data_SXZ
# 
_chem_comp.id                                    SXZ 
_chem_comp.name                                  "(2S)-4-({[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}sulfanyl)-2-[(3-methylbutanoyl)amino]butanoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H28 N6 O6 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-07-05 
_chem_comp.pdbx_modified_date                    2017-08-18 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        468.527 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     SXZ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5W8E 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
SXZ OXT   O1  O 0 1 N N N -33.600 27.767 -10.750 -6.491 2.438  -1.389 OXT   SXZ 1  
SXZ C     C1  C 0 1 N N N -32.866 26.794 -10.461 -5.426 2.641  -0.854 C     SXZ 2  
SXZ O     O2  O 0 1 N N N -33.328 25.737 -9.975  -4.935 3.888  -0.789 O     SXZ 3  
SXZ CA    C2  C 0 1 N N S -31.385 26.907 -10.705 -4.653 1.494  -0.256 CA    SXZ 4  
SXZ N     N1  N 0 1 N N N -31.071 27.282 -12.085 -5.399 0.248  -0.451 N     SXZ 5  
SXZ CB    C3  C 0 1 N N N -30.827 28.007 -9.788  -3.290 1.385  -0.942 CB    SXZ 6  
SXZ CG    C4  C 0 1 N N N -29.358 28.366 -10.013 -2.457 0.303  -0.252 CG    SXZ 7  
SXZ SD    S1  S 0 1 N N N -28.812 29.445 -8.719  -0.840 0.175  -1.065 SD    SXZ 8  
SXZ "C5'" C5  C 0 1 N N N -28.480 28.434 -7.306  -0.013 -1.136 -0.122 "C5'" SXZ 9  
SXZ "C4'" C6  C 0 1 N N S -28.933 29.108 -6.018  1.387  -1.369 -0.693 "C4'" SXZ 10 
SXZ "O4'" O3  O 0 1 N N N -30.353 29.289 -6.026  2.241  -0.240 -0.407 "O4'" SXZ 11 
SXZ "C1'" C7  C 0 1 N N R -30.881 28.963 -4.740  3.590  -0.744 -0.525 "C1'" SXZ 12 
SXZ "C2'" C8  C 0 1 N N R -29.964 27.863 -4.225  3.546  -2.145 0.126  "C2'" SXZ 13 
SXZ "O2'" O4  O 0 1 N N N -29.932 27.816 -2.795  4.381  -3.056 -0.591 "O2'" SXZ 14 
SXZ "C3'" C9  C 0 1 N N S -28.614 28.255 -4.795  2.064  -2.565 0.012  "C3'" SXZ 15 
SXZ "O3'" O5  O 0 1 N N N -27.889 29.054 -3.851  1.938  -3.749 -0.779 "O3'" SXZ 16 
SXZ N9    N2  N 0 1 Y N N -32.302 28.546 -4.848  4.523  0.124  0.197  N9    SXZ 17 
SXZ C8    C10 C 0 1 Y N N -32.819 27.609 -5.666  4.216  0.955  1.233  C8    SXZ 18 
SXZ N7    N3  N 0 1 Y N N -34.157 27.539 -5.465  5.285  1.578  1.636  N7    SXZ 19 
SXZ C5    C11 C 0 1 Y N N -34.474 28.450 -4.518  6.344  1.188  0.886  C5    SXZ 20 
SXZ C6    C12 C 0 1 Y N N -35.659 28.838 -3.904  7.711  1.513  0.861  C6    SXZ 21 
SXZ N6    N4  N 0 1 N N N -36.836 28.260 -4.231  8.237  2.429  1.755  N6    SXZ 22 
SXZ N1    N5  N 0 1 Y N N -35.634 29.816 -2.964  8.486  0.919  -0.040 N1    SXZ 23 
SXZ C2    C13 C 0 1 Y N N -34.483 30.409 -2.612  7.993  0.044  -0.897 C2    SXZ 24 
SXZ N3    N6  N 0 1 Y N N -33.329 30.053 -3.193  6.720  -0.291 -0.911 N3    SXZ 25 
SXZ C4    C14 C 0 1 Y N N -33.300 29.080 -4.139  5.869  0.246  -0.043 C4    SXZ 26 
SXZ C1    C15 C 0 1 N N N -30.837 26.390 -13.058 -6.357 -0.109 0.427  C1    SXZ 27 
SXZ O2    O6  O 0 1 N N N -30.873 25.175 -12.892 -6.602 0.602  1.379  O2    SXZ 28 
