[C@H](C)c2cccc3c2cccc3)NC(=O)C=C"  
VBY  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1ccc(cc1C(=O)NC(C)c2cccc3c2cccc3)NC(=O)C=C"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
VBY  "SYSTEMATIC NAME"  ACDLabs               12.01  "5-(acryloylamino)-2-methyl-N-[(1R)-1-(naphthalen-1-yl)ethyl]benzamide"  
VBY  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "2-methyl-~{N}-[(1~{R})-1-naphthalen-1-ylethyl]-5-(prop-2-enoylamino)benzamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
VBY  "Create component"  2020-07-24  RCSB  
VBY  "Initial release"   2020-08-05  RCSB  
##
