data_6MZ
# 
_chem_comp.id                                    6MZ 
_chem_comp.name                                  "N6-METHYLADENOSINE-5'-MONOPHOSPHATE" 
_chem_comp.type                                  "RNA LINKING" 
_chem_comp.pdbx_type                             ATOMN 
_chem_comp.formula                               "C11 H16 N5 O7 P" 
_chem_comp.mon_nstd_parent_comp_id               A 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2007-03-21 
_chem_comp.pdbx_modified_date                    2018-03-14 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        361.248 
_chem_comp.one_letter_code                       A 
_chem_comp.three_letter_code                     6MZ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
6MZ C2     C2     C 0 1 Y N N 202.191 94.809 -2.784 4.850  -1.059 -0.961 C2     6MZ 1  
6MZ C4     C4     C 0 1 Y N N 200.999 93.902 -1.149 2.811  -0.211 -0.324 C4     6MZ 2  
6MZ C5     C5     C 0 1 Y N N 201.650 94.643 -0.171 3.452  0.951  0.140  C5     6MZ 3  
6MZ O1P    O1P    O 0 1 N N N 199.114 89.190 4.356  -6.250 0.244  0.138  O1P    6MZ 4  
6MZ O2P    O2P    O 0 1 N N N 200.745 91.209 4.442  -4.706 1.944  1.186  O2P    6MZ 5  
6MZ N9     N9     N 0 1 Y N N 200.080 93.130 -0.485 1.473  -0.028 -0.080 N9     6MZ 6  
6MZ N3     N3     N 0 1 Y N N 201.219 93.937 -2.480 3.543  -1.181 -0.862 N3     6MZ 7  
6MZ N1     N1     N 0 1 Y N N 202.913 95.597 -1.965 5.496  0.013  -0.540 N1     6MZ 8  
6MZ C6     C6     C 0 1 Y N N 202.675 95.549 -0.627 4.848  1.034  0.012  C6     6MZ 9  
6MZ N6     N6     N 0 1 N N N 203.426 96.361 0.159  5.534  2.154  0.449  N6     6MZ 10 
6MZ C9     C9     C 0 1 N N N 203.322 96.445 1.513  6.990  2.223  0.308  C9     6MZ 11 
6MZ N7     N7     N 0 1 Y N N 201.147 94.331 1.087  2.490  1.767  0.633  N7     6MZ 12 
6MZ C8     C8     C 0 1 Y N N 200.223 93.433 0.845  1.328  1.195  0.505  C8     6MZ 13 
6MZ "O5'"  "O5'"  O 0 1 N N N 199.377 90.741 2.391  -3.698 0.344  -0.486 "O5'"  6MZ 14 
6MZ "C5'"  "C5'"  C 0 1 N N N 198.283 90.142 1.666  -3.093 -0.612 0.388  "C5'"  6MZ 15 
6MZ "C4'"  "C4'"  C 0 1 N N R 198.433 90.365 0.182  -1.898 -1.260 -0.313 "C4'"  6MZ 16 
6MZ "O4'"  "O4'"  O 0 1 N N N 198.234 91.770 -0.112 -0.864 -0.284 -0.519 "O4'"  6MZ 17 
6MZ "C1'"  "C1'"  C 0 1 N N R 199.152 92.188 -1.101 0.398  -0.973 -0.391 "C1'"  6MZ 18 
6MZ "C2'"  "C2'"  C 0 1 N N R 199.837 90.933 -1.635 0.162  -1.942 0.796  "C2'"  6MZ 19 
6MZ "O2'"  "O2'"  O 0 1 N N N 199.113 90.419 -2.736 1.040  -3.066 0.719  "O2'"  6MZ 20 
6MZ "C3'"  "C3'"  C 0 1 N N S 199.796 90.041 -0.405 -1.311 -2.375 0.574  "C3'"  6MZ 21 
6MZ "O3'"  "O3'"  O 0 1 N N N 199.941 88.649 -0.671 -1.369 -3.633 -0.100 "O3'"  6MZ 22 
6MZ P      P      P 0 1 N N N 199.470 90.599 3.984  -4.985 1.218  -0.073 P      6MZ 23 
6MZ O3P    O3P    O 0 1 N Y N 198.265 91.505 4.523  -5.313 2.276  -1.242 O3P    6MZ 24 
6MZ H2     H2     H 0 1 N N N 202.428 94.891 -3.834 5.416  -1.868 -1.399 H2     6MZ 25 
6MZ H1P    H1P    H 0 1 N N N 199.807 88.818 4.889  -6.490 -0.265 -0.648 H1P    6MZ 26 
6MZ H8     H8     H 0 1 N N N 199.629 92.974 1.622  0.388  1.625  0.817  H8     6MZ 27 
6MZ "H1'"  "H1'"  H 0 1 N N N 198.622 92.680 -1.930 0.627  -1.527 -1.302 "H1'"  6MZ 28 
6MZ H9C1   H9C1   H 0 0 N N N 204.048 97.179 1.892  7.449  1.401  0.859  H9C1   6MZ 29 
6MZ H9C2   H9C2   H 0 0 N N N 202.304 96.763 1.783  7.257  2.146  -0.747 H9C2   6MZ 30 
6MZ "H5'1" "H5'1" H 0 0 N N N 198.267 89.061 1.868  -2.754 -0.111 1.295  "H5'1" 6MZ 31 
6MZ "H5'2" "H5'2" H 0 0 N N N 197.338 90.592 2.004  -3.822 -1.379 0.648  "H5'2" 6MZ 32 
6MZ "H4'"  "H4'"  H 0 1 N N N 197.673 89.768 -0.344 -2.212 -1.675 -1.271 "H4'"  6MZ 33 
6MZ "H3'"  "H3'"  H 0 1 N N N 200.573 90.374 0.299  -1.842 -2.425 1.525  "H3'"  6MZ 34 
6MZ "H2'"  "H2'"  H 0 1 N N N 200.880 91.159 -1.904 0.278  -1.425 1.748  "H2'"  6MZ 35 