SXZ C3    C16 C 0 1 N N N -30.503 26.986 -14.415 -7.123 -1.390 0.226  C3    SXZ 29 
SXZ C7    C17 C 0 1 N N N -30.612 26.012 -15.589 -8.143 -1.557 1.355  C7    SXZ 30 
SXZ C9    C18 C 0 1 N N N -30.027 26.635 -16.853 -9.188 -0.442 1.266  C9    SXZ 31 
SXZ C10   C19 C 0 1 N N N -32.056 25.595 -15.854 -8.834 -2.915 1.221  C10   SXZ 32 
SXZ H1    H1  H 0 1 N N N -34.270 25.817 -9.879  -5.469 4.592  -1.183 H1    SXZ 33 
SXZ H2    H2  H 0 1 N N N -30.899 25.952 -10.455 -4.511 1.669  0.810  H2    SXZ 34 
SXZ H3    H3  H 0 1 N N N -31.029 28.255 -12.314 -5.203 -0.320 -1.213 H3    SXZ 35 
SXZ H4    H4  H 0 1 N N N -31.426 28.916 -9.945  -3.430 1.123  -1.990 H4    SXZ 36 
SXZ H5    H5  H 0 1 N N N -30.938 27.670 -8.747  -2.771 2.342  -0.873 H5    SXZ 37 
SXZ H6    H6  H 0 1 N N N -28.751 27.449 -10.007 -2.316 0.566  0.797  H6    SXZ 38 
SXZ H7    H7  H 0 1 N N N -29.248 28.872 -10.984 -2.975 -0.653 -0.320 H7    SXZ 39 
SXZ H8    H8  H 0 1 N N N -29.014 27.479 -7.417  0.066  -0.837 0.923  H8    SXZ 40 
SXZ H9    H9  H 0 1 N N N -27.398 28.244 -7.249  -0.592 -2.057 -0.194 H9    SXZ 41 
SXZ H10   H10 H 0 1 N N N -28.424 30.078 -5.922  1.334  -1.543 -1.768 H10   SXZ 42 
SXZ H11   H11 H 0 1 N N N -30.806 29.831 -4.069  3.876  -0.822 -1.574 H11   SXZ 43 
SXZ H12   H12 H 0 1 N N N -30.277 26.895 -4.643  3.851  -2.090 1.171  H12   SXZ 44 
SXZ H13   H13 H 0 1 N N N -30.788 27.569 -2.467  4.391  -3.951 -0.226 H13   SXZ 45 
SXZ H14   H14 H 0 1 N N N -28.047 27.360 -5.090  1.633  -2.718 1.002  H14   SXZ 46 
SXZ H15   H15 H 0 1 N N N -27.685 28.532 -3.084  2.346  -4.532 -0.383 H15   SXZ 47 
SXZ H16   H16 H 0 1 N N N -32.258 27.010 -6.368  3.230  1.078  1.657  H16   SXZ 48 
SXZ H17   H17 H 0 1 N N N -37.571 28.670 -3.690  7.661  2.855  2.409  H17   SXZ 49 
SXZ H18   H18 H 0 1 N N N -37.018 28.403 -5.204  9.182  2.645  1.728  H18   SXZ 50 
SXZ H19   H19 H 0 1 N N N -34.487 31.179 -1.855  8.659  -0.415 -1.613 H19   SXZ 51 
SXZ H20   H20 H 0 1 N N N -29.470 27.363 -14.378 -7.643 -1.357 -0.731 H20   SXZ 52 
SXZ H21   H21 H 0 1 N N N -31.192 27.823 -14.600 -6.432 -2.233 0.234  H21   SXZ 53 
SXZ H22   H22 H 0 1 N N N -30.030 25.111 -15.346 -7.633 -1.502 2.316  H22   SXZ 54 
SXZ H23   H23 H 0 1 N N N -28.986 26.937 -16.666 -9.914 -0.561 2.070  H23   SXZ 55 
SXZ H24   H24 H 0 1 N N N -30.054 25.899 -17.670 -8.695 0.525  1.361  H24   SXZ 56 
SXZ H25   H25 H 0 1 N N N -30.620 27.518 -17.135 -9.698 -0.498 0.305  H25   SXZ 57 
SXZ H26   H26 H 0 1 N N N -32.481 25.145 -14.945 -8.090 -3.709 1.284  H26   SXZ 58 
SXZ H27   H27 H 0 1 N N N -32.647 26.479 -16.136 -9.561 -3.034 2.025  H27   SXZ 59 
SXZ H28   H28 H 0 1 N N N -32.081 24.860 -16.672 -9.344 -2.971 0.259  H28   SXZ 60 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
SXZ C9    C7    SING N N 1  
SXZ C10   C7    SING N N 2  
SXZ C7    C3    SING N N 3  
SXZ C3    C1    SING N N 4  
SXZ C1    O2    DOUB N N 5  
SXZ C1    N     SING N N 6  
SXZ N     CA    SING N N 7  
SXZ OXT   C     DOUB N N 8  
SXZ CA    C     SING N N 9  
SXZ CA    CB    SING N N 10 
SXZ C     O     SING N N 11 
SXZ CG    CB    SING N N 12 