6MZ HA     HA     H 0 1 N N N 199.545 89.639 -3.063 0.931  -3.701 1.440  HA     6MZ 36 
6MZ HB     HB     H 0 1 N Y N 200.802 88.484 -1.036 -1.012 -4.371 0.414  HB     6MZ 37 
6MZ H3P    H3P    H 0 1 N Y N 198.615 92.236 5.018  -6.079 2.838  -1.060 H3P    6MZ 38 
6MZ H6     H6     H 0 1 N N N 204.375 96.104 -0.021 5.050  2.893  0.850  H6     6MZ 39 
6MZ H9     H9     H 0 1 N N N 203.529 95.461 1.958  7.350  3.172  0.705  H9     6MZ 40 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
6MZ C4    C5     SING Y N 1  
6MZ C4    N9     SING Y N 2  
6MZ C2    N3     SING Y N 3  
6MZ C4    N3     DOUB Y N 4  
6MZ C2    N1     DOUB Y N 5  
6MZ C5    C6     DOUB Y N 6  
6MZ N1    C6     SING Y N 7  
6MZ C6    N6     SING N N 8  
6MZ N6    C9     SING N N 9  
6MZ C5    N7     SING Y N 10 
6MZ N9    C8     SING Y N 11 
6MZ N7    C8     DOUB Y N 12 
6MZ "O5'" "C5'"  SING N N 13 
6MZ "C1'" "H1'"  SING N N 14 
6MZ C9    H9C1   SING N N 15 
6MZ C9    H9C2   SING N N 16 
6MZ "C5'" "H5'1" SING N N 17 
6MZ "C5'" "H5'2" SING N N 18 
6MZ "C4'" "H4'"  SING N N 19 
6MZ "C3'" "H3'"  SING N N 20 
6MZ "C2'" "H2'"  SING N N 21 
6MZ "O2'" HA     SING N N 22 
6MZ "O3'" HB     SING N N 23 
6MZ O3P   H3P    SING N N 24 
6MZ "C5'" "C4'"  SING N N 25 
6MZ "C4'" "O4'"  SING N N 26 
6MZ N9    "C1'"  SING N N 27 
6MZ "O4'" "C1'"  SING N N 28 
6MZ "C1'" "C2'"  SING N N 29 
6MZ "C2'" "O2'"  SING N N 30 
6MZ "C4'" "C3'"  SING N N 31 
6MZ "C2'" "C3'"  SING N N 32 
6MZ "C3'" "O3'"  SING N N 33 
6MZ O1P   P      SING N N 34 
6MZ O2P   P      DOUB N N 35 
6MZ "O5'" P      SING N N 36 
6MZ P     O3P    SING N N 37 
6MZ C2    H2     SING N N 38 
6MZ O1P   H1P    SING N N 39 
6MZ C8    H8     SING N N 40 
6MZ N6    H6     SING N N 41 
6MZ C9    H9     SING N N 42 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
6MZ SMILES           ACDLabs              12.01 "c1nc2c(c(n1)NC)ncn2C3OC(COP(O)(=O)O)C(C3O)O"                                                                                                                          
6MZ InChI            InChI                1.03  "InChI=1S/C11H16N5O7P/c1-12-9-6-10(14-3-13-9)16(4-15-6)11-8(18)7(17)5(23-11)2-22-24(19,20)21/h3-5,7-8,11,17-18H,2H2,1H3,(H,12,13,14)(H2,19,20,21)/t5-,7-,8-,11-/m1/s1" 
6MZ InChIKey         InChI                1.03  WETVNPRPZIYMAC-IOSLPCCCSA-N                                                                                                                                            
6MZ SMILES_CANONICAL CACTVS               3.385 "CNc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]3O"                                                                                                        
6MZ SMILES           CACTVS               3.385 "CNc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O"                                                                                                              
6MZ SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CNc1c2c(ncn1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O"                                                                                                      
6MZ SMILES           "OpenEye OEToolkits" 1.7.6 "CNc1c2c(ncn1)n(cn2)C3C(C(C(O3)COP(=O)(O)O)O)O"                                                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
6MZ "SYSTEMATIC NAME" ACDLabs              12.01 
;N-methyladenosine 5'-(dihydrogen phosphate)
;
6MZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2R,3S,4R,5R)-5-[6-(methylamino)purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
6MZ "Create component"         2007-03-21 RCSB 
6MZ "Modify aromatic_flag"     2011-06-04 RCSB 
6MZ "Modify descriptor"        2011-06-04 RCSB 
6MZ "Modify parent residue"    2011-12-15 RCSB 
6MZ "Modify leaving atom flag" 2014-09-18 RCSB 
6MZ "Modify one letter code"   2018-03-14 RCSB 
# 