SXZ CG    SD    SING N N 13 
SXZ SD    "C5'" SING N N 14 
SXZ "C5'" "C4'" SING N N 15 
SXZ "O4'" "C4'" SING N N 16 
SXZ "O4'" "C1'" SING N N 17 
SXZ "C4'" "C3'" SING N N 18 
SXZ C8    N7    DOUB Y N 19 
SXZ C8    N9    SING Y N 20 
SXZ N7    C5    SING Y N 21 
SXZ N9    "C1'" SING N N 22 
SXZ N9    C4    SING Y N 23 
SXZ "C3'" "C2'" SING N N 24 
SXZ "C3'" "O3'" SING N N 25 
SXZ "C1'" "C2'" SING N N 26 
SXZ C5    C4    DOUB Y N 27 
SXZ C5    C6    SING Y N 28 
SXZ N6    C6    SING N N 29 
SXZ "C2'" "O2'" SING N N 30 
SXZ C4    N3    SING Y N 31 
SXZ C6    N1    DOUB Y N 32 
SXZ N3    C2    DOUB Y N 33 
SXZ N1    C2    SING Y N 34 
SXZ O     H1    SING N N 35 
SXZ CA    H2    SING N N 36 
SXZ N     H3    SING N N 37 
SXZ CB    H4    SING N N 38 
SXZ CB    H5    SING N N 39 
SXZ CG    H6    SING N N 40 
SXZ CG    H7    SING N N 41 
SXZ "C5'" H8    SING N N 42 
SXZ "C5'" H9    SING N N 43 
SXZ "C4'" H10   SING N N 44 
SXZ "C1'" H11   SING N N 45 
SXZ "C2'" H12   SING N N 46 
SXZ "O2'" H13   SING N N 47 
SXZ "C3'" H14   SING N N 48 
SXZ "O3'" H15   SING N N 49 
SXZ C8    H16   SING N N 50 
SXZ N6    H17   SING N N 51 
SXZ N6    H18   SING N N 52 
SXZ C2    H19   SING N N 53 
SXZ C3    H20   SING N N 54 
SXZ C3    H21   SING N N 55 
SXZ C7    H22   SING N N 56 
SXZ C9    H23   SING N N 57 
SXZ C9    H24   SING N N 58 
SXZ C9    H25   SING N N 59 
SXZ C10   H26   SING N N 60 
SXZ C10   H27   SING N N 61 
SXZ C10   H28   SING N N 62 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
SXZ SMILES           ACDLabs              12.01 "O=C(O)C(CCSCC1C(C(C(O1)n2c3c(nc2)c(ncn3)N)O)O)NC(=O)CC(C)C" 
SXZ InChI            InChI                1.03  
"InChI=1S/C19H28N6O6S/c1-9(2)5-12(26)24-10(19(29)30)3-4-32-6-11-14(27)15(28)18(31-11)25-8-23-13-16(20)21-7-22-17(13)25/h7-11,14-15,18,27-28H,3-6H2,1-2H3,(H,24,26)(H,29,30)(H2,20,21,22)/t10-,11+,14+,15+,18+/m0/s1" 
SXZ InChIKey         InChI                1.03  DHVHVJZUMVOUEH-MBRXSIFGSA-N 
SXZ SMILES_CANONICAL CACTVS               3.385 "CC(C)CC(=O)N[C@@H](CCSC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23)C(O)=O" 
SXZ SMILES           CACTVS               3.385 "CC(C)CC(=O)N[CH](CCSC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23)C(O)=O" 
SXZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC(C)CC(=O)N[C@@H](CCSC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)O)C(=O)O" 
SXZ SMILES           "OpenEye OEToolkits" 2.0.6 "CC(C)CC(=O)NC(CCSCC1C(C(C(O1)n2cnc3c2ncnc3N)O)O)C(=O)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
SXZ "SYSTEMATIC NAME" ACDLabs              12.01 "(2S)-4-({[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}sulfanyl)-2-[(3-methylbutanoyl)amino]butanoic acid (non-preferred name)" 
SXZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S})-4-[[(2~{S},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl]-2-(3-methylbutanoylamino)butanoic acid"                    
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
SXZ "Create component" 2017-07-05 RCSB 
SXZ "Initial release"  2017-08-23 RCSB 
# 
